Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TP53I3	Gene	0	54.42	27.66	70.45	56.14	13.68	43.76	33.17	16.57	20.72	28.44	13.99	17.96	43.54	25.10	27.70	45.94	28.81	30.20	10.71	17.78	26.21	28.99	34.82	28.09	41.11	31.97	31.67	18.37	41.76
2	470636	Transcript	0	0.00	0.00	0.21	0.00	0.61	0.68	0.25	0.00	0.42	0.18	0.30	0.46	0.40	0.17	0.00	1.23	1.30	0.48	0.00	0.34	0.53	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00
3	335934	Transcript	0	0.00	0.00	0.22	0.00	1.14	0.73	0.00	0.00	0.87	0.00	0.00	0.00	0.00	0.40	0.00	0.04	1.72	0.23	0.00	0.70	0.00	0.00	0.23	1.04	0.00	0.00	1.37	1.93	0.12
4	238721	Transcript	0	17.31	1.55	3.12	4.99	1.13	1.54	5.39	1.31	3.02	1.81	0.76	3.69	1.62	3.76	6.36	10.56	8.97	7.51	0.00	2.44	1.58	1.73	0.71	4.01	3.44	1.72	0.42	1.07	1.01
5	313482	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	417886	Transcript	0	5.43	0.00	11.54	19.63	0.00	0.00	5.84	0.00	1.31	3.52	1.27	0.00	1.50	3.92	0.00	7.27	2.12	0.00	0.00	0.00	3.53	0.00	2.51	2.27	3.79	3.35	5.91	2.02	0.00
7	407482	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	413037	Transcript	1	30.95	1.44	35.14	152.76	20.47	17.48	39.93	5.02	9.33	6.37	5.48	3.46	6.37	7.88	22.17	14.98	6.12	11.66	4.46	28.61	10.34	5.06	17.66	24.96	5.52	5.10	9.53	8.95	24.97
9	ER1a	ExonRegion	0	0.00	0.00	0.42	0.00	1.22	1.37	0.50	0.00	0.84	0.36	0.59	0.92	0.80	0.34	0.00	2.47	2.60	0.96	0.00	0.69	1.06	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00
10	E1_Da	NovelBoundary	0	5.43	4.85	2.84	0.00	6.19	1.80	0.00	4.58	2.77	11.10	1.61	1.39	4.71	0.00	0.00	0.00	7.05	0.00	0.00	0.00	5.33	0.00	0.00	7.84	6.82	0.00	2.34	0.00	0.00
11	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	Ix	Intron	0	0.71	2.12	2.75	0.00	3.21	1.36	0.00	1.82	2.03	2.38	0.00	0.00	0.43	1.78	0.00	4.08	7.37	1.90	2.10	0.65	0.94	0.00	0.59	4.25	0.47	1.03	0.00	0.00	0.00
13	Ix_SR1	SilentIntronRegion	0	1.02	1.69	2.45	0.00	3.75	1.39	0.00	0.06	2.10	2.34	0.00	0.00	0.15	2.41	0.00	1.43	6.93	1.01	1.96	0.00	0.35	0.00	0.95	4.55	0.66	0.49	0.00	0.00	0.00
14	Ix_AR1	ActiveIntronRegion	0	0.19	2.88	3.31	0.00	2.36	1.33	0.00	4.84	1.95	2.48	0.00	0.00	0.91	0.75	0.00	8.66	8.24	3.45	2.38	1.73	1.95	0.00	0.00	3.81	0.15	1.99	0.00	0.00	0.00
15	E2_Aa	NovelBoundary	0	5.54	0.00	1.52	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	2.95	0.00	3.28	0.00	0.00	6.24	0.00	0.00	0.00	2.01	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2a	ExonRegion	0	0.00	0.00	0.45	0.00	2.28	0.08	0.00	0.00	0.61	0.00	0.00	0.00	0.00	0.80	0.00	0.07	2.43	0.47	0.00	0.00	0.00	0.00	0.46	2.09	0.00	0.00	0.00	0.61	0.23
17	E2_Ab	KnownBoundary	0	0.00	0.00	1.10	0.00	11.20	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	4.74	0.00	0.00	7.88	0.00	0.00	0.00	0.00	0.00	1.92	5.62	0.00	0.00	0.00	1.93	0.00
18	ER2b	ExonRegion	0	3.19	2.23	2.21	0.00	7.23	3.27	1.46	0.00	3.24	1.56	2.69	0.79	0.32	2.54	0.73	4.51	5.69	3.62	1.02	0.32	2.42	0.00	1.05	3.33	1.38	2.21	0.43	0.97	0.94
19	E2_Ac	KnownBoundary	0	2.24	0.00	2.42	0.00	13.41	6.64	5.03	0.00	4.20	5.27	0.00	0.00	1.62	3.50	0.00	7.11	8.55	4.62	0.00	0.00	7.22	0.00	4.83	3.05	5.08	8.20	2.09	1.62	3.33
20	ER2c	ExonRegion	0	18.49	17.21	46.96	81.22	15.74	16.04	19.62	0.59	11.59	10.41	4.08	16.69	20.18	9.92	17.47	37.79	20.76	25.55	4.34	9.07	12.78	11.20	29.75	6.57	11.07	30.47	18.22	5.65	32.36
21	E2_Ad	KnownBoundary	0	29.79	18.32	98.21	21.57	7.37	17.69	27.29	2.54	5.48	19.09	3.04	18.98	18.60	17.84	27.90	41.92	31.81	10.02	16.18	12.40	15.08	19.35	37.23	14.59	20.80	59.18	29.52	23.09	48.83
22	ER2d	ExonRegion	0	14.94	6.66	70.78	24.17	4.29	9.70	12.71	1.38	4.12	10.27	7.14	9.72	15.52	13.61	7.78	21.72	18.89	14.63	9.68	10.62	9.75	18.93	18.03	10.22	13.10	35.41	19.59	17.84	48.99
23	E2_Da	KnownBoundary	0	3.01	0.00	7.62	0.00	6.78	5.06	4.98	0.00	1.55	3.44	5.98	0.00	5.35	2.81	0.00	3.21	2.07	14.64	0.00	6.86	1.89	8.41	2.22	2.57	7.01	3.48	2.34	6.20	18.03
24	E2_Db	KnownBoundary	0	14.10	0.00	2.67	31.28	0.00	1.96	4.69	0.00	0.00	2.04	0.00	3.95	3.12	3.12	8.17	3.82	3.42	4.62	0.00	3.89	3.93	2.43	0.00	8.61	0.00	2.19	0.00	2.16	0.00
25	E2b_E2f	KnownJunction	0	18.99	8.63	31.82	92.10	0.00	10.67	17.79	2.14	2.89	4.91	5.35	4.64	19.90	5.05	0.00	25.17	6.51	0.00	16.18	7.28	9.39	31.21	20.73	10.17	15.19	27.94	37.92	19.05	70.12
26	E2b_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.49	0.00
27	ER2e	ExonRegion	0	23.10	3.28	40.08	76.78	0.00	10.77	15.34	1.23	3.56	6.98	8.73	5.84	19.63	8.42	3.11	21.37	11.58	16.83	9.81	9.84	9.43	26.34	14.67	10.04	15.01	24.97	26.66	15.58	59.88
28	ER2f	ExonRegion	0	17.31	1.55	3.12	4.99	1.13	1.54	5.39	1.31	3.02	1.81	0.76	3.69	1.62	3.76	6.36	10.56	8.97	7.51	0.00	2.44	1.58	1.73	0.71	4.01	3.44	1.72	0.42	1.07	1.01
29	E2_Ae	KnownBoundary	0	16.75	0.00	5.13	0.00	0.00	0.00	10.30	1.84	0.00	1.88	1.39	3.04	1.24	3.57	0.00	10.10	4.70	19.14	0.00	3.97	0.00	2.14	2.41	3.05	3.79	1.93	0.00	1.71	1.45
30	ER2g	ExonRegion	0	15.53	3.50	14.61	44.93	7.00	8.91	7.62	4.44	4.07	5.49	1.45	2.16	5.23	4.04	5.48	11.43	8.18	17.86	4.53	6.56	6.32	6.55	5.93	5.65	7.58	8.99	2.88	9.48	9.86
31	E2_Af	KnownBoundary	0	19.47	4.56	11.41	109.57	13.12	10.32	5.32	6.52	4.66	5.59	3.04	1.54	3.12	5.61	9.97	5.66	6.75	18.49	0.00	18.61	9.35	12.98	2.51	11.54	10.49	9.57	4.82	17.34	23.97
32	E2_Ag	KnownBoundary	0	17.99	0.00	13.85	43.14	0.00	5.87	2.92	0.00	3.78	0.00	0.00	3.19	3.60	2.50	0.00	3.82	0.00	0.00	0.00	4.13	4.05	2.48	0.00	0.00	1.93	0.00	0.00	0.00	2.05
33	E2_Ah	KnownBoundary	0	38.40	9.70	75.14	154.87	29.33	21.79	28.66	6.92	7.31	18.61	18.92	9.88	26.72	14.42	7.97	33.89	16.95	4.62	0.00	12.40	11.79	26.11	15.51	15.79	35.20	35.23	15.70	30.10	43.71
34	ER2h	ExonRegion	0	61.30	16.42	88.19	241.32	39.85	34.37	37.90	11.05	10.11	25.70	18.09	14.10	33.77	18.32	11.20	46.06	24.64	25.11	40.73	28.11	22.82	44.71	21.70	17.64	39.74	48.72	41.39	36.84	86.17
35	ER2i	ExonRegion	0	66.59	15.55	93.95	239.37	34.87	30.24	36.15	9.45	10.11	22.91	18.01	14.18	33.77	18.26	14.56	50.45	27.31	14.92	32.28	20.24	21.40	42.42	23.27	20.65	38.78	45.68	38.46	35.64	77.04
36	ER2j	ExonRegion	0	80.45	32.96	64.57	59.22	11.56	36.30	48.64	21.22	15.35	29.36	12.67	17.64	42.39	26.57	27.18	62.25	35.51	37.38	10.31	24.97	25.42	42.35	34.98	26.17	34.23	53.04	10.96	21.11	49.65
37	E2_Dc	NovelBoundary	0	4.72	0.00	2.94	0.00	0.00	1.65	0.00	0.00	2.92	0.00	0.00	1.51	0.00	1.09	0.00	3.67	0.00	4.62	0.00	0.00	2.05	0.00	0.00	2.45	0.00	0.00	0.00	2.02	0.00
38	E2c_E3a	KnownJunction	0	138.50	42.85	43.73	58.45	13.71	74.82	106.13	48.72	32.98	69.23	11.14	26.81	79.23	44.87	25.51	73.97	54.34	69.22	32.15	43.00	44.12	64.08	82.74	43.43	76.30	146.94	28.28	62.68	103.79
39	E3_Aa	NovelBoundary	0	5.66	0.00	2.64	10.78	0.00	0.00	0.00	0.00	0.00	1.76	0.00	4.40	1.24	3.30	0.00	0.00	4.82	9.25	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	0.00	1.68
40	ER3a	ExonRegion	0	106.84	41.93	126.40	114.40	9.80	53.23	51.18	38.00	25.02	46.72	20.02	36.61	71.99	47.04	55.79	73.27	57.41	54.35	22.66	35.74	28.83	48.90	56.13	37.56	62.59	75.26	52.34	45.71	89.54
41	E3_Da	KnownBoundary	0	107.18	45.18	184.89	202.75	11.05	49.07	50.52	47.03	32.55	46.38	10.95	25.90	90.82	40.28	32.09	66.17	51.57	61.65	8.09	30.76	25.27	43.56	54.67	45.94	59.29	66.43	33.10	23.90	62.73
42	E3a_E4a	KnownJunction	0	5.43	0.00	11.54	19.63	0.00	0.00	5.84	0.00	1.31	3.52	1.27	0.00	1.50	3.92	0.00	7.27	2.12	0.00	0.00	0.00	3.53	0.00	2.51	2.27	3.79	3.35	5.91	2.02	0.00
43	ER3b	ExonRegion	0	129.24	46.84	181.20	211.25	43.20	70.70	58.51	49.73	41.55	55.01	22.57	30.59	82.33	56.93	68.27	85.76	52.01	60.87	24.46	35.57	37.89	67.82	61.37	58.04	84.12	40.35	41.38	30.41	54.64
44	E3_Db	NovelBoundary	0	5.49	0.00	0.00	0.00	0.00	3.45	0.00	2.54	0.00	5.43	0.00	4.55	0.00	0.84	8.37	3.82	9.84	9.25	0.00	0.00	0.00	0.00	0.00	6.10	1.63	0.00	0.00	3.50	0.00
45	E3b_E4a	KnownJunction	0	111.78	87.26	166.90	167.16	33.16	86.75	56.30	44.89	51.98	77.93	29.80	41.72	71.30	48.61	61.99	96.16	39.84	46.23	8.09	49.87	75.41	58.97	76.63	56.94	121.01	44.33	78.62	47.99	69.66
46	E3b_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	Ix	Intron	0	4.52	2.76	0.83	5.93	2.63	2.96	2.42	1.45	4.15	2.27	1.62	1.45	1.34	3.20	2.99	6.23	7.60	3.81	0.53	1.42	1.48	0.89	1.05	3.20	1.60	2.02	1.21	1.96	1.38
48	Ix_SR1	SilentIntronRegion	0	4.53	2.76	0.83	5.94	2.63	2.96	2.42	1.45	4.15	2.27	1.63	1.45	1.34	3.21	3.00	6.24	7.61	3.82	0.53	1.42	1.48	0.90	1.05	3.21	1.60	2.02	1.21	1.96	1.38
49	E4_Aa	NovelBoundary	0	8.61	0.00	4.58	0.00	5.75	5.56	0.00	7.07	3.35	0.00	0.00	0.00	1.72	2.22	0.00	0.00	15.87	0.00	0.00	3.39	1.52	0.00	0.00	2.39	1.63	0.00	0.00	1.80	3.40
50	ER4a	ExonRegion	0	144.63	63.63	188.34	94.24	20.96	157.41	103.28	51.65	57.80	91.93	43.70	53.80	124.36	69.47	78.78	123.96	64.27	67.78	27.86	63.29	97.15	67.34	107.28	83.89	116.07	79.09	110.81	54.90	111.01
51	E4_Da	KnownBoundary	0	25.36	4.75	45.10	29.33	0.00	6.79	15.68	4.83	5.06	1.88	10.50	0.00	4.59	7.98	9.37	3.75	15.46	4.62	0.00	8.27	5.54	0.00	3.74	13.52	3.33	8.75	12.57	7.95	17.79
52	E4a_E5a	KnownJunction	0	137.38	100.83	135.56	52.20	7.07	164.67	95.55	16.77	68.52	103.06	49.76	51.60	116.39	71.39	78.53	128.75	69.94	75.26	16.18	45.15	99.71	68.26	154.55	69.45	137.30	61.50	154.41	43.04	103.20
53	E4a_E6a	KnownJunction	1	9.02	4.56	2.59	31.71	0.00	16.65	10.76	0.00	1.25	20.85	10.79	10.42	12.39	7.89	0.00	7.11	7.99	0.00	8.09	0.00	0.00	2.48	8.47	2.81	5.46	10.34	0.00	32.53	11.65
54	ER4b	ExonRegion	0	30.95	1.44	35.14	152.76	20.47	17.48	39.93	5.02	9.33	6.37	5.48	3.46	6.37	7.88	22.17	14.98	6.12	11.66	4.46	28.61	10.34	5.06	17.66	24.96	5.52	5.10	9.53	8.95	24.97
55	E4_Db	NovelBoundary	0	0.00	0.00	6.90	0.00	28.00	0.00	0.00	0.00	1.46	5.83	0.00	1.48	2.87	1.99	0.00	0.00	4.16	0.00	0.00	0.00	0.00	0.00	0.00	2.87	7.35	0.00	0.00	1.80	0.00
56	E5_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	5.63	1.61	0.00	0.00	0.00	0.00	3.82	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.60	0.00	0.00	1.82
57	ER5a	ExonRegion	0	110.75	74.58	183.82	78.28	29.67	132.15	77.12	31.91	48.10	68.14	36.83	38.67	125.44	61.91	46.05	101.23	66.83	57.84	14.36	27.18	74.57	72.08	86.25	62.17	101.66	56.97	93.58	27.44	102.31
58	E5_Da	KnownBoundary	0	107.71	82.50	226.30	50.26	52.61	127.34	32.56	43.40	37.76	73.86	34.64	36.41	104.32	58.76	16.54	90.73	52.40	69.35	40.46	24.56	77.73	66.61	58.85	66.51	102.14	43.94	74.84	20.22	96.27
59	ER5b	ExonRegion	0	85.33	80.48	164.60	39.46	28.26	111.61	48.20	23.93	49.22	61.73	40.30	41.52	113.78	58.08	41.43	121.56	64.89	64.23	23.18	26.02	65.79	63.13	83.83	77.89	120.16	76.60	90.12	26.25	82.27
60	E5_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	1.51	1.43	2.61	0.00	3.82	4.64	0.00	0.00	0.00	5.58	0.00	1.97	8.31	0.00	5.66	0.00	0.00	7.96
61	E5b_E6a	KnownJunction	0	74.62	89.49	119.32	28.26	21.37	106.78	60.42	22.89	56.92	70.10	34.86	43.04	117.73	52.58	48.63	121.71	69.28	55.48	24.28	27.95	55.79	60.97	108.00	54.31	83.08	57.98	107.55	39.32	94.32
62	Ix	Intron	0	1.25	0.63	1.30	0.00	0.00	3.21	0.78	0.00	1.31	1.69	1.39	0.36	0.38	1.41	0.00	1.93	3.20	1.88	1.24	0.00	0.83	0.00	0.70	0.42	0.56	1.22	0.00	0.32	0.91
63	Ix_SR1	SilentIntronRegion	0	1.26	0.63	1.31	0.00	0.00	3.24	0.79	0.00	1.32	1.70	1.40	0.36	0.38	1.42	0.00	1.95	3.22	1.89	1.25	0.00	0.84	0.00	0.71	0.42	0.56	1.23	0.00	0.32	0.92
64	Ix	Intron	0	1.53	0.00	1.20	0.00	0.58	2.62	0.24	0.00	1.00	1.03	0.71	0.37	0.15	0.65	4.06	2.28	1.78	3.21	1.52	0.00	0.68	0.43	0.65	0.77	1.02	0.56	0.22	0.39	0.72
65	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.94	0.00	0.00	2.84	0.00	0.00	0.95	1.08	0.00	0.58	0.00	0.85	3.46	2.33	1.96	4.33	1.20	0.00	0.80	0.34	0.00	0.40	0.54	0.00	0.00	0.31	0.63
66	Ix_AR1	ActiveIntronRegion	0	4.23	0.00	1.65	0.00	1.61	2.26	0.66	0.00	1.11	0.95	1.96	0.00	0.43	0.30	5.13	2.22	1.47	1.27	2.10	0.00	0.47	0.59	1.78	1.42	1.88	1.55	0.60	0.54	0.88
67	E6_Aa	NovelBoundary	0	8.49	0.00	1.54	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	2.92	3.95	0.84	0.00	0.00	3.94	0.00	0.00	0.00	1.52	0.00	2.41	2.99	0.00	2.02	0.00	9.17	0.00
68	ER6a	ExonRegion	0	85.84	62.59	84.87	53.65	17.40	78.76	58.13	30.09	56.00	55.31	30.68	38.68	112.72	51.64	55.44	84.01	60.54	62.54	23.65	19.15	48.12	62.07	73.52	46.67	105.82	74.63	63.36	36.92	97.70
69	E6_Da	KnownBoundary	0	62.94	53.52	60.02	19.20	11.94	57.51	21.57	19.91	32.28	34.87	13.95	14.58	81.36	31.42	47.24	74.43	45.40	65.50	24.28	30.52	23.50	60.92	32.21	40.73	83.01	40.38	43.83	23.09	59.79
70	ER6b	ExonRegion	0	45.95	39.52	67.48	35.79	17.94	25.59	21.52	8.75	19.16	24.24	7.87	11.00	24.83	14.46	27.69	34.46	18.76	27.97	9.69	7.78	12.82	29.31	25.30	28.11	34.95	22.90	22.23	13.48	22.35
71	ER6c	ExonRegion	0	4.29	0.00	2.24	0.00	0.00	1.37	0.00	0.00	1.12	1.44	0.00	0.00	0.00	0.00	0.00	2.53	1.00	8.19	0.00	2.81	0.00	1.80	0.00	4.30	1.43	0.00	3.66	3.26	1.34
72	ER6d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	1.41	0.00	0.00	0.00	0.00	0.00	0.00	2.75	3.26	0.00