Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TCF20	Gene	0	25.48	94.23	81.89	20.44	28.68	87.22	12.54	29.25	70.22	127.51	97.69	62.54	61.07	139.78	19.32	79.11	82.75	104.61	67.10	22.93	118.55	49.43	103.54	73.74	73.13	110.54	73.00	82.51	49.52
2	359486	Transcript	0	4.15	30.39	10.82	3.26	5.30	20.55	4.37	4.75	51.92	41.37	17.35	9.87	21.69	32.43	12.33	25.51	19.74	28.20	17.12	6.62	34.26	11.90	22.34	42.88	21.35	28.44	26.25	35.72	27.52
3	335626	Transcript	0	5.60	60.01	9.14	26.53	0.00	22.52	2.35	7.02	66.69	37.63	18.47	22.05	28.66	29.20	34.68	9.64	17.98	32.62	32.37	11.58	23.30	28.44	7.04	21.71	31.52	30.55	24.30	21.30	12.78
4	396348	Transcript	0	0.00	1.85	0.40	0.00	0.00	1.08	0.00	0.00	0.32	0.00	0.00	0.71	0.09	0.06	0.00	0.00	0.43	0.97	5.50	0.00	0.20	0.00	0.39	0.46	0.82	1.80	0.52	0.47	0.00
5	418801	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	404876	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	IG40_AR6	ActiveIntergenicRegion	0	0.00	0.60	0.91	0.00	0.64	0.88	0.00	0.00	0.95	1.99	1.25	0.56	0.40	2.18	5.16	0.97	2.71	0.75	4.25	0.72	5.09	1.41	1.18	1.68	1.31	1.83	0.48	2.08	0.35
8	IG40_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	1.80	0.00	0.00	1.04	0.00	0.00	0.00	1.59	1.63	0.00	0.00	0.00	2.36	0.00	0.00	0.00	0.72	0.00	0.00	0.00	0.00
9	IG40_AR2	ActiveIntergenicRegion	0	0.43	1.33	0.11	0.46	0.00	0.26	0.00	0.12	2.96	1.67	0.23	0.96	0.46	0.23	0.89	0.48	1.75	0.12	0.20	0.18	0.46	0.00	0.23	0.98	0.77	0.30	0.00	0.73	0.30
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1c	ExonRegion	0	29.66	95.51	92.18	20.76	30.76	95.10	12.52	33.00	47.09	140.98	111.06	70.30	57.29	163.22	13.74	89.12	89.64	116.25	72.38	26.12	124.21	55.78	118.01	67.28	77.81	112.85	75.80	84.77	44.22
13	E1_Ad	KnownBoundary	0	20.64	124.68	91.06	69.02	37.87	70.02	8.24	43.94	142.30	117.96	69.94	70.24	65.28	144.35	48.83	47.74	96.27	94.52	129.25	7.11	118.17	75.36	112.24	101.27	83.39	142.30	61.48	81.06	65.43
14	ER1d	ExonRegion	0	29.17	99.97	130.24	35.95	34.41	101.09	19.02	35.75	106.35	141.00	95.57	72.25	98.64	143.30	31.20	58.24	103.92	116.04	66.54	24.19	153.68	49.67	116.97	108.59	88.93	166.87	86.78	119.81	55.76
15	E1_Da	NovelBoundary	0	3.01	0.00	1.45	0.00	0.00	0.00	0.00	2.19	1.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	0.00	5.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1a_E2a	KnownJunction	1	12.86	109.65	112.64	8.84	35.22	140.69	21.28	30.46	148.06	205.32	135.14	134.58	176.45	200.43	93.68	88.05	182.73	183.14	72.83	33.41	165.29	39.28	202.96	120.11	102.67	377.09	83.24	252.20	106.34
17	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.30	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E1a_E6a	NovelJunction	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I1_AR1	ActiveIntronRegion	0	0.09	0.45	0.00	0.00	0.00	0.26	0.00	0.00	0.16	3.23	0.00	0.43	1.34	0.38	0.77	0.00	1.15	0.00	0.90	0.00	1.27	0.00	0.25	0.00	0.00	0.40	0.00	0.92	0.00
20	I1_AR2	ActiveIntronRegion	0	0.00	1.19	0.00	0.00	0.00	0.22	0.00	0.59	2.49	2.15	0.00	0.40	0.00	0.01	1.18	0.00	0.92	0.21	1.03	0.59	0.61	0.00	0.00	0.00	0.00	1.01	0.00	0.00	0.00
21	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00	0.00	8.37	0.00	2.79	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	4.38	0.00	2.29	0.00
22	ER2a	ExonRegion	0	23.92	107.11	88.86	20.15	28.78	129.42	20.44	50.20	166.45	155.08	101.68	98.94	146.13	165.28	67.33	69.08	149.20	116.13	75.21	30.23	139.15	65.65	125.81	145.07	95.90	257.38	84.68	155.55	95.39
23	E2_Da	NovelBoundary	0	8.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	1.93	0.00	2.29	0.00
24	E2a_E3a	KnownJunction	0	21.53	131.56	51.92	0.00	12.97	112.03	8.47	28.67	125.98	155.23	78.90	58.76	70.03	131.32	58.60	61.12	117.07	178.00	113.29	23.24	99.55	56.25	109.38	112.39	104.49	197.79	98.90	103.97	106.77
25	I2_AR1	ActiveIntronRegion	0	0.83	0.00	0.45	0.00	0.00	0.25	0.00	0.33	1.07	2.45	0.00	0.00	0.41	0.00	0.83	0.67	2.02	0.17	1.45	0.00	0.91	0.32	0.32	0.77	0.26	0.14	0.00	0.43	0.00
26	I2_SR2	SilentIntronRegion	0	0.67	1.50	0.26	0.00	0.00	0.42	0.00	0.00	1.37	0.45	0.00	0.00	1.21	0.42	0.85	0.00	1.34	0.60	0.50	0.00	1.07	0.00	0.00	1.00	0.44	0.73	0.00	0.52	0.00
27	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.01	0.00	0.00	0.00	0.00	0.00	2.53	0.00	0.00
28	ER3a	ExonRegion	0	18.39	110.44	42.68	5.41	21.72	92.08	9.80	19.26	130.76	141.78	65.98	51.65	74.82	106.11	40.10	52.99	100.51	126.25	76.67	25.86	109.06	40.31	85.78	86.95	109.00	160.59	70.62	88.25	82.97
29	E3_Da	NovelBoundary	0	0.00	3.78	1.54	0.00	0.00	3.07	0.00	4.88	0.00	5.15	1.61	4.82	1.88	3.35	0.00	0.00	11.48	0.00	0.00	0.00	5.25	0.00	0.00	3.05	1.52	8.24	0.00	0.00	0.00
30	E3a_E5a	KnownJunction	1	2.36	8.34	9.17	0.00	0.00	8.44	2.35	2.44	25.09	55.05	1.23	2.65	10.03	31.93	9.37	22.11	12.99	27.74	0.00	8.27	17.69	9.82	20.09	34.57	11.67	18.67	23.16	53.60	23.04
31	E3a_E5b	KnownJunction	0	7.96	13.38	7.30	0.00	18.72	19.11	2.29	4.38	53.14	27.28	9.96	11.81	21.02	14.80	0.00	13.54	25.71	23.12	0.00	3.97	52.02	9.04	23.79	25.72	43.80	46.35	8.35	6.16	20.37
32	E3a_E6a	KnownJunction	0	5.60	60.01	9.14	26.53	0.00	22.52	2.35	7.02	66.69	37.63	18.47	22.05	28.66	29.20	34.68	9.64	17.98	32.62	32.37	11.58	23.30	28.44	7.04	21.71	31.52	30.55	24.30	21.30	12.78
33	E3_Db	NovelBoundary	0	0.00	9.70	0.00	0.00	0.00	1.92	0.00	2.54	1.40	1.72	0.00	0.00	0.00	2.95	0.00	2.91	6.10	0.00	0.00	0.00	3.93	0.00	0.00	2.63	0.00	0.00	0.00	0.00	0.00
34	ER3b	ExonRegion	0	0.00	3.28	0.80	0.00	0.00	2.16	0.00	0.00	0.64	0.00	0.00	1.41	0.19	0.13	0.00	0.00	0.86	1.95	10.99	0.00	0.41	0.00	0.77	0.92	1.63	3.59	1.05	0.93	0.00
35	I3	Intron	0	5.68	1.51	1.56	1.12	2.29	2.36	0.94	1.15	1.93	4.28	3.16	2.21	2.12	5.22	1.71	2.11	10.71	7.31	2.99	0.00	2.89	1.41	0.85	5.37	4.68	3.68	0.29	1.78	1.25
36	I3_AR1	ActiveIntronRegion	0	6.27	1.66	1.73	1.24	2.52	2.25	0.96	1.27	2.00	4.36	3.32	2.44	2.12	5.58	1.89	2.33	11.44	7.77	3.17	0.00	3.16	1.45	0.93	5.39	5.15	3.86	0.32	1.97	1.38
37	I3_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	3.74	0.89	0.00	1.44	4.16	1.86	0.00	2.49	2.03	0.00	0.00	4.29	3.27	1.45	0.00	0.40	1.15	0.00	5.77	0.11	2.26	0.00	0.00	0.00
38	ER4a	ExonRegion	0	0.00	0.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	I4	Intron	0	5.84	3.94	3.55	0.95	1.30	7.39	1.61	4.40	4.87	7.38	2.69	2.54	2.20	8.02	2.38	5.89	12.79	6.63	2.12	2.54	8.05	1.56	1.08	7.57	5.03	4.59	0.97	1.73	1.55
40	I4_SR1	SilentIntronRegion	0	6.75	3.09	3.80	0.67	0.92	6.46	1.51	5.19	3.38	5.58	2.27	2.47	2.76	7.40	2.85	4.41	11.64	5.60	1.86	2.02	8.16	1.69	0.97	6.67	5.18	4.46	0.57	1.65	1.67
41	I4_AR1	ActiveIntronRegion	0	3.67	6.07	2.97	1.64	2.23	9.73	1.86	2.52	8.56	11.84	3.73	2.75	0.84	9.60	1.26	9.54	15.68	9.20	2.78	3.83	7.85	1.24	1.35	9.83	4.72	4.96	1.97	1.96	1.29
42	E5_Aa	NovelBoundary	0	11.38	0.00	6.43	20.71	0.00	0.00	2.92	4.68	2.86	23.05	4.59	1.23	1.56	8.55	0.00	15.30	19.90	18.49	0.00	4.13	5.82	0.00	0.00	14.18	3.56	0.00	20.28	1.84	0.00
43	ER5a	ExonRegion	0	3.47	8.99	7.76	0.00	0.44	13.50	3.85	2.65	19.00	23.82	1.61	5.93	13.83	32.60	2.64	14.07	21.27	25.20	11.05	6.94	17.33	7.00	15.69	41.44	17.57	25.15	14.54	30.97	15.87
44	E5_Ab	KnownBoundary	0	7.49	9.40	6.55	0.00	0.00	18.65	5.15	6.57	18.73	10.31	1.30	8.28	15.79	37.22	0.00	6.88	20.10	23.89	0.00	4.13	12.88	0.00	13.40	54.49	21.29	26.95	6.71	15.64	9.97
45	ER5b	ExonRegion	0	7.03	28.97	9.36	0.00	4.28	27.80	5.56	7.51	32.60	42.22	10.02	22.61	26.06	38.86	5.49	7.54	49.45	63.81	14.84	7.93	41.91	14.64	29.62	57.91	42.05	57.58	6.56	36.97	17.93
46	E5_Da	KnownBoundary	0	2.36	39.75	6.15	0.00	6.34	32.88	5.03	11.30	14.43	38.43	12.05	19.49	11.81	31.93	18.34	0.00	47.49	95.30	24.28	3.39	35.18	12.88	22.75	42.77	22.35	45.32	2.34	35.14	11.46
47	ER5c	ExonRegion	0	2.19	37.85	4.64	0.00	0.00	25.06	4.31	1.92	19.36	21.43	5.41	12.09	11.40	21.83	5.47	6.27	34.40	74.99	9.67	9.26	36.60	5.94	20.47	36.28	36.42	29.40	1.46	15.45	10.04
48	E5_Db	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	1.46	0.00	2.54	1.28	1.80	0.00	0.00	0.00	8.60	0.00	5.74	4.91	0.00	0.00	3.14	1.85	0.00	1.87	0.00	3.83	1.76	0.00	0.00	0.00
49	E5b_E6a	KnownJunction	0	0.00	29.76	4.93	9.27	0.00	13.43	2.29	0.00	26.86	18.49	2.91	7.38	12.10	15.78	0.00	6.88	20.46	28.51	8.09	6.62	35.50	2.43	16.65	54.97	36.48	39.14	0.00	9.66	10.33
50	I5	Intron	0	6.52	4.62	3.96	1.68	1.43	4.83	1.42	3.15	5.89	7.67	2.40	3.15	2.64	8.53	4.04	6.86	14.18	8.81	4.03	2.63	5.07	2.50	1.68	6.57	4.29	5.43	0.66	4.05	1.93
51	I5_AR1	ActiveIntronRegion	0	2.10	2.58	1.19	0.00	0.87	3.92	0.18	0.66	2.50	3.73	1.59	1.65	0.69	4.56	0.82	6.01	6.26	8.13	3.42	1.72	5.72	2.41	1.29	3.45	2.42	2.94	0.16	2.62	0.48
52	I5_SR1	SilentIntronRegion	0	3.41	3.12	2.24	0.00	2.17	2.15	0.00	3.35	5.44	5.66	1.71	2.32	0.00	3.93	0.00	1.10	3.16	5.95	17.76	2.31	4.83	2.08	0.00	3.25	3.08	12.61	1.83	6.14	1.14
53	I5_AR2	ActiveIntronRegion	0	5.67	2.41	4.02	0.89	0.40	2.01	2.66	1.73	3.30	6.17	2.07	2.53	1.22	8.91	2.61	4.77	8.52	6.85	4.25	2.88	5.95	3.22	0.46	2.35	3.43	3.67	1.19	1.84	0.06
54	I5_SR2	SilentIntronRegion	0	4.81	4.09	2.32	2.26	0.00	3.04	0.53	2.91	3.32	7.12	1.58	0.97	3.52	7.69	3.03	2.94	11.93	8.30	2.77	2.63	2.45	0.67	1.71	3.06	2.48	5.96	0.43	3.73	1.59
55	I5_AR3	ActiveIntronRegion	0	9.06	3.68	4.02	0.00	1.68	6.76	1.61	2.95	4.94	7.59	3.67	3.59	1.55	9.73	3.67	7.50	13.49	9.36	4.75	2.97	3.26	1.24	2.89	7.38	2.94	3.23	2.72	4.85	2.60
56	I5_SR3	SilentIntronRegion	0	7.14	0.00	3.04	0.00	0.00	1.83	1.39	0.94	3.25	4.65	3.12	0.58	3.26	5.78	5.23	7.93	5.01	1.58	0.10	1.31	7.73	0.00	0.00	1.39	1.40	0.91	0.00	0.33	2.15
57	I5_AR4	ActiveIntronRegion	0	7.56	3.10	7.00	2.30	5.61	8.04	3.35	3.25	5.65	9.21	4.12	3.97	1.83	9.77	3.24	9.77	14.21	10.66	4.97	1.58	8.78	4.40	2.03	3.88	4.60	5.34	0.00	5.54	1.19
58	I5_SR4	SilentIntronRegion	0	7.26	4.25	4.12	5.12	2.07	6.55	1.06	5.93	7.55	10.23	2.60	4.77	2.44	10.08	7.36	8.53	21.68	10.68	5.69	2.59	7.34	3.98	2.22	7.98	4.19	5.02	1.13	5.35	1.95
59	I5_AR5	ActiveIntronRegion	0	5.23	6.70	2.94	1.39	0.00	4.49	1.68	2.72	3.50	6.76	1.10	3.58	2.70	6.08	5.20	4.54	13.17	7.99	3.30	2.64	4.07	2.47	0.56	7.86	4.31	6.63	0.19	4.95	1.21
60	I5_SR5	SilentIntronRegion	0	7.38	4.21	4.72	1.00	1.03	4.27	1.33	4.48	7.10	7.65	3.36	3.55	3.71	9.86	4.72	8.76	15.15	11.10	2.65	3.13	3.85	3.10	2.04	7.27	5.27	5.78	0.00	3.43	2.38
61	I5_AR6	ActiveIntronRegion	0	7.39	8.38	5.60	2.39	1.09	3.74	1.70	4.08	10.85	10.98	2.93	5.21	4.94	9.10	1.99	9.31	17.28	8.42	6.51	2.16	5.46	1.60	2.01	10.00	7.99	5.59	0.00	3.64	2.84
62	I5_SR6	SilentIntronRegion	0	10.31	7.53	5.72	1.53	3.66	7.50	1.72	2.17	10.86	8.64	1.53	2.83	3.04	10.89	7.28	8.00	21.55	6.66	2.73	3.71	5.80	2.89	1.74	13.11	6.27	9.75	1.17	5.40	4.87
63	E6_Aa	NovelBoundary	0	4.90	0.00	3.31	0.00	0.00	0.00	0.00	0.00	1.28	2.04	0.00	0.00	0.00	2.10	15.95	0.00	12.56	9.25	0.00	0.00	0.00	0.00	2.51	11.78	1.48	8.75	0.00	3.55	1.35
64	ER6a	ExonRegion	0	9.77	52.04	51.46	24.38	21.49	34.99	7.65	14.57	59.65	47.10	18.34	35.70	46.74	40.09	19.42	30.18	60.70	57.18	34.06	11.19	44.55	21.18	34.38	38.12	30.42	91.93	28.41	64.28	40.61
65	E6_Da	KnownBoundary	0	2.42	7.27	0.00	0.00	7.37	16.11	0.00	2.54	9.71	18.49	0.00	2.95	0.00	2.02	8.17	0.00	0.00	23.50	8.09	0.00	19.93	0.00	4.04	5.92	10.42	0.00	47.01	1.71	1.49
66	ER6b	ExonRegion	0	7.55	71.56	22.92	23.16	38.90	50.60	6.24	2.72	102.32	60.36	78.26	25.65	30.68	22.33	30.27	44.89	34.56	49.25	29.31	6.02	95.19	12.32	57.74	40.10	28.65	78.69	170.64	53.29	130.93
67	E6_Db	KnownBoundary	0	7.90	119.83	39.54	47.88	53.35	63.27	17.62	4.53	164.63	92.43	147.13	44.37	62.48	48.81	61.19	106.87	71.67	55.35	64.74	11.99	142.07	13.61	87.42	73.93	35.01	128.14	223.39	106.13	271.67
68	ER6c	ExonRegion	0	10.77	104.25	26.35	13.05	20.76	60.25	11.28	13.90	163.60	86.63	66.57	30.91	62.89	65.21	37.33	65.85	44.70	59.86	57.44	11.28	102.04	30.77	53.58	95.49	56.15	69.95	67.30	58.32	71.17