Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PKNOX1	Gene	0	40.14	42.00	41.51	56.87	42.99	43.72	43.12	59.87	34.48	44.54	34.07	40.14	28.51	43.96	36.62	51.16	40.88	42.55	44.60	50.01	53.79	44.75	60.30	47.54	39.13	81.07	55.83	38.50	44.90
2	291547	Transcript	0	29.77	28.12	41.45	60.22	42.79	32.93	32.70	45.30	26.85	29.30	30.05	31.79	25.60	31.68	36.05	38.68	37.07	41.90	31.47	35.81	40.65	33.63	44.98	37.22	29.60	62.38	49.03	32.95	36.67
3	432907	Transcript	0	1.71	0.00	0.77	3.34	0.00	2.61	0.00	0.58	0.35	0.66	0.00	0.03	0.51	0.54	0.00	1.00	1.44	1.18	1.01	0.00	0.00	0.51	0.89	1.35	0.00	0.29	0.01	0.00	0.00
4	480179	Transcript	0	0.95	0.02	0.33	1.40	0.10	0.95	2.07	0.36	0.41	0.74	0.95	0.03	0.38	0.26	1.93	0.24	1.53	0.69	2.21	0.40	1.32	0.70	0.27	0.64	0.49	0.54	0.00	0.56	0.33
5	474336	Transcript	0	2.73	3.86	0.42	1.91	0.68	1.24	1.28	22.80	1.45	3.20	1.21	2.48	0.58	3.39	3.33	0.99	2.73	3.16	1.42	1.78	2.63	1.64	1.21	3.46	1.44	3.90	1.32	2.03	0.70
6	ER1a	ExonRegion	0	0.00	0.68	0.00	0.00	4.57	0.00	1.34	0.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.30	0.75	0.00	0.00	0.00	0.00	0.00	1.63	0.00
7	ER1b	ExonRegion	0	17.03	12.32	21.38	85.09	59.20	18.86	35.49	19.41	10.56	19.22	19.81	25.30	18.69	16.78	18.02	40.94	18.45	25.22	13.51	28.17	26.71	22.42	38.65	5.29	17.57	49.43	25.27	53.91	33.23
8	E1a_E2a	KnownJunction	0	92.78	73.39	71.78	201.67	98.89	174.27	148.30	88.04	39.86	83.61	90.22	83.64	54.64	85.66	57.20	208.31	65.05	131.77	121.39	95.02	128.27	82.11	181.53	38.64	95.43	241.74	148.60	92.15	101.78
9	ER1c	ExonRegion	0	83.60	88.69	79.67	204.75	112.08	161.52	135.06	108.62	44.94	88.79	98.78	110.08	70.80	90.70	50.41	234.09	74.13	113.26	104.09	123.67	129.80	108.16	196.20	36.57	106.49	289.97	174.00	101.06	102.68
10	Ix_AR1	ActiveIntronRegion	0	5.25	2.34	0.50	0.00	0.87	5.25	2.17	4.84	1.27	3.11	0.71	3.57	1.04	4.30	6.53	4.36	10.56	6.36	4.20	2.63	8.78	1.83	0.86	1.67	1.11	4.32	1.86	3.21	3.00
11	Ix_SR2	SilentIntronRegion	0	2.22	2.88	0.32	0.00	0.46	2.77	0.47	2.31	2.30	2.78	0.00	1.15	0.27	1.46	3.19	1.41	4.12	2.93	2.59	0.45	5.85	0.51	0.34	2.26	1.22	3.69	1.91	1.88	2.47
12	Ix_AR2	ActiveIntronRegion	0	3.82	3.35	0.49	0.00	0.72	3.17	1.05	3.17	2.07	3.59	0.70	2.64	1.52	1.56	2.04	2.04	4.19	6.14	4.07	2.31	8.48	0.38	0.99	2.57	2.85	3.77	1.36	2.86	4.35
13	Ix_SR3	SilentIntronRegion	0	6.22	4.99	1.97	1.12	1.53	2.55	0.85	2.67	3.02	4.63	0.37	2.94	1.88	4.04	8.44	2.86	9.30	8.79	4.82	0.43	7.49	1.61	0.98	1.60	2.31	4.97	1.98	4.60	4.34
14	Ix_SR4	SilentIntronRegion	0	2.52	2.38	0.89	1.36	0.61	1.55	0.88	3.05	2.39	2.11	0.21	1.42	0.43	1.58	5.83	2.45	5.16	4.72	2.68	1.46	3.90	1.02	0.67	1.64	1.46	4.72	0.72	3.21	2.26
15	Ix_AR3	ActiveIntronRegion	0	1.99	4.71	1.60	6.51	0.00	1.81	2.40	6.50	1.86	2.19	1.48	1.15	3.30	2.29	3.34	4.44	8.45	8.06	5.92	1.02	4.89	2.44	1.02	3.63	1.87	15.16	1.59	3.24	6.89
16	Ix_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	4.61	0.00	0.00	9.95	6.39	0.00	0.00	0.00	0.00	2.15	0.00	1.54	1.83	0.00	1.34
17	ER2a	ExonRegion	0	63.56	46.17	56.17	112.29	64.06	88.38	62.45	63.63	30.48	50.22	59.73	64.73	46.40	54.88	38.31	105.51	53.92	54.15	71.14	91.18	73.52	73.10	99.35	29.59	63.06	182.81	135.79	42.85	58.40
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	92.84	64.98	33.23	43.59	37.75	116.98	114.60	99.23	42.76	106.55	75.07	73.56	64.11	82.47	57.45	150.44	61.34	86.37	107.13	148.24	111.53	102.52	128.17	46.15	99.52	200.79	82.65	91.28	83.25
20	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E3a_E4a	KnownJunction	0	83.05	79.60	58.20	61.69	136.47	63.69	101.79	48.57	25.95	100.66	165.64	96.59	40.86	86.94	50.83	67.32	95.51	73.98	105.20	141.75	85.84	52.21	165.92	56.71	72.74	166.89	158.73	38.37	74.28
22	E3a_E5a	NovelJunction	0	0.00	8.73	0.00	21.57	0.00	0.00	5.49	11.69	0.00	1.56	0.00	0.00	1.50	2.44	0.00	0.00	2.39	9.25	8.09	0.00	4.01	0.00	0.00	0.00	1.93	10.81	0.00	0.00	0.00
23	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4a	ExonRegion	1	112.36	84.13	85.54	162.88	149.85	124.18	143.53	84.18	41.87	111.44	109.33	73.59	49.38	105.15	43.96	114.00	63.70	72.48	95.28	187.55	139.41	85.01	128.23	79.24	88.34	115.87	179.95	52.10	69.22
25	E4a_E5a	KnownJunction	1	167.93	121.38	62.59	227.34	101.10	150.25	193.10	114.21	63.40	92.47	99.08	75.06	46.05	116.37	42.85	107.25	56.54	24.53	0.00	216.51	146.44	108.17	132.38	100.25	87.40	135.99	80.06	65.64	49.62
26	ER5a	ExonRegion	0	143.85	59.21	82.48	168.58	107.99	102.55	142.33	121.86	50.82	95.93	77.41	77.42	54.95	100.69	61.41	101.23	64.99	90.49	77.04	137.74	114.86	120.29	126.10	74.91	94.54	124.49	120.66	61.67	69.30
27	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E5a_E6a	KnownJunction	0	127.88	42.56	96.05	249.12	140.59	67.60	100.93	138.75	46.59	59.44	52.89	62.77	37.89	88.87	45.64	63.19	62.35	125.48	64.51	119.58	40.31	123.88	92.59	69.51	67.55	136.68	64.46	44.21	36.68
29	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	7.81	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER6a	ExonRegion	0	109.08	45.20	89.95	120.81	90.46	41.21	84.64	121.03	36.41	75.25	35.85	67.29	46.34	82.01	66.31	76.93	63.52	77.07	59.47	93.20	53.76	127.51	116.23	69.22	68.61	133.48	63.43	52.73	39.71
31	E6_Da	KnownBoundary	0	0.00	3.49	0.00	0.00	7.37	0.00	0.00	0.00	0.00	2.04	1.61	1.48	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E6a_E7a	KnownJunction	0	109.24	36.36	133.02	91.24	78.99	29.47	84.96	98.04	32.98	52.05	27.59	77.86	60.22	73.45	76.34	55.46	69.94	89.26	72.83	120.74	63.62	108.42	102.00	51.32	41.45	122.43	56.31	57.92	63.85
33	E6a_E8b	NovelJunction	0	2.89	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.58	0.00	0.00	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER6b	ExonRegion	0	0.95	0.02	0.33	1.40	0.10	0.95	2.07	0.36	0.41	0.74	0.95	0.03	0.38	0.26	1.93	0.24	1.53	0.69	2.21	0.40	1.32	0.70	0.27	0.64	0.49	0.54	0.00	0.56	0.33
35	E6_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.42	0.00	1.74	2.50	1.48	0.00	0.00	0.00	0.84	0.00	0.00	0.00	0.00	0.00	3.06	0.00	0.00	4.92	0.00	1.44	1.50	0.00	0.00	1.22
36	I6	Intron	0	0.00	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I6_SR1	SilentIntronRegion	0	0.00	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00
39	ER7a	ExonRegion	0	92.17	63.92	118.55	119.32	95.56	50.02	118.52	146.76	40.30	60.36	42.92	88.66	66.01	92.93	45.03	76.57	97.11	79.37	61.84	121.32	56.17	137.76	121.93	54.00	76.72	167.55	100.44	107.48	84.17
40	E7_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	1.04	4.62	0.00	0.00	0.00	0.00	5.02	0.00	1.63	0.00	0.00	3.91	0.00
41	E7a_E8b	KnownJunction	1	92.08	77.95	59.92	97.06	91.37	44.31	108.31	121.68	53.32	63.99	44.00	78.10	87.57	114.11	42.65	73.13	104.38	121.75	48.55	109.91	44.36	141.87	160.60	102.28	60.28	250.88	229.90	161.75	120.30
42	I7_AR1	ActiveIntronRegion	0	1.68	4.63	0.61	0.00	0.00	2.43	2.67	0.00	3.61	2.25	0.62	0.11	0.00	1.16	1.77	2.07	3.68	3.31	0.46	0.00	0.92	0.50	0.00	2.24	0.00	0.48	1.64	0.85	0.00
43	I7_SR2	SilentIntronRegion	0	2.66	1.79	0.44	0.00	0.00	1.83	1.05	1.44	1.29	0.76	0.00	1.26	0.00	1.01	1.97	0.65	2.30	1.25	0.30	0.36	3.43	0.24	0.00	0.56	0.19	1.20	0.24	1.07	0.18
44	E8_Aa	NovelBoundary	0	2.54	0.00	3.06	0.00	0.00	0.00	2.40	59.47	0.00	9.47	5.88	4.67	0.00	1.13	0.00	3.82	0.00	0.00	0.00	0.00	3.53	0.00	0.00	5.14	0.00	0.00	0.00	0.00	0.00
45	ER8a	ExonRegion	0	2.73	3.86	0.42	1.91	0.68	1.24	1.28	22.80	1.45	3.20	1.21	2.48	0.58	3.39	3.33	0.99	2.73	3.16	1.42	1.78	2.63	1.64	1.21	3.46	1.44	3.90	1.32	2.03	0.70
46	E8_Ab	KnownBoundary	0	0.00	0.00	0.00	10.78	0.00	0.00	2.35	14.18	0.00	7.83	4.75	0.00	0.00	3.83	0.00	3.82	0.00	19.26	0.00	3.23	5.29	0.00	0.00	8.61	0.00	1.67	0.00	0.00	0.00
47	ER8b	ExonRegion	0	143.06	90.33	76.48	144.08	78.73	108.71	189.98	234.58	97.68	143.22	90.34	101.42	88.56	123.43	94.38	125.65	110.50	114.80	95.40	162.58	150.77	162.68	168.78	102.75	134.93	311.50	131.91	133.56	108.29
48	E8_Da	NovelBoundary	0	0.00	0.00	0.97	0.00	0.00	0.00	0.00	3.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E8a_E9a	KnownJunction	0	100.16	84.64	112.12	193.04	71.33	105.70	112.54	168.41	43.58	42.74	59.66	61.20	57.00	91.75	41.46	68.24	70.50	69.99	89.02	126.36	113.79	141.14	75.45	89.24	59.56	119.64	54.82	57.69	59.19
50	I8_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	1.28	1.01	0.00	0.99	0.29	0.99	0.00	0.00	0.00	0.76	0.00	0.00	0.07	0.00	0.00	1.47	4.16	0.00	0.00	1.05	0.21	0.08	0.00	0.20	0.00
51	I8_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	2.73	3.35	0.00	1.11	0.64	0.00	4.58	0.00	0.00	0.44	0.00	0.00	0.00	3.66	0.00	1.01	1.80	0.00	0.00	0.00	3.80	0.00	0.00	1.26	0.00
52	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	1.67	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	4.04	1.45
53	ER9a	ExonRegion	0	92.67	57.85	118.58	170.47	117.68	83.66	95.76	113.91	40.61	62.21	79.52	67.72	49.43	93.26	42.62	68.20	87.75	55.08	55.49	106.26	96.66	112.80	81.82	79.20	61.81	134.67	93.12	92.76	70.04
54	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.00	0.00	0.00	3.14	2.01	0.00	0.00	0.00	4.89	0.00	0.00	0.00	0.00
55	E9a_E10a	KnownJunction	0	80.75	46.05	179.64	176.00	113.33	97.68	106.31	90.33	87.58	107.61	62.04	104.79	89.93	116.17	56.01	77.88	180.91	55.48	80.92	84.68	110.58	87.66	80.97	76.98	71.64	244.57	134.03	108.11	126.01
56	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER10a	ExonRegion	0	162.45	90.91	179.04	262.52	204.87	206.97	306.29	273.15	123.05	186.35	156.35	114.66	126.33	143.51	113.69	172.79	142.11	139.87	153.14	220.04	227.01	136.24	238.15	120.28	176.97	441.82	290.32	224.82	162.62
58	E10_Da	KnownBoundary	0	96.32	42.37	119.19	194.12	77.08	182.94	211.92	83.36	56.22	65.43	129.35	52.47	68.31	99.35	153.68	77.11	63.00	94.27	178.03	190.21	167.70	44.44	133.17	67.23	64.86	192.38	173.05	78.05	73.26
59	ER10b	ExonRegion	0	69.42	24.27	77.18	116.14	74.94	72.13	86.46	67.33	31.60	40.19	84.02	48.65	61.50	70.80	67.27	54.97	57.52	65.03	58.54	76.25	81.38	47.34	77.70	44.69	33.37	128.01	86.65	64.33	59.70
60	E10_Db	KnownBoundary	0	3.01	0.00	2.42	10.78	0.00	0.00	0.00	0.00	0.00	6.11	0.00	0.00	1.40	2.08	0.00	3.82	4.43	0.00	0.00	3.14	1.85	0.00	2.51	0.00	0.00	3.95	0.00	0.00	0.00
61	E10b_E11a	KnownJunction	0	56.98	13.38	80.08	145.16	88.57	49.53	72.61	61.41	20.92	28.64	56.97	39.49	44.87	40.28	59.80	51.64	60.55	80.91	32.37	68.39	53.55	54.11	62.89	29.61	44.10	88.57	90.30	58.91	41.83
62	ER10c	ExonRegion	0	3.41	0.00	1.54	6.68	0.00	2.16	0.00	1.16	0.69	1.32	0.00	0.06	1.01	1.08	0.00	2.00	2.88	2.36	2.01	0.00	0.00	1.02	1.79	2.71	0.00	0.58	0.02	0.00	0.00
63	E10_Dc	NovelBoundary	0	0.00	0.00	1.37	20.71	0.00	3.15	0.00	6.37	0.00	5.87	0.00	1.45	1.91	0.00	0.00	7.34	3.40	4.62	0.00	4.13	1.80	0.00	0.00	0.00	1.67	0.00	0.00	1.89	1.78
64	E10c_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	3.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	I10	Intron	0	1.65	2.12	1.65	3.15	1.61	1.36	0.88	2.22	1.72	2.38	0.91	1.35	0.35	1.64	0.51	4.59	3.27	5.35	2.45	0.91	1.88	0.99	1.98	1.18	1.57	2.41	1.41	3.40	1.32
66	I10_SR1	SilentIntronRegion	0	1.66	2.14	1.66	3.17	1.62	1.37	0.89	2.24	1.74	2.40	0.92	1.36	0.36	1.65	0.51	4.63	3.30	5.40	2.47	0.91	1.89	1.00	2.00	1.19	1.58	2.43	1.41	3.43	1.33
67	E11_Aa	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	3.30	8.30	0.00	1.55	0.00	1.61	0.00	1.27	1.11	0.00	3.75	2.25	0.00	0.00	0.00	2.01	0.00	1.92	0.00	0.00	6.57	0.00	0.00	3.14
68	ER11a	ExonRegion	0	37.71	55.91	40.71	54.62	39.65	44.70	33.57	59.20	36.20	45.97	30.91	39.63	24.33	46.73	38.90	53.94	44.26	50.51	54.16	52.54	58.66	41.56	68.13	54.08	37.99	67.78	58.01	37.64	43.36
69	E11_Ab	KnownBoundary	0	48.72	41.20	96.45	87.36	59.39	43.89	45.03	77.04	102.44	58.08	29.17	75.42	53.56	59.49	31.49	26.55	89.47	4.50	0.00	24.64	53.67	48.81	42.21	55.81	37.89	76.22	21.27	69.69	84.42
70	ER11b	ExonRegion	1	38.64	45.01	61.17	33.01	49.68	33.74	16.51	89.96	42.39	69.77	31.65	51.28	35.67	47.51	60.40	43.16	55.69	37.25	32.17	12.99	22.01	69.87	60.50	62.09	40.02	99.06	23.36	51.46	62.10
71	E11_Da	KnownBoundary	1	27.66	39.07	41.11	43.14	39.50	31.54	10.76	79.58	34.20	92.75	44.76	43.01	20.32	40.88	64.58	55.69	39.19	60.75	72.83	18.86	21.98	70.15	66.59	78.48	33.07	103.85	39.41	50.14	73.62
72	ER11c	ExonRegion	0	24.40	42.50	45.01	41.12	38.37	37.48	23.27	60.12	50.28	42.60	32.33	48.03	33.22	39.73	45.49	49.14	43.49	36.19	39.36	22.30	50.08	38.10	48.91	65.18	36.31	93.18	47.79	33.62	61.49
73	IG34_AR1	ActiveIntergenicRegion	0	0.64	7.51	1.01	2.47	1.09	2.96	1.19	0.79	6.41	2.97	0.20	1.65	0.96	1.21	4.96	1.71	3.34	2.15	6.04	4.42	3.08	0.31	0.97	4.37	2.23	0.75	2.04	1.12	2.58
74	IG34_AR2	ActiveIntergenicRegion	0	1.08	3.07	1.08	4.79	0.63	2.36	1.43	0.62	4.89	2.61	0.00	0.00	0.15	1.17	2.82	1.73	0.77	1.30	0.00	4.41	2.78	0.00	0.46	1.68	2.25	0.75	0.00	3.30	2.45