Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	UNC50	Gene	0	124.90	130.74	53.12	185.12	255.34	150.17	206.78	141.93	100.94	98.69	90.99	67.44	70.06	93.92	162.51	164.96	108.04	92.98	155.19	159.66	154.62	91.81	50.46	136.38	95.94	44.78	109.62	53.57	67.61
2	357765	Transcript	0	79.28	44.89	55.49	185.93	93.73	60.85	111.57	173.58	55.12	21.65	17.56	46.72	43.72	41.72	9.97	34.96	47.22	19.26	64.74	98.41	82.11	93.69	11.43	49.59	29.89	48.24	6.86	16.00	61.74
3	409975	Transcript	0	9.55	3.97	4.36	6.17	3.79	10.76	8.04	6.13	1.57	8.99	1.37	3.36	0.32	9.11	8.80	19.81	17.19	11.51	3.28	3.10	5.16	1.97	0.98	4.35	3.70	0.94	0.68	3.71	1.98
4	409347	Transcript	0	0.00	0.00	0.00	0.00	0.00	4.95	2.92	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	393493	Transcript	0	16.58	16.75	3.60	23.56	15.47	14.57	19.06	4.04	9.31	6.09	17.06	10.96	6.27	10.15	23.30	16.49	10.99	14.30	26.18	26.75	11.60	6.62	3.58	21.86	10.50	1.02	7.29	3.50	6.08
6	423713	Transcript	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	2.44	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	466492	Transcript	0	24.29	22.54	4.24	10.36	20.89	20.43	24.52	10.07	12.70	18.41	11.90	11.13	7.61	18.14	23.34	40.28	20.03	26.00	24.14	16.47	29.24	7.91	4.32	25.40	16.20	4.15	13.58	6.61	8.95
8	ER1a	ExonRegion	0	100.66	57.24	80.49	453.98	464.76	51.65	135.00	105.29	25.17	39.11	21.86	35.28	51.48	41.84	88.85	159.81	44.28	103.10	71.10	112.67	70.64	93.72	68.20	38.14	29.43	84.59	26.76	81.61	57.02
9	E1_Da	KnownBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	2.23	0.00	0.00	0.00	0.00	1.51	0.00	1.37	0.00	0.00	3.78	4.62	8.09	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	3.95	3.24
10	E1a_E1c	NovelJunction	0	0.00	0.00	5.36	0.00	6.04	15.50	7.78	6.27	0.00	12.66	0.00	2.77	12.93	0.00	9.37	20.58	3.76	4.62	0.00	0.00	3.53	2.48	2.07	2.57	0.00	10.39	12.82	6.87	19.08
11	E1a_E1d	KnownJunction	0	79.28	44.89	55.49	185.93	93.73	60.85	111.57	173.58	55.12	21.65	17.56	46.72	43.72	41.72	9.97	34.96	47.22	19.26	64.74	98.41	82.11	93.69	11.43	49.59	29.89	48.24	6.86	16.00	61.74
12	ER1b	ExonRegion	0	8.36	2.95	1.08	0.00	3.25	7.22	7.38	3.15	1.11	4.58	0.23	1.34	0.01	5.22	8.50	17.41	8.83	8.81	2.07	4.07	3.66	2.34	0.78	1.73	3.04	0.79	0.00	3.16	1.96
13	E1_Ab	KnownBoundary	0	4.54	0.00	1.52	0.00	7.37	21.45	7.95	0.00	4.39	5.63	1.61	3.04	0.00	6.98	16.14	60.36	9.39	23.12	8.09	7.19	1.60	0.00	0.00	0.00	0.00	1.63	0.00	4.58	4.95
14	ER1c	ExonRegion	0	6.33	6.51	5.91	12.44	18.64	13.30	10.08	4.98	1.29	11.77	2.33	4.74	0.40	7.55	10.36	21.97	18.62	10.56	3.47	4.09	4.45	1.65	1.10	7.11	3.63	1.07	2.24	4.49	5.23
15	E1_Db	KnownBoundary	0	5.54	8.34	8.02	20.71	0.00	19.80	10.99	9.31	4.42	14.78	0.00	1.54	0.00	6.29	9.97	58.14	12.38	13.87	8.09	4.13	5.82	0.00	0.00	11.42	1.48	2.19	0.00	12.67	0.00
16	E1b_E1c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.95	2.92	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1b_E1d	NovelJunction	0	0.00	8.92	0.00	0.00	0.00	1.73	2.46	5.08	0.00	0.00	0.00	0.00	0.00	0.00	9.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER1d	ExonRegion	0	10.73	4.98	7.64	12.33	4.32	14.29	8.71	9.11	2.03	13.40	2.50	5.37	0.64	13.00	9.11	22.20	25.56	14.22	4.50	2.13	6.66	1.60	1.18	6.98	4.36	1.09	1.35	4.25	2.01
19	E1_Ac	KnownBoundary	0	11.86	12.12	5.58	0.00	0.00	11.05	2.69	11.94	5.06	27.16	4.14	5.48	0.00	11.54	7.57	10.71	25.82	19.39	8.09	0.00	9.83	1.90	0.00	11.48	7.08	0.00	0.00	4.00	0.00
20	ER1e	ExonRegion	0	27.69	21.13	9.09	17.08	11.15	55.12	51.57	47.04	8.83	51.62	7.46	9.48	12.17	36.79	44.26	81.63	55.56	51.03	16.18	16.71	23.74	63.78	10.51	32.55	14.05	7.91	6.09	16.00	28.92
21	E1_Ad	KnownBoundary	0	16.69	25.69	14.03	38.61	7.22	84.64	129.53	93.41	25.06	104.50	13.92	16.32	27.70	55.10	128.16	97.99	85.90	88.62	24.28	33.25	31.33	60.72	20.93	48.75	30.27	19.40	18.98	25.52	46.55
22	ER1f	ExonRegion	0	317.25	188.96	154.79	267.08	472.12	176.63	339.15	422.70	107.16	197.66	146.67	125.50	150.64	214.67	238.53	279.18	198.15	191.44	232.67	321.76	196.19	267.05	119.24	226.29	213.62	146.47	185.99	148.64	177.73
23	E1_Dc	NovelBoundary	0	17.05	0.00	12.51	0.00	0.00	17.42	2.35	4.98	6.94	8.51	11.74	1.30	0.00	20.30	19.73	30.98	26.45	18.37	0.00	10.25	14.08	2.14	1.82	16.21	7.16	0.00	0.00	4.18	1.68
24	E1c_E2a	KnownJunction	0	337.22	248.39	303.94	638.66	929.91	233.74	449.19	440.43	195.08	218.94	159.85	144.55	189.03	269.34	331.67	302.78	268.04	224.37	242.32	449.64	232.72	244.25	122.14	284.60	295.09	55.45	237.01	150.57	153.48
25	I1	Intron	0	14.58	11.44	5.41	10.45	3.16	16.80	11.75	3.14	4.27	14.61	5.01	5.55	0.37	21.02	7.52	40.32	32.63	21.63	16.55	4.76	13.16	1.46	1.17	9.06	4.05	3.56	0.59	4.88	1.57
26	I1_AR1	ActiveIntronRegion	0	15.04	8.13	2.49	4.76	1.98	15.07	7.82	1.13	6.34	19.96	2.81	2.93	0.00	24.43	0.40	40.87	28.05	21.23	14.80	0.80	10.83	1.45	0.00	5.79	3.87	4.30	0.00	2.74	2.44
27	I1_SR1	SilentIntronRegion	0	17.63	14.48	8.87	5.98	0.00	13.25	16.40	4.60	4.75	14.63	6.33	2.75	0.00	20.74	12.73	55.68	25.32	8.81	22.42	5.24	8.17	0.00	0.00	6.45	4.87	3.00	0.00	6.67	0.49
28	I1_AR2	ActiveIntronRegion	0	14.71	12.50	6.19	12.47	3.72	17.90	12.91	3.69	3.81	13.58	5.68	6.54	0.49	20.70	9.40	40.57	35.11	22.93	17.21	5.93	14.39	1.57	1.57	10.31	4.17	3.49	0.80	5.51	1.43
29	E2_Aa	NovelBoundary	0	11.86	16.48	2.54	17.69	5.89	9.05	11.04	9.06	2.83	9.47	2.66	4.46	1.91	18.43	15.95	32.89	31.99	27.74	8.09	8.27	5.13	0.00	2.51	13.28	5.38	1.89	0.00	5.75	2.91
30	ER2a	ExonRegion	0	422.26	337.23	150.87	739.55	912.03	361.28	551.68	495.94	239.73	261.53	250.77	173.79	219.03	263.70	376.58	384.23	248.40	222.55	433.43	426.64	355.29	262.13	149.83	380.31	370.41	114.69	303.01	121.24	206.04
31	E2_Da	NovelBoundary	0	18.34	29.09	1.49	9.71	0.00	13.01	2.52	2.54	4.96	7.99	9.65	5.72	1.24	20.16	0.00	42.15	32.23	13.87	0.00	14.80	19.53	0.00	0.00	2.87	5.72	1.93	0.00	0.00	1.55
32	E2a_E3b	KnownJunction	0	295.52	260.80	89.30	864.49	772.82	282.00	416.18	359.51	170.11	216.07	243.08	181.56	142.63	249.55	363.96	366.28	226.15	250.05	461.27	511.91	306.40	227.38	98.30	468.95	346.99	64.80	223.74	87.53	136.97
33	E2a_E4b	NovelJunction	0	2.83	3.97	0.00	0.00	0.00	3.45	4.92	16.07	4.72	6.39	5.31	1.57	3.76	3.72	0.00	7.19	14.97	0.00	16.18	15.63	3.77	11.67	0.00	0.00	1.70	0.00	0.00	4.09	7.20
34	I2	Intron	0	15.79	14.40	6.05	8.90	7.17	21.87	3.42	2.74	5.97	12.13	5.00	6.68	2.57	12.19	9.17	35.51	39.13	25.99	16.46	6.73	9.65	1.12	1.50	8.28	7.57	4.16	1.21	7.12	3.32
35	I2_SR1	SilentIntronRegion	0	9.58	12.22	2.92	3.51	4.78	17.96	3.10	1.16	1.64	8.58	4.07	3.01	0.59	8.25	3.02	26.61	18.88	19.72	13.61	3.58	7.27	0.38	0.76	2.40	2.99	1.10	0.38	3.19	0.61
36	I2_SR2	SilentIntronRegion	0	17.07	28.38	8.24	19.03	12.04	34.66	8.03	5.58	14.23	18.89	7.67	10.63	10.18	16.21	12.74	30.46	34.24	31.17	22.41	14.86	19.20	3.42	2.74	7.75	11.65	5.36	5.21	4.64	6.84
37	I2_AR2	ActiveIntronRegion	0	19.40	13.09	7.82	10.28	7.34	20.80	2.91	3.25	6.76	12.99	5.23	7.94	2.44	13.18	11.33	40.88	52.14	29.02	17.15	6.80	8.69	1.06	1.65	11.10	9.72	6.14	1.01	10.32	4.40
38	I2_SR3	SilentIntronRegion	0	17.01	15.52	3.27	7.19	11.45	35.83	1.80	1.51	7.33	13.41	3.94	8.73	0.00	20.32	17.98	54.61	45.86	28.79	14.71	9.20	16.28	1.48	2.03	17.21	5.67	0.28	0.00	4.46	1.45
39	I2_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E3_Aa	NovelBoundary	0	2.89	0.00	5.06	21.14	13.56	9.02	0.00	0.00	23.60	1.92	4.27	0.00	0.00	7.84	0.00	15.99	20.30	0.00	0.00	0.00	13.84	0.00	0.00	5.32	6.82	0.00	0.00	0.00	0.00
41	E3_Ab	NovelBoundary	0	2.95	12.31	0.00	10.57	0.00	7.02	2.63	2.39	0.00	3.52	0.00	4.16	5.60	9.44	26.51	13.92	18.86	0.00	0.00	0.00	4.09	0.00	0.00	5.74	1.89	0.00	1.89	2.25	0.00
42	ER3a	ExonRegion	0	162.90	142.89	43.76	383.91	363.65	142.97	216.69	187.79	84.83	106.84	135.67	90.91	75.99	126.53	173.62	165.76	110.69	106.44	239.87	271.23	170.45	116.28	56.06	234.48	175.81	36.15	129.12	52.16	64.42
43	ER3b	ExonRegion	0	321.49	347.11	138.11	396.15	677.35	475.92	632.21	293.73	259.26	323.52	377.24	231.00	208.45	254.54	421.98	420.50	326.15	234.18	445.42	456.66	474.31	186.43	146.92	436.14	337.72	102.55	445.62	160.26	188.81
44	E3_Da	NovelBoundary	0	13.80	21.72	1.02	21.14	6.34	36.91	7.95	2.09	25.06	12.78	10.28	4.37	2.74	23.15	0.00	73.90	51.68	32.24	8.09	0.00	18.81	2.33	0.00	37.09	10.99	2.10	0.00	0.00	5.35
45	E3a_E4b	KnownJunction	0	278.41	524.79	130.73	374.23	783.28	577.24	831.16	283.96	333.70	356.99	334.16	223.34	214.54	242.44	664.53	451.80	274.05	252.62	646.50	563.26	647.94	231.42	156.42	564.18	442.76	161.14	463.88	181.57	214.22
46	E3a_E5b	KnownJunction	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	2.44	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	I3	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.31	3.64	0.00	9.83	6.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.50	3.80	0.00	10.23	6.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E4_Aa	NovelBoundary	0	11.38	35.29	1.37	10.57	20.48	25.09	11.10	9.31	11.02	13.98	6.45	7.23	6.62	24.75	77.73	64.03	63.23	42.38	16.18	18.52	15.40	0.00	0.00	25.06	15.15	1.72	20.28	4.58	3.73
50	ER4a	ExonRegion	0	24.29	22.54	4.24	10.36	20.89	20.43	24.52	10.07	12.70	18.41	11.90	11.13	7.61	18.14	23.34	40.28	20.03	26.00	24.14	16.47	29.24	7.91	4.32	25.40	16.20	4.15	13.58	6.61	8.95
51	E4_Ab	KnownBoundary	0	35.51	25.40	0.95	0.00	6.34	13.39	5.32	5.08	12.24	20.41	4.11	11.87	3.41	24.59	26.91	66.32	46.57	38.02	16.18	0.00	24.51	4.18	0.00	35.47	13.87	0.00	3.78	10.42	7.43
52	ER4b	ExonRegion	0	232.22	418.35	66.64	331.89	505.60	442.17	576.42	228.22	207.06	278.86	348.78	202.69	180.68	213.31	432.52	434.68	252.39	230.41	493.81	439.08	457.90	157.52	100.65	398.54	244.43	73.59	421.09	92.40	117.47
53	E4_Da	NovelBoundary	0	18.46	18.42	2.77	18.55	32.72	27.01	2.35	4.33	11.94	16.22	7.94	8.67	0.00	23.38	23.92	62.65	43.15	42.38	0.00	11.58	25.07	0.00	0.00	22.49	12.77	4.29	0.00	9.88	9.28
54	E4a_E5a	KnownJunction	0	8.55	4.65	1.54	9.92	5.60	4.57	8.75	0.00	0.00	0.00	12.91	4.07	3.95	3.81	8.37	3.60	2.39	4.62	8.09	16.95	5.46	1.94	2.36	12.20	5.46	0.00	0.00	1.75	3.47
55	E4a_E5b	KnownJunction	0	145.34	325.46	47.59	521.54	452.14	288.60	323.72	105.85	232.05	168.69	230.14	132.35	140.08	167.61	488.33	323.82	234.70	156.43	493.42	317.23	292.97	84.84	60.33	257.86	146.50	38.32	361.50	66.68	68.87
56	I4	Intron	0	20.66	17.59	6.16	17.85	15.69	27.20	9.61	7.85	23.54	19.03	9.62	12.54	4.42	26.00	41.19	71.51	57.93	26.71	19.14	11.01	18.12	2.02	2.09	40.07	14.70	5.45	1.78	8.83	8.45
57	I4_AR1	ActiveIntronRegion	0	20.30	16.29	5.56	17.36	18.42	25.68	9.61	7.60	19.81	18.85	9.39	12.65	3.87	25.46	36.70	73.96	56.20	28.62	15.96	12.39	18.13	1.80	2.12	36.93	14.02	5.55	1.27	9.11	8.46
58	I4_AR2	ActiveIntronRegion	0	21.53	20.44	7.44	18.98	9.97	30.53	9.65	8.41	31.53	19.50	10.17	12.35	5.60	27.23	50.85	66.60	61.87	22.78	25.94	8.14	18.19	2.48	2.04	46.86	16.22	5.24	2.89	8.28	8.48
59	E5_Aa	NovelBoundary	0	3.01	14.45	1.27	0.00	0.00	5.64	0.00	2.39	8.98	3.87	7.75	4.13	1.69	7.98	34.48	33.51	11.16	13.87	16.18	0.00	4.09	2.33	0.00	14.06	1.89	1.93	2.34	6.60	1.98
60	E5_Ab	NovelBoundary	0	31.09	33.16	8.10	19.20	6.63	18.49	10.99	4.63	32.01	9.07	0.00	16.05	0.00	16.48	44.25	38.63	20.46	27.74	32.37	31.67	8.78	9.09	1.72	32.72	9.21	0.00	0.00	6.65	10.10
61	ER5a	ExonRegion	0	24.60	28.85	5.66	37.20	25.34	24.56	29.36	8.08	18.61	12.18	21.21	17.85	8.58	16.48	38.23	29.38	19.60	23.97	44.27	36.54	17.74	11.29	4.80	31.52	15.54	2.05	14.57	5.24	8.69
62	ER5b	ExonRegion	1	118.83	260.32	32.59	227.18	296.03	298.79	338.44	128.53	294.63	103.49	105.01	86.14	86.52	110.87	343.61	246.79	143.67	104.34	283.51	239.64	330.73	93.63	50.50	220.79	75.80	23.86	127.08	37.62	65.99
63	ER5c	ExonRegion	0	2.86	2.19	2.62	4.88	16.61	8.71	4.70	1.23	14.23	0.96	1.19	0.00	7.36	1.51	22.40	5.91	3.34	2.73	24.14	16.86	8.08	1.80	1.81	0.00	0.00	0.00	0.00	4.89	0.00
64	IG22_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00