Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RPIA	Gene	0	188.05	259.26	311.27	276.59	240.74	303.77	286.45	212.87	330.07	222.35	293.02	304.42	401.75	80.86	269.07	192.61	196.16	211.69	282.07	267.16	511.36	216.02	172.92	204.00	240.88	315.43	335.78	215.52	221.42
2	283646	Transcript	0	253.49	241.37	439.51	292.55	219.94	303.44	323.51	319.06	239.91	243.27	310.29	407.40	468.72	108.29	186.79	171.21	284.76	259.45	272.74	290.49	492.07	304.96	213.33	219.22	293.71	513.80	358.47	308.34	253.40
3	IG6_AR3	ActiveIntergenicRegion	0	11.91	4.36	12.47	41.89	8.90	10.75	4.18	6.56	6.83	2.94	6.08	4.69	3.60	4.47	14.90	18.15	15.73	15.36	5.62	9.02	8.12	2.37	5.66	1.93	9.18	18.86	10.79	12.93	27.42
4	ER1a	ExonRegion	0	49.55	26.05	95.06	122.90	91.91	50.47	66.17	43.83	29.88	39.79	26.53	74.53	76.43	19.49	24.18	58.06	54.27	68.48	30.10	36.57	88.54	74.25	48.37	22.37	33.03	100.13	36.63	48.80	57.92
5	E1a_E2a	KnownJunction	0	147.58	91.13	122.16	109.57	125.41	78.00	102.24	141.63	82.89	94.83	89.49	171.14	169.44	62.59	78.53	86.21	105.57	141.27	48.55	122.89	154.79	150.86	88.06	72.62	108.92	157.58	130.11	102.17	90.56
6	E1a_E4a	NovelJunction	0	3.01	0.00	5.23	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	5.12	1.94	0.00	0.00	0.00	0.00	0.00	0.00	6.45	0.00	0.00	2.41	0.00	1.55	0.00	2.53	0.00	0.00
7	ER2a	ExonRegion	0	226.79	153.04	340.50	196.72	157.20	177.90	224.57	273.72	149.58	167.62	146.56	262.42	330.14	88.25	94.84	133.38	173.74	199.99	134.74	250.20	340.51	271.24	132.74	147.65	229.14	265.86	156.61	202.66	140.36
8	E2_Da	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E2a_E3a	KnownJunction	0	251.10	222.60	457.69	268.11	205.58	289.14	319.37	355.18	226.23	181.11	183.20	330.23	417.99	83.29	150.88	167.07	230.40	374.76	266.83	365.36	466.40	329.82	187.44	173.58	321.27	441.33	177.27	232.21	193.29
10	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	219.29	223.20	445.08	304.52	207.36	290.40	390.12	327.68	185.66	225.69	282.78	402.23	464.70	107.89	141.62	174.58	296.37	307.86	275.91	248.95	421.29	315.80	277.02	174.13	284.18	653.52	290.92	343.56	247.10
13	E3a_E4a	KnownJunction	0	174.83	195.36	375.32	260.77	229.16	189.38	288.99	229.82	134.39	212.27	319.19	384.60	368.28	106.71	68.77	137.77	304.82	163.75	283.24	192.36	313.22	271.48	270.48	194.76	190.60	552.22	291.38	354.06	238.52
14	E3a_E5a	NovelJunction	0	13.45	0.00	0.00	0.00	29.33	3.72	0.00	0.00	0.00	8.71	1.33	7.59	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.85	0.00	2.51	0.00	0.00	0.00	0.00	1.71	0.00
15	E3a_E6a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E4_Aa	NovelBoundary	0	0.00	0.00	1.37	0.00	14.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	232.17	186.31	442.23	309.33	225.66	244.85	292.32	316.79	149.80	223.28	327.85	436.46	432.98	127.97	105.57	156.57	328.92	201.37	223.95	260.13	381.63	283.57	272.05	219.38	220.50	597.66	337.61	388.14	263.13
18	E4_Da	NovelBoundary	0	10.74	0.00	4.14	0.00	22.11	8.56	0.00	0.00	2.62	2.04	3.99	3.07	3.73	1.86	0.00	3.52	0.00	4.62	0.00	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	6.11	2.05
19	E4a_E5a	KnownJunction	0	269.39	139.80	526.88	386.52	246.26	272.41	355.76	432.71	226.66	241.55	332.19	432.34	479.54	123.17	185.77	138.31	316.68	206.00	178.03	329.72	475.07	294.04	212.86	265.64	282.28	568.87	367.46	356.44	295.67
20	E4a_E6a	NovelJunction	0	2.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	0.00	0.00	4.22	0.00
21	I4	Intron	0	5.52	1.04	2.64	1.15	4.25	4.47	1.04	1.01	4.04	3.21	1.92	3.75	2.00	1.21	2.22	3.56	2.79	3.73	2.26	1.88	6.75	0.17	0.41	1.45	0.87	0.91	2.83	5.51	1.36
22	I4_SR1	SilentIntronRegion	0	6.07	0.70	1.64	0.00	3.19	6.14	0.87	0.20	4.34	2.36	1.95	2.49	0.77	0.89	2.70	7.07	2.44	3.39	0.00	1.20	6.53	0.00	0.59	1.41	1.25	0.17	2.20	4.44	0.66
23	I4_AR1	ActiveIntronRegion	0	5.76	1.28	3.33	1.78	5.10	4.10	1.20	1.47	4.27	3.88	2.07	4.66	2.74	1.46	2.20	2.28	3.19	4.03	3.50	2.35	7.45	0.27	0.36	1.61	0.78	1.33	3.37	6.49	1.80
24	E5_Aa	NovelBoundary	0	2.54	0.00	0.00	0.00	0.00	0.00	0.00	2.54	4.87	5.43	0.00	5.75	1.97	1.37	0.00	0.00	5.60	4.62	8.09	0.00	3.73	0.00	0.00	0.00	3.11	0.00	0.00	6.74	4.52
25	ER5a	ExonRegion	0	300.71	244.70	631.88	397.25	254.98	389.31	388.36	482.82	294.15	349.02	333.96	482.27	598.05	157.23	221.61	205.77	315.54	304.07	316.25	287.55	612.56	393.66	233.52	281.93	425.33	629.69	384.48	347.25	281.73
26	E5_Da	NovelBoundary	1	6.02	0.00	1.40	0.00	0.00	1.53	0.00	2.09	4.32	0.00	0.00	6.87	4.08	1.33	0.00	7.42	8.91	9.25	0.00	0.00	13.12	0.00	0.00	0.00	0.00	2.02	0.00	16.98	1.35
27	E5a_E6a	KnownJunction	0	328.96	229.19	543.12	345.32	243.46	391.39	324.01	443.12	299.01	270.79	308.97	475.89	524.25	139.74	247.55	212.05	281.30	249.67	258.51	297.72	588.50	378.68	187.84	283.29	355.48	537.41	480.53	302.66	215.08
28	I5	Intron	0	3.12	2.17	2.27	2.78	2.84	2.93	2.93	2.14	3.23	2.73	3.58	2.48	1.19	2.26	4.50	2.94	8.25	5.62	5.73	2.89	5.26	0.52	0.00	1.67	2.98	1.60	0.00	5.77	1.59
29	I5_SR1	SilentIntronRegion	0	3.12	2.17	2.27	2.79	2.85	2.94	2.94	2.15	3.24	2.73	3.58	2.48	1.20	2.26	4.51	2.95	8.27	5.63	5.74	2.89	5.27	0.53	0.00	1.67	2.99	1.60	0.00	5.78	1.59
30	E6_Aa	NovelBoundary	0	5.66	7.95	7.62	0.00	0.00	1.53	0.00	1.89	2.44	0.00	1.61	1.30	0.00	0.00	0.00	0.00	6.37	0.00	8.09	8.10	13.64	2.48	0.00	3.05	0.00	0.00	0.00	5.66	0.00
31	ER6a	ExonRegion	0	272.44	260.60	477.47	332.25	207.85	365.72	367.51	341.61	187.25	251.40	284.38	455.77	518.57	124.13	161.04	195.64	292.92	283.20	310.64	299.40	557.90	354.12	218.25	220.04	284.25	463.47	297.21	254.81	220.93
32	E6_Da	NovelBoundary	0	3.01	0.00	1.07	0.00	0.00	3.61	0.00	0.00	1.55	3.56	1.61	0.00	0.00	0.00	0.00	3.82	0.86	10.02	0.00	0.00	4.05	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00
33	E6a_E7a	KnownJunction	0	366.18	379.27	528.74	494.37	345.59	451.32	377.27	360.26	225.20	370.77	491.47	491.95	559.92	133.29	204.30	240.97	382.61	309.26	477.46	416.56	647.26	408.34	239.25	302.43	429.88	674.10	449.22	370.46	300.79
34	I6	Intron	0	1.51	1.33	1.28	0.00	8.44	1.50	1.29	1.88	2.47	1.66	1.07	0.79	0.66	0.46	0.70	3.81	3.15	0.62	2.25	1.14	1.83	0.23	0.23	2.20	0.82	2.21	0.35	1.56	0.60
35	I6_SR1	SilentIntronRegion	0	1.51	1.33	1.29	0.00	8.46	1.50	1.29	1.89	2.48	1.67	1.07	0.79	0.67	0.47	0.70	3.82	3.16	0.62	2.24	1.14	1.83	0.23	0.23	2.21	0.83	2.22	0.35	1.57	0.60
36	E7_Aa	NovelBoundary	0	5.96	4.56	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	2.97	0.00	0.00	0.00	0.00	6.66	1.78	4.62	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00
37	ER7a	ExonRegion	0	314.79	311.65	740.39	387.31	280.33	463.40	426.97	416.73	272.18	386.18	505.48	575.38	667.87	132.95	251.67	205.20	433.69	305.74	389.73	365.01	684.00	370.96	312.24	295.04	412.42	755.99	551.47	496.32	370.10
38	E7_Da	NovelBoundary	0	8.02	13.96	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	3.80	0.00	1.13	0.00	0.00	1.35	0.00	8.09	0.00	9.15	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00
39	E7a_E8a	KnownJunction	0	258.59	266.81	631.29	222.81	159.90	384.48	445.99	290.68	365.64	244.31	431.59	618.75	683.63	109.90	309.74	177.71	485.91	351.26	388.21	342.13	692.51	327.83	259.50	227.72	290.24	699.29	513.28	466.03	400.49
40	E7a_E9a	NovelJunction	0	2.89	0.00	4.58	20.92	0.00	0.00	0.00	4.68	2.80	1.76	0.00	2.92	6.05	2.15	0.00	0.00	0.00	0.00	0.00	0.00	11.87	0.00	4.43	5.86	0.00	0.00	2.24	0.00	0.00
41	I7	Intron	0	1.90	1.56	1.89	2.61	1.77	2.11	1.47	0.82	1.27	1.75	0.96	2.34	0.55	0.84	1.00	2.55	4.52	3.82	1.81	1.69	3.80	0.00	0.58	2.87	1.27	0.70	0.22	2.04	0.65
42	I7_SR1	SilentIntronRegion	0	2.20	0.60	3.03	1.68	1.82	2.05	1.61	1.37	1.20	2.02	1.44	2.23	0.37	0.85	0.81	2.88	5.70	3.84	1.78	1.32	4.84	0.00	0.67	2.61	1.60	0.87	0.51	3.25	1.00
43	I7_AR1	ActiveIntronRegion	0	1.03	2.79	1.06	4.48	0.94	2.26	1.64	0.18	1.35	1.81	0.80	3.04	0.93	0.96	1.11	2.63	4.03	4.61	1.55	1.86	3.11	0.00	0.52	3.11	0.41	0.46	0.00	1.04	0.26
44	I7_SR2	SilentIntronRegion	0	3.55	0.89	0.92	0.00	4.04	1.89	0.56	1.02	1.24	0.80	0.00	0.68	0.00	0.50	1.27	1.37	2.47	1.59	2.64	2.28	2.75	0.00	0.50	2.97	2.76	0.87	0.00	1.35	0.74
45	E8_Aa	NovelBoundary	0	5.49	4.85	0.00	0.00	0.00	0.00	10.76	2.54	1.25	0.00	0.00	3.46	1.97	0.91	0.00	0.00	6.42	0.00	0.00	4.13	5.66	1.94	0.00	2.99	6.90	1.72	0.00	1.80	0.00
46	ER8a	ExonRegion	0	381.69	392.32	522.80	297.26	242.20	401.39	450.20	404.72	392.41	323.30	475.91	605.39	663.43	135.75	260.99	192.28	392.82	328.73	373.52	417.13	676.22	442.63	265.02	306.15	456.24	728.87	602.65	412.77	426.39
47	E8a_E9a	KnownJunction	0	338.22	444.32	342.11	235.75	217.23	355.17	367.61	385.83	370.30	308.14	391.32	446.98	584.57	112.91	265.29	182.91	283.35	394.28	323.70	387.45	628.45	333.81	252.40	296.68	418.48	694.39	629.92	381.11	332.31
48	E9_Aa	NovelBoundary	0	3.01	3.88	0.00	0.00	0.00	0.00	0.00	0.00	5.18	0.00	0.00	1.57	0.00	3.41	8.77	0.00	5.74	0.00	0.00	0.00	1.56	0.00	0.00	2.81	0.00	0.00	0.00	2.11	0.00
49	ER9a	ExonRegion	0	177.11	336.98	248.88	302.53	298.85	363.80	312.23	176.88	487.23	245.55	344.09	279.42	428.41	75.74	403.11	246.07	161.98	220.97	357.19	319.24	636.33	183.18	169.65	243.38	250.89	214.15	397.30	182.25	233.36
50	IG7_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	1.63	0.00