Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ANKRD39	Gene	0	14.21	9.69	11.23	11.94	24.02	8.84	15.80	12.51	15.26	10.71	6.47	7.25	8.78	9.03	14.56	16.73	14.44	6.94	13.14	11.12	9.17	20.80	9.97	11.98	7.43	8.96	4.17	6.24	6.41
2	393537	Transcript	0	33.39	25.63	18.68	25.86	49.84	27.11	47.78	34.05	52.96	25.47	15.67	14.75	22.10	15.42	30.42	24.14	20.05	17.18	29.31	32.73	23.50	47.49	22.86	31.91	18.08	18.57	14.13	13.31	12.75
3	443120	Transcript	0	0.31	0.50	0.69	0.06	1.84	0.37	0.09	0.19	0.53	0.53	0.12	0.22	0.06	0.57	0.72	1.32	1.53	0.30	0.75	0.17	0.98	0.11	0.29	1.07	0.25	0.27	0.03	0.49	0.18
4	ER1a	ExonRegion	0	6.77	2.80	3.07	6.24	15.31	2.13	2.73	2.02	2.74	1.46	0.00	0.36	1.66	0.54	3.55	4.41	0.67	4.23	0.22	6.79	1.53	7.94	2.47	1.44	0.49	3.43	0.45	0.97	1.47
5	E1_Ab	KnownBoundary	0	35.98	14.54	12.86	29.12	76.04	12.51	13.67	9.80	10.81	7.83	0.00	1.51	9.08	2.95	19.93	22.26	1.24	33.91	0.00	33.49	7.66	48.81	11.18	7.96	1.86	16.35	11.78	4.27	6.44
6	ER1b	ExonRegion	0	57.30	11.26	58.13	122.98	229.98	19.68	42.94	29.90	25.66	21.40	20.14	16.38	35.54	14.05	45.25	63.33	32.93	25.28	23.38	28.17	11.73	99.91	48.89	23.13	21.80	46.43	15.55	27.28	33.49
7	E1a_E2a	KnownJunction	0	24.07	22.01	114.68	110.87	272.34	0.00	130.56	45.19	37.18	20.65	13.54	9.22	18.63	23.42	40.66	77.57	24.67	9.25	137.57	38.37	9.02	41.28	46.49	10.29	20.76	27.89	39.21	28.13	21.46
8	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	27.41	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	2.13	0.00	0.00	1.06	0.00	16.18	7.28	1.56	0.00	0.00	2.69	0.00	0.00	6.86	0.00	0.00
9	E2_Aa	NovelBoundary	0	2.30	0.00	2.17	10.78	20.34	3.80	2.92	1.89	3.99	0.00	4.84	0.00	0.00	1.06	0.00	0.00	7.90	0.00	8.09	5.95	1.56	2.19	0.00	0.00	0.00	0.00	0.00	8.00	1.98
10	ER2a	ExonRegion	0	98.79	37.24	68.87	43.45	83.30	25.97	79.95	63.84	49.29	45.67	16.35	21.41	43.30	34.73	64.51	70.76	36.43	37.08	48.96	57.27	22.23	185.21	42.53	57.83	35.71	41.95	13.16	20.85	32.57
11	E2a_E3a	KnownJunction	0	64.47	57.20	18.24	41.84	42.00	52.14	56.36	45.64	80.70	70.62	27.90	47.11	68.27	45.60	96.27	173.19	55.82	36.99	24.28	57.06	46.97	82.16	72.25	56.82	47.28	73.30	0.00	31.59	49.75
12	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	6.11	0.00
13	E3_Aa	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	1.42	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	3.37	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	77.64	47.92	65.27	70.72	145.30	39.35	109.22	78.55	73.15	57.50	48.68	52.01	62.55	66.25	79.56	95.80	81.62	44.99	76.89	72.36	33.47	122.03	76.49	49.10	45.85	64.99	26.42	46.43	47.98
15	E3_Da	NovelBoundary	0	2.24	0.00	1.15	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	3.48	8.37	3.82	15.49	0.00	8.09	0.00	2.05	0.00	2.17	0.00	0.00	0.00	1.99	0.00	0.00
16	E3a_E4a	KnownJunction	0	95.85	73.29	100.71	135.89	201.46	48.15	127.76	131.33	118.58	76.94	39.04	66.99	66.36	77.06	70.96	111.69	97.67	65.50	40.46	83.77	46.77	180.32	70.03	53.59	49.78	42.83	8.40	55.04	53.71
17	E3a_E5a	NovelJunction	0	0.00	0.00	2.64	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.92	2.33	0.00	0.00	0.00	3.86	0.00
18	Ix	Intron	0	1.83	2.62	1.07	1.75	1.04	4.48	1.54	0.90	3.19	3.03	2.25	0.43	0.73	1.56	4.81	2.73	5.82	1.15	3.70	1.21	3.35	0.77	0.17	4.26	2.35	1.63	0.28	0.94	0.69
19	Ix_SR1	SilentIntronRegion	0	1.94	2.78	1.08	1.62	1.10	4.70	1.56	0.95	3.11	3.12	2.34	0.46	0.73	1.51	4.64	2.89	6.07	1.17	3.92	1.19	3.55	0.81	0.17	4.45	2.49	1.67	0.30	1.00	0.61
20	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.93	3.97	0.00	0.76	1.12	0.00	4.67	1.60	0.66	0.00	0.72	2.35	7.91	0.00	1.61	0.83	0.00	1.53	0.00	0.00	0.00	1.01	0.00	0.87	0.00	0.00	2.09
21	ER4a	ExonRegion	0	96.91	61.29	82.32	81.06	159.49	49.93	110.80	106.30	75.73	67.78	42.02	48.03	62.21	52.89	67.02	72.92	75.54	40.98	78.17	74.48	42.83	154.52	68.55	56.94	48.39	46.65	25.84	27.26	34.27
22	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4b	ExonRegion	0	60.00	48.45	34.30	45.47	84.37	52.09	92.84	66.07	103.18	49.48	31.35	29.14	42.53	30.31	57.29	43.87	39.43	30.13	58.39	58.67	45.47	87.05	43.25	62.37	35.66	33.72	27.82	25.66	24.02
25	E4_Db	NovelBoundary	0	5.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.62	2.04	0.00	0.00	0.00	0.00	0.00	3.37	6.55	0.00	0.00	0.00	1.93	0.00	0.00	2.39	0.00	0.00	0.00	2.02	0.00
26	Ix_AR1	ActiveIntronRegion	0	0.85	0.63	0.81	0.00	0.69	0.14	0.40	0.27	0.87	1.18	0.45	0.15	0.00	0.00	3.12	1.84	2.22	0.38	0.32	0.62	1.81	0.69	0.28	0.61	0.50	0.75	0.00	0.65	0.93
27	Ix_SR1	SilentIntronRegion	0	0.76	0.00	0.02	0.00	0.51	0.25	0.00	0.98	2.19	0.85	0.21	0.22	0.46	0.32	5.37	0.44	2.83	0.00	0.57	0.65	0.25	1.54	0.00	0.44	0.51	0.28	0.00	0.00	0.95
28	Ix_SR2	SilentIntronRegion	0	0.00	0.89	0.37	0.00	0.00	0.82	0.00	0.43	2.28	1.07	0.18	1.12	0.67	0.37	1.16	3.51	8.26	0.22	0.47	0.78	2.03	1.60	0.00	3.39	0.57	0.53	0.14	0.87	0.45
29	Ix_AR2	ActiveIntronRegion	0	0.00	2.39	0.63	0.00	0.00	1.02	0.50	0.20	1.26	0.72	0.00	1.00	0.00	0.56	0.68	3.43	4.35	0.13	1.20	0.41	2.78	0.45	0.00	1.55	0.65	1.46	0.00	0.95	0.01
30	Ix_AR1	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	4.22	0.08	2.73	0.00	0.00	2.73	0.00	0.00	0.00	0.00	0.00	0.00	4.89	1.34
31	ER5a	ExonRegion	0	0.09	0.58	3.72	0.15	7.56	0.84	0.30	0.43	0.49	2.03	0.04	0.19	0.09	0.91	1.33	0.93	4.72	1.26	0.25	0.36	1.09	0.65	1.16	1.08	0.36	0.96	0.00	1.87	0.02
32	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER6a	ExonRegion	0	0.00	0.00	1.04	0.00	6.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.00	1.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.32	0.00
34	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	Ix	Intron	0	0.00	0.00	1.73	2.47	0.00	0.95	1.39	0.63	1.55	0.00	1.23	0.00	0.00	0.94	1.89	3.42	3.09	2.66	0.00	0.00	0.00	0.62	0.00	1.48	0.49	1.62	0.00	0.56	0.46
36	Ix_SR1	SilentIntronRegion	0	0.00	0.00	1.74	2.49	0.00	0.95	1.40	0.64	1.56	0.00	1.24	0.00	0.00	0.94	1.90	3.44	3.11	2.67	0.00	0.00	0.00	0.63	0.00	1.49	0.50	1.64	0.00	0.57	0.47
37	ER7a	ExonRegion	0	0.00	0.14	0.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.16	0.00	0.22	0.23	0.00	0.00	0.00	0.08	0.00	0.19	0.00	0.01	0.00	0.00	0.00	0.00
38	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	Ix	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.87	0.00	0.74	0.00	0.00	0.00	1.49	3.58	1.16	3.83	0.00	0.00	0.00	0.00	2.58	0.86	0.00	0.00	0.00	0.00
40	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.75	0.00	0.00	0.00	1.49	3.67	1.18	3.93	0.00	0.00	0.00	0.00	2.64	0.88	0.00	0.00	0.00	0.00
41	ER8a	ExonRegion	0	0.82	0.96	0.03	0.00	2.52	0.00	0.00	0.78	0.53	0.00	0.00	0.00	0.00	1.53	0.00	4.01	2.36	0.47	1.65	0.00	3.70	0.00	0.93	4.91	0.66	0.00	0.00	0.15	0.69
42	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	Ix	Intron	0	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.63	0.00	0.00	0.00	0.49	0.00	1.73	1.34	2.24	1.57	0.00	0.00	1.60	1.35	0.00	0.00	1.07	1.18	0.00	1.22	0.00
44	Ix_SR1	SilentIntronRegion	0	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.64	0.00	0.00	0.00	0.49	0.00	1.76	1.36	2.27	1.59	0.00	0.00	1.63	1.37	0.00	0.00	1.09	1.17	0.00	1.24	0.00
45	ER9a	ExonRegion	0	2.20	3.32	1.96	0.42	1.50	2.88	0.59	0.71	4.32	3.30	1.15	1.99	0.54	3.12	5.86	8.03	7.68	1.26	4.49	1.33	4.91	0.42	0.58	4.71	1.42	1.75	0.29	1.59	1.08