Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM136A	Gene	0	150.97	150.41	107.41	284.83	658.86	162.89	195.95	174.07	199.79	170.11	150.26	153.78	228.24	98.05	149.70	174.73	114.17	97.70	114.52	89.70	121.00	102.10	158.17	135.20	166.87	114.13	179.49	183.13	90.64
2	37869	Transcript	0	6.00	3.71	8.32	23.30	86.39	4.89	5.96	4.97	3.76	5.86	3.49	3.04	16.05	3.71	5.28	5.86	3.22	10.25	0.00	0.44	2.28	3.89	10.64	3.13	1.65	11.74	8.35	11.85	7.71
3	450256	Transcript	0	0.00	0.00	1.15	0.00	0.00	1.96	0.00	1.94	0.00	0.00	3.23	0.00	1.40	1.84	0.00	0.00	0.00	5.39	8.09	0.00	0.00	2.24	0.00	0.00	3.60	0.00	0.00	5.62	0.00
4	460307	Transcript	0	45.27	11.44	10.31	35.32	29.74	24.62	37.35	31.13	42.44	19.94	9.68	11.17	1.90	17.91	28.20	61.67	48.81	22.57	9.55	11.64	8.06	5.01	2.65	19.88	47.87	8.87	0.54	16.78	5.10
5	430566	Transcript	0	0.13	0.07	2.35	2.94	3.14	0.00	2.15	1.34	0.23	1.12	0.46	0.76	1.55	0.43	0.00	0.00	0.47	1.63	0.00	0.00	1.63	2.53	0.01	0.00	0.03	0.61	1.55	0.02	0.02
6	498665	Transcript	0	2.02	1.71	1.78	9.91	15.66	3.71	0.93	3.53	3.10	1.78	1.81	1.99	0.50	4.15	4.39	4.86	6.80	4.78	3.94	1.27	1.10	0.13	0.29	1.26	1.77	1.45	0.28	3.39	0.31
7	438759	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	1.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45
8	ER1a	ExonRegion	0	12.00	7.41	13.27	39.28	162.83	7.03	9.91	8.10	5.26	10.27	5.78	6.08	25.61	7.41	10.56	11.71	5.44	17.78	0.00	0.88	4.56	7.78	17.67	6.27	3.31	14.05	5.70	18.82	11.39
9	E1_Ab	KnownBoundary	0	6.02	8.43	5.43	9.27	80.02	7.60	8.35	0.00	4.54	2.04	1.61	4.61	11.30	6.49	7.77	0.00	4.12	15.41	0.00	0.00	0.00	6.81	2.51	5.92	1.93	10.86	2.53	11.46	5.22
10	E1_Ac	KnownBoundary	0	32.09	21.23	34.01	159.83	501.80	17.42	28.44	20.30	13.19	30.00	18.44	13.55	50.95	12.70	17.74	41.84	13.87	18.49	0.00	4.13	14.32	11.81	46.34	11.66	14.74	51.93	19.38	37.61	32.75
11	ER1b	ExonRegion	0	38.19	26.88	53.66	146.25	590.09	18.87	35.73	26.44	19.61	32.16	17.20	26.42	73.10	16.66	31.06	37.50	23.77	59.55	1.65	13.03	13.87	31.63	70.52	15.45	14.42	43.43	18.48	60.76	40.75
12	ER1c	ExonRegion	1	80.48	36.93	125.67	358.32	1084.01	42.28	63.47	76.88	53.66	60.59	31.09	94.75	161.51	30.54	71.11	118.48	67.02	95.36	7.54	41.39	44.56	88.83	145.54	23.99	38.07	101.20	48.84	131.93	101.07
13	E1_Ad	KnownBoundary	1	102.69	39.56	135.51	309.95	1241.75	40.98	56.36	80.37	73.66	55.20	34.86	98.43	141.61	30.89	78.93	134.41	82.32	23.25	0.00	41.27	54.71	106.86	143.86	17.77	53.83	96.47	41.89	127.79	107.86
14	E1_Ae	KnownBoundary	1	173.24	67.09	208.46	1277.76	1681.21	100.48	236.75	229.47	68.82	100.98	64.50	170.27	286.69	70.06	327.08	278.23	80.65	157.84	96.88	94.44	81.02	121.69	276.83	67.53	97.14	344.99	167.33	441.45	129.21
15	ER1d	ExonRegion	1	123.37	60.04	219.55	1017.68	1364.94	66.52	133.71	150.56	74.96	64.65	38.61	210.20	314.43	55.78	236.47	254.06	139.80	138.73	61.60	66.99	56.03	124.09	232.46	42.07	53.76	174.01	77.74	240.25	161.21
16	ER1e	ExonRegion	0	90.86	65.56	165.71	593.17	637.85	46.86	129.45	133.06	43.96	44.82	32.46	134.87	200.61	55.16	133.12	114.91	115.11	53.55	78.05	39.43	33.82	64.25	110.38	42.03	65.36	103.09	50.91	127.71	98.97
17	E1_Da	KnownBoundary	0	5.66	0.00	3.84	0.00	7.37	0.00	0.00	0.00	1.43	0.00	2.85	0.00	0.00	0.00	0.00	0.00	3.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.57	0.00	0.00
18	E1a_E1f	KnownJunction	0	25.54	0.00	9.47	30.84	7.37	5.26	7.90	11.84	3.81	9.39	9.55	10.33	1.59	7.07	0.00	0.00	16.34	0.00	0.00	7.69	9.47	0.00	5.96	2.57	21.14	7.04	0.00	8.31	5.98
19	E1a_E1g	KnownJunction	0	81.64	104.32	89.27	215.05	310.36	49.23	94.12	176.27	33.07	84.72	44.60	39.64	95.31	55.41	60.19	25.55	43.51	18.49	56.65	35.31	69.31	98.98	81.90	50.25	99.37	113.29	71.96	94.63	35.26
20	ER1f	ExonRegion	0	3.78	0.70	4.07	1.43	5.49	0.91	2.91	1.68	0.95	0.87	0.88	0.87	0.80	0.92	0.97	1.44	4.27	2.34	1.06	1.51	0.97	1.92	1.48	0.46	1.17	2.20	1.86	0.34	0.34
21	E1_Db	KnownBoundary	0	0.00	0.00	4.34	0.00	0.00	0.00	0.00	1.99	1.55	1.96	0.00	5.63	0.00	3.06	0.00	0.00	1.17	0.00	0.00	0.00	2.05	7.05	0.00	0.00	0.00	0.00	14.46	0.00	0.00
22	E1b_E1g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	1.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45
23	ER1g	ExonRegion	0	0.26	0.15	3.28	5.87	0.68	0.00	1.89	2.68	0.46	2.23	0.92	1.52	1.48	0.87	0.00	0.00	0.94	3.27	0.00	0.00	1.49	2.87	0.03	0.00	0.06	1.21	3.11	0.05	0.04
24	E1c_E1f	NovelJunction	0	0.00	0.00	1.52	0.00	0.00	3.49	2.40	4.38	0.00	2.00	0.00	0.00	1.46	1.04	0.00	3.82	3.42	0.00	0.00	0.00	0.00	0.00	1.82	0.00	7.08	0.00	0.00	0.00	0.00
25	E1c_E1g	KnownJunction	0	0.00	0.00	1.42	0.00	5.60	0.00	2.40	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.76	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER1h	ExonRegion	0	30.39	4.19	7.32	29.06	46.99	30.64	53.78	21.71	45.75	16.54	5.93	10.22	1.92	12.39	16.06	41.10	40.05	14.31	8.29	10.04	7.21	3.03	3.63	10.00	33.44	17.49	3.81	20.42	6.75
27	E1_Dd	KnownBoundary	0	19.23	0.00	11.21	30.41	12.08	12.28	16.13	14.53	13.49	12.58	3.80	15.57	1.62	21.71	0.00	22.49	41.06	9.76	0.00	3.14	0.00	9.19	4.73	10.47	12.81	12.23	0.00	22.87	6.80
28	E1d_E1g	KnownJunction	0	0.00	0.00	1.15	0.00	0.00	1.96	0.00	1.94	0.00	0.00	3.23	0.00	1.40	1.84	0.00	0.00	0.00	5.39	8.09	0.00	0.00	2.24	0.00	0.00	3.60	0.00	0.00	5.62	0.00
29	ER1i	ExonRegion	0	45.27	11.44	10.31	35.32	29.74	24.62	37.35	31.13	42.44	19.94	9.68	11.17	1.90	17.91	28.20	61.67	48.81	22.57	9.55	11.64	8.06	5.01	2.65	19.88	47.87	8.87	0.54	16.78	5.10
30	E1_Ag	KnownBoundary	0	28.96	3.49	8.17	60.61	58.36	5.03	22.43	19.81	37.64	10.67	0.00	3.92	0.00	21.03	43.25	45.82	35.05	19.26	8.09	16.37	3.85	2.04	6.94	39.00	40.80	1.63	0.00	8.54	6.57
31	ER1j	ExonRegion	0	220.81	128.58	49.97	129.54	201.36	115.30	170.85	335.08	134.99	134.68	89.47	143.90	265.56	130.54	202.30	214.48	122.48	125.09	79.43	124.63	89.49	174.09	181.73	114.83	185.37	143.57	60.11	145.83	114.05
32	E1_De	KnownBoundary	0	2.18	4.85	2.52	0.00	0.00	3.38	0.00	2.19	4.42	1.88	4.33	1.54	1.72	2.13	0.00	0.00	7.88	0.00	0.00	0.00	0.00	2.48	0.00	2.57	0.00	0.00	0.00	8.63	0.00
33	E1e_E2a	KnownJunction	0	188.93	221.14	68.44	155.51	291.80	113.84	342.20	262.37	231.23	211.63	100.16	289.90	467.41	142.73	349.41	308.90	190.88	166.06	72.83	118.09	90.33	169.58	316.38	135.00	170.22	215.99	92.59	264.42	217.23
34	ER1k	ExonRegion	0	2.02	1.71	1.78	9.91	15.66	3.71	0.93	3.53	3.10	1.78	1.81	1.99	0.50	4.15	4.39	4.86	6.80	4.78	3.94	1.27	1.10	0.13	0.29	1.26	1.77	1.45	0.28	3.39	0.31
35	E1_Df	NovelBoundary	0	1534.98	1362.64	1305.91	808.63	1084.80	1216.44	763.76	881.55	1665.30	1518.45	745.75	843.24	871.36	970.46	1184.36	989.28	1750.57	309.00	573.89	774.73	1668.15	977.99	963.42	1480.91	1257.33	1041.01	790.74	917.59	693.98
36	I1	Intron	0	4.30	2.33	1.50	5.29	8.76	6.89	2.02	2.43	4.78	4.34	1.88	2.28	1.30	4.13	4.41	7.80	5.43	2.84	1.18	2.33	2.71	1.62	0.95	1.47	2.64	2.07	0.48	1.63	1.13
37	I1_SR1	SilentIntronRegion	0	4.30	2.33	1.50	5.30	8.77	6.89	2.02	2.43	4.79	4.34	1.88	2.28	1.30	4.13	4.42	7.81	5.44	2.85	1.18	2.33	2.71	1.62	0.95	1.48	2.64	2.08	0.48	1.64	1.13
38	E2_Aa	NovelBoundary	0	3.01	0.00	1.54	10.78	18.86	5.22	4.81	4.63	8.71	0.00	3.64	5.15	0.00	2.75	0.00	6.04	4.79	0.00	0.00	2.98	1.89	0.00	0.00	5.26	1.52	0.00	0.00	1.89	6.27
39	ER2a	ExonRegion	0	295.35	181.30	94.43	175.08	389.42	126.10	287.98	374.98	184.82	198.49	126.70	242.45	379.39	138.78	273.46	241.05	166.52	127.85	157.97	158.75	113.45	189.11	299.75	144.13	253.60	253.85	170.37	312.94	190.25
40	E2_Da	KnownBoundary	0	335.86	247.90	135.66	273.50	682.33	148.29	226.86	363.64	182.93	219.74	175.10	188.94	286.47	155.54	229.22	196.68	169.83	65.63	113.07	167.63	124.22	206.48	234.38	200.50	281.49	211.18	217.58	328.90	150.57
41	ER2b	ExonRegion	0	304.69	246.87	288.35	671.45	1524.21	285.26	318.58	334.02	251.62	296.53	298.49	243.87	326.05	175.43	224.20	308.07	169.86	164.62	180.94	179.19	194.70	194.99	292.15	218.32	289.67	169.94	275.49	247.56	149.42
42	E2_Db	KnownBoundary	0	344.77	172.47	232.53	437.42	1074.49	376.08	400.16	411.22	375.05	245.39	343.11	305.27	476.07	215.87	236.59	309.13	226.42	193.16	113.29	109.08	244.79	198.89	310.22	227.06	329.68	260.27	316.42	321.44	206.60
43	ER2c	ExonRegion	0	364.72	259.41	205.08	456.18	1038.85	410.29	433.48	442.51	354.23	410.38	358.11	319.60	498.01	215.49	248.46	350.41	202.04	192.53	198.48	199.59	306.75	246.91	409.89	258.83	366.48	244.84	418.81	355.02	187.86
44	E2_Dc	KnownBoundary	0	332.85	231.81	191.42	533.84	977.81	238.61	376.02	361.20	240.88	279.50	232.32	257.98	537.53	162.30	278.65	285.26	153.69	31.98	0.00	123.14	174.52	256.99	287.62	172.03	314.41	249.33	276.86	327.24	183.39
45	ER2d	ExonRegion	0	236.05	307.60	179.08	492.47	1243.68	305.99	360.15	270.41	417.11	322.93	290.18	293.35	440.17	173.58	279.18	297.74	198.50	172.87	233.84	154.75	236.70	171.70	276.42	271.06	297.57	205.89	376.77	364.02	162.21
46	ER2e	ExonRegion	0	0.00	0.00	3.37	7.31	9.96	2.75	2.02	1.84	2.25	1.44	1.19	0.00	6.50	0.00	0.00	0.00	1.00	2.73	0.00	0.00	0.00	0.00	3.62	0.00	0.00	9.43	10.99	4.89	4.03
47	IG50_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	2.53	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00