Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CTA-217C2.1	Gene	0	45.55	49.00	14.02	108.95	28.00	37.92	110.40	36.40	57.54	47.24	24.29	15.40	28.61	21.41	171.29	32.96	79.90	22.28	39.45	121.04	20.19	47.71	20.01	83.23	79.66	55.52	48.61	41.05	11.87
2	426282	Transcript	0	26.88	26.50	10.05	51.98	16.59	27.90	70.35	29.23	26.99	29.53	16.66	11.41	25.02	14.11	131.00	22.23	43.06	12.70	23.01	79.97	12.37	29.29	20.03	43.25	47.20	49.88	27.07	34.71	8.74
3	432502	Transcript	0	0.43	0.99	0.00	0.00	0.00	0.00	0.20	0.00	0.11	1.01	0.00	0.00	0.26	0.00	6.89	0.00	0.50	0.55	0.00	0.56	1.14	3.06	0.18	0.00	1.86	0.31	0.92	0.82	1.88
4	IG34	Intergenic	0	3.71	0.00	0.00	12.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	0.00	2.76	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	2.82	0.00
5	IG34_SR1	SilentIntergenicRegion	0	3.63	0.00	0.00	12.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.74	0.00	0.00	0.00	4.18	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	2.88	0.00
6	IG34_AR1	ActiveIntergenicRegion	0	4.29	0.00	0.00	12.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	2.99	0.00
7	ER1a	ExonRegion	0	21.73	3.98	15.68	110.46	14.26	6.26	37.28	13.73	12.99	10.96	6.88	8.61	11.82	7.95	53.87	11.60	24.18	16.20	6.26	23.58	4.53	27.11	14.95	4.13	11.33	29.31	19.04	17.40	8.76
8	E1_Ab	KnownBoundary	0	26.54	11.92	5.71	113.02	32.27	9.44	57.73	4.18	8.40	19.77	11.10	15.60	0.00	6.47	80.53	13.39	36.62	18.49	8.09	34.90	5.98	30.92	11.57	8.02	12.01	82.65	32.10	15.23	13.44
9	ER1b	ExonRegion	0	10.06	9.53	4.54	34.96	9.11	2.58	19.76	3.37	4.77	11.13	3.03	6.31	3.15	4.38	29.92	4.75	19.64	9.59	7.40	18.99	3.83	27.59	3.86	6.37	9.38	24.05	6.77	7.26	6.12
10	E1_Da	NovelBoundary	0	2.42	0.00	1.54	0.00	0.00	3.64	15.22	4.98	1.89	2.04	0.00	0.00	1.24	3.68	0.00	0.00	2.77	0.00	0.00	0.00	0.00	8.46	2.07	0.00	5.30	0.00	0.00	4.58	2.58
11	E1a_E2a	KnownJunction	0	0.00	3.97	0.97	0.00	0.00	0.00	2.80	4.58	0.00	1.80	0.00	0.00	2.55	0.00	7.77	0.00	1.10	0.00	8.09	14.47	0.00	8.75	2.46	3.05	0.00	3.35	0.00	0.00	0.00
12	E1a_E3a	NovelJunction	0	0.00	4.17	0.00	0.00	0.00	0.00	7.50	2.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	0.00	10.14	0.00	0.00
13	E1_Db	NovelBoundary	0	28.08	3.97	2.04	10.35	0.00	3.49	37.65	7.27	7.55	5.99	0.00	0.00	4.97	4.48	16.94	21.34	5.31	0.00	8.09	22.33	7.62	21.25	4.04	8.31	1.89	39.01	7.75	6.56	6.73
14	E1b_E2a	NovelJunction	0	2.60	0.00	0.00	0.00	0.00	0.00	2.23	0.00	0.00	0.00	0.00	0.00	0.00	1.02	8.17	0.00	0.00	0.00	0.00	0.00	0.00	2.38	2.36	0.00	0.00	0.00	0.00	0.00	0.00
15	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1c	ExonRegion	0	0.86	1.97	0.00	0.00	0.00	0.00	0.40	0.00	0.22	2.02	0.00	0.00	0.52	0.00	5.60	0.00	1.00	1.09	0.00	1.12	2.28	6.13	0.36	0.00	3.72	0.63	1.83	1.63	3.76
17	I1	Intron	0	4.10	5.68	1.35	3.13	1.44	3.67	1.58	1.11	4.97	6.85	2.76	2.33	1.62	2.19	6.90	4.47	9.42	5.60	3.97	3.08	4.41	0.96	0.99	5.45	3.55	1.98	2.10	2.44	0.91
18	I1_AR1	ActiveIntronRegion	0	5.30	4.49	2.06	8.85	2.68	2.63	2.21	2.52	5.77	6.13	0.82	1.86	2.85	3.66	5.42	3.06	9.82	13.28	3.94	5.95	3.91	1.73	0.74	5.90	4.31	3.45	1.00	5.14	1.45
19	I1_SR1	SilentIntronRegion	0	6.29	8.05	2.73	4.43	1.73	5.49	2.05	1.95	6.60	8.76	4.78	3.21	2.06	3.39	7.99	5.82	13.27	8.90	5.50	4.58	6.32	1.31	1.52	7.02	5.74	2.70	2.83	2.62	1.52
20	I1_AR2	ActiveIntronRegion	0	6.70	6.22	2.02	2.89	1.97	4.57	3.25	1.67	6.67	15.28	3.60	2.80	4.70	4.33	6.95	8.83	13.39	14.95	6.76	2.98	5.46	1.45	2.00	6.94	4.18	2.85	6.28	5.60	0.74
21	I1_SR2	SilentIntronRegion	0	2.46	3.87	0.59	3.61	3.16	1.58	1.57	0.65	2.96	3.93	1.53	2.93	0.20	1.40	4.83	4.35	5.61	4.13	3.47	3.03	2.19	0.54	0.91	3.69	1.87	2.42	1.47	2.32	0.55
22	I1_AR3	ActiveIntronRegion	0	5.71	8.35	1.15	5.63	3.41	6.09	2.07	1.63	5.11	8.48	2.16	3.24	3.55	1.90	11.55	8.97	10.15	4.86	3.88	2.82	8.04	0.71	1.77	11.78	5.60	1.75	0.72	4.43	0.39
23	I1_AR4	ActiveIntronRegion	0	1.35	2.29	0.00	0.00	4.87	0.77	0.00	0.00	2.01	5.07	2.05	1.50	3.35	2.13	8.08	3.59	4.92	4.51	7.68	2.94	3.38	0.04	0.00	10.11	5.38	1.21	0.00	1.90	1.47
24	I1_AR5	ActiveIntronRegion	0	7.35	9.85	0.00	0.00	6.40	3.27	0.00	0.00	9.42	11.89	1.47	2.47	3.96	1.86	33.34	12.53	14.93	14.17	11.64	6.83	7.27	3.35	0.00	18.34	8.10	1.27	0.00	4.89	1.34
25	I1_SR3	SilentIntronRegion	0	2.41	4.49	0.11	1.29	0.73	2.83	0.91	0.37	5.15	5.26	2.23	1.66	0.96	1.24	6.35	3.07	7.36	1.54	3.05	1.95	3.24	0.45	0.41	3.89	1.59	0.96	1.69	1.57	0.49
26	I1_AR6	ActiveIntronRegion	0	2.39	4.08	1.59	1.14	0.00	1.74	1.28	0.29	1.42	2.52	0.94	1.37	0.41	0.29	4.80	1.18	4.49	1.83	1.01	1.75	0.45	1.71	0.86	4.09	3.62	1.24	0.00	1.03	0.64
27	I1_SR4	SilentIntronRegion	0	1.79	3.59	0.70	2.14	0.29	2.29	0.96	0.33	1.30	4.04	0.78	1.47	0.42	0.86	5.91	2.37	5.96	0.92	1.71	1.31	3.65	0.75	0.54	3.33	2.30	1.69	0.98	1.17	0.68
28	E2_Aa	NovelBoundary	0	0.00	0.00	5.73	0.00	0.00	7.87	2.46	0.00	6.24	0.00	0.00	3.92	5.22	5.47	8.37	2.91	9.61	0.00	8.09	20.01	1.56	1.99	0.00	2.57	5.08	3.52	8.00	6.87	3.20
29	ER2a	ExonRegion	0	27.47	29.39	7.03	19.66	10.28	28.50	57.50	39.00	17.22	25.66	13.37	7.71	31.50	13.45	111.65	20.11	32.30	11.77	19.27	72.32	12.93	44.12	25.82	38.17	45.51	55.60	22.81	29.74	4.86
30	E2_Da	NovelBoundary	1	21.12	20.07	15.67	10.35	0.00	8.63	4.63	0.00	25.03	31.16	1.46	9.34	4.33	20.92	33.49	7.34	43.65	9.25	0.00	38.87	20.02	8.99	2.31	13.22	9.81	9.70	28.13	20.22	9.67
31	E2a_E3a	KnownJunction	0	39.87	36.16	15.32	0.00	19.75	51.07	121.18	60.12	24.27	51.57	36.32	24.97	62.73	25.30	263.10	42.07	61.54	14.64	32.37	135.71	17.65	30.43	40.14	51.50	92.36	110.72	39.41	75.89	16.24
32	E3_Aa	NovelBoundary	0	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.17	3.52	0.00	0.00	3.25	0.00	0.00	0.00	2.45	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	2.19	0.00	4.54	0.00
33	ER3a	ExonRegion	0	60.99	61.24	19.06	119.02	28.24	39.08	133.04	54.04	63.97	56.77	31.95	19.76	47.51	26.85	192.16	41.35	97.86	29.20	48.05	141.51	22.17	67.60	25.92	91.02	108.06	72.08	62.72	46.07	13.15
34	E3_Da	KnownBoundary	0	26.90	25.79	9.64	149.47	19.75	67.30	167.30	24.73	46.56	78.53	41.63	25.45	16.15	24.13	209.68	41.54	91.66	27.74	72.83	144.48	24.23	15.56	18.42	121.25	72.85	32.19	37.57	39.00	6.37
35	ER3b	ExonRegion	0	45.33	59.00	11.26	129.80	38.64	53.69	132.96	28.74	80.49	57.68	26.73	15.74	16.51	23.87	218.59	37.38	96.16	20.90	49.04	153.78	26.75	36.03	16.76	119.41	86.81	50.43	54.11	50.53	13.82
36	IG33_AR4	ActiveIntergenicRegion	0	13.48	23.50	2.27	25.17	8.24	14.12	24.34	7.15	18.80	9.88	0.00	0.00	2.52	3.68	70.76	4.14	1.10	10.55	14.27	29.13	2.39	6.83	4.94	32.68	16.96	7.47	20.75	3.73	1.47
37	IG33_AR3	ActiveIntergenicRegion	0	17.15	13.14	2.24	12.19	4.98	7.56	18.48	7.67	15.54	9.87	0.00	0.00	0.00	5.44	44.80	0.00	1.00	2.73	13.58	37.94	1.43	7.51	1.81	25.81	22.87	11.00	14.65	3.26	1.34