Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM83D	Gene	0	41.81	97.90	88.97	114.41	74.24	80.73	47.23	82.15	41.86	86.88	89.63	71.92	136.80	52.39	38.04	54.13	23.35	112.47	78.82	32.98	155.40	78.35	97.77	37.22	66.35	104.57	144.94	93.26	73.90
2	217429	Transcript	0	0.46	1.59	0.97	0.41	1.81	0.81	3.89	0.38	0.54	1.81	0.96	1.03	2.24	1.32	6.79	2.92	0.07	3.98	2.22	1.12	1.59	1.64	2.78	0.02	1.16	1.18	6.71	0.67	1.91
3	449225	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	424027	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	0	0.91	0.17	1.94	0.83	1.13	1.28	1.05	0.77	0.71	1.46	0.53	0.61	0.69	0.37	0.05	1.83	0.05	4.77	0.67	0.37	1.15	1.79	4.81	0.04	0.89	1.45	0.75	1.35	2.47
6	E1_Ab	KnownBoundary	0	0.00	0.00	4.58	0.00	0.00	3.91	2.92	0.00	2.83	1.92	1.33	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	2.36	0.00	3.83	1.85	2.09	0.00	4.26
7	E1_Ac	KnownBoundary	0	95.08	26.37	86.48	126.40	106.70	53.33	27.92	58.33	3.96	37.99	11.70	37.41	58.69	20.52	8.37	93.10	4.32	162.46	16.18	33.16	97.63	111.43	143.42	5.74	22.05	77.42	16.45	55.76	21.82
8	ER1b	ExonRegion	0	53.21	16.42	51.15	61.08	60.66	39.78	20.63	33.90	4.76	17.92	6.37	26.48	40.58	12.59	5.60	60.14	2.00	124.58	22.10	25.96	63.43	68.82	92.75	4.93	13.28	40.03	8.40	36.72	18.40
9	ER1c	ExonRegion	0	20.84	13.97	28.79	30.67	25.22	17.17	10.97	19.33	2.68	13.95	5.68	13.54	19.38	10.13	5.89	19.37	2.63	51.40	11.26	14.99	33.47	31.85	39.92	6.02	10.04	20.31	8.50	18.15	6.60
10	E1_Da	KnownBoundary	0	16.22	41.69	104.99	134.38	90.19	32.54	17.68	32.55	7.46	18.57	9.30	20.87	42.48	15.82	8.37	27.69	0.97	46.23	32.37	8.27	72.36	16.63	53.39	15.55	25.12	19.18	25.25	17.88	9.90
11	E1a_E1d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1d	ExonRegion	0	14.70	25.21	76.62	102.53	64.05	35.69	26.74	35.32	5.76	36.42	22.34	26.53	33.83	19.34	0.91	23.14	3.13	75.14	26.05	20.08	103.37	30.06	52.62	14.05	20.07	40.57	13.94	34.73	16.05
13	E1_Ad	KnownBoundary	0	29.67	17.64	59.47	79.16	95.05	37.60	35.36	63.05	4.66	51.97	26.92	37.41	37.42	24.75	7.57	27.31	7.11	51.76	40.46	31.59	117.64	54.99	68.01	11.13	27.01	55.36	11.93	40.08	13.90
14	ER1e	ExonRegion	0	34.61	27.44	59.78	45.49	43.08	43.79	36.46	56.15	9.73	47.47	36.95	46.60	59.51	27.96	18.53	38.78	11.59	89.70	45.72	28.07	117.51	60.34	71.16	8.86	28.00	43.77	28.60	55.54	19.24
15	E1_Db	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	1.30	1.62	0.00	0.00	0.00	2.70	4.62	0.00	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1b_E2a	KnownJunction	0	30.32	35.29	61.09	42.28	57.92	49.42	52.69	81.02	18.97	54.97	44.67	48.31	82.32	32.33	17.94	52.48	12.90	137.55	16.18	21.01	160.68	90.33	89.83	10.23	42.55	59.69	57.10	77.82	26.74
17	E2_Aa	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.39	0.00	3.15	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER2a	ExonRegion	0	43.67	68.67	135.36	91.97	100.91	139.02	80.92	86.48	22.69	105.28	140.26	103.70	117.58	70.01	13.80	84.48	24.46	139.32	87.85	49.29	248.84	90.53	141.10	35.42	87.86	102.38	183.27	120.27	59.53
19	E2_Da	NovelBoundary	0	10.97	0.00	2.64	0.00	6.78	5.72	2.29	2.54	3.84	14.86	0.00	6.23	0.00	4.17	8.37	3.14	2.14	28.25	8.09	0.00	11.83	1.99	0.00	0.00	0.00	0.00	0.00	4.40	0.00
20	E2a_E3a	KnownJunction	0	46.54	87.84	127.32	254.09	79.73	182.59	90.23	144.27	37.82	163.70	264.59	128.52	173.42	88.72	38.27	67.09	40.18	142.43	80.70	65.99	323.37	164.13	195.72	80.51	121.12	195.52	307.28	243.44	147.27
21	I2	Intron	0	4.65	10.23	1.89	6.66	2.48	5.29	3.34	1.75	5.69	4.50	2.76	3.20	1.32	2.81	3.05	3.00	2.51	8.68	8.97	1.29	6.81	0.40	0.68	1.05	2.24	1.56	0.53	3.89	1.43
22	I2_SR1	SilentIntronRegion	0	3.64	6.01	1.62	1.99	1.19	2.91	2.24	1.47	3.25	2.76	1.69	1.50	0.88	1.49	1.31	1.39	1.19	6.75	5.99	0.83	3.96	0.38	0.63	0.82	1.19	0.93	0.44	3.45	0.69
23	I2_AR1	ActiveIntronRegion	0	6.42	17.70	2.35	14.91	4.78	9.50	5.30	2.25	10.01	7.59	4.65	6.22	2.09	5.14	6.12	5.83	4.84	12.09	14.26	2.10	11.86	0.44	0.77	1.45	4.11	2.69	0.67	4.68	2.73
24	E3_Aa	NovelBoundary	0	7.96	4.85	1.15	18.12	5.75	3.34	5.26	2.54	17.88	1.88	4.84	3.49	0.00	4.43	0.00	10.63	4.37	14.64	24.28	0.00	4.53	2.09	0.00	0.00	4.96	0.00	0.00	2.16	1.88
25	ER3a	ExonRegion	0	78.83	130.95	147.66	149.24	92.06	179.71	90.52	130.07	56.13	172.80	202.20	130.55	208.99	103.50	20.74	102.30	36.52	177.29	117.56	67.43	301.30	155.58	202.05	69.68	153.00	201.63	280.83	180.36	116.78
26	E3_Da	NovelBoundary	0	2.42	0.00	4.19	0.00	0.00	5.22	0.00	4.78	4.75	7.55	6.26	0.00	1.59	4.48	18.34	5.66	1.08	13.87	16.18	3.80	11.91	0.00	0.00	0.00	1.78	0.00	6.26	6.11	0.00
27	E3a_E4a	KnownJunction	0	67.60	70.29	144.88	95.55	50.84	120.13	71.52	113.76	52.53	90.16	122.71	88.79	176.32	69.59	8.37	93.63	26.47	98.63	72.83	39.94	219.20	172.01	157.11	75.97	91.83	93.55	178.41	89.91	82.53
28	I3	Intron	0	6.46	7.00	2.65	6.89	2.95	4.48	2.12	3.25	4.46	4.32	2.31	3.02	2.51	2.97	3.56	3.28	1.83	10.03	7.71	2.15	7.33	1.09	1.05	1.59	4.44	2.74	2.25	3.86	0.98
29	I3_SR1	SilentIntronRegion	0	6.47	7.00	2.66	6.89	2.95	4.49	2.12	3.25	4.46	4.33	2.31	3.02	2.52	2.97	3.56	3.28	1.84	10.04	7.71	2.15	7.33	1.09	1.05	1.59	4.44	2.74	2.25	3.86	0.99
30	E4_Aa	NovelBoundary	0	14.63	12.31	7.55	21.57	0.00	1.80	2.92	7.61	7.00	3.64	0.00	7.08	0.00	5.72	7.37	17.37	2.07	18.49	32.37	0.00	7.50	7.39	2.36	6.10	3.30	4.12	0.00	2.29	1.55
31	ER4a	ExonRegion	0	48.13	133.36	102.97	147.91	89.67	91.70	53.96	102.97	58.79	106.72	107.96	86.75	180.67	63.39	55.48	61.18	30.53	130.06	101.32	36.11	179.80	90.78	108.87	47.80	79.73	131.37	185.46	113.18	99.20
32	ER4b	ExonRegion	0	0.00	3.01	0.00	0.00	2.49	0.34	6.72	0.00	0.37	2.17	1.39	1.44	3.79	2.27	13.53	4.01	0.08	3.18	3.77	1.87	2.02	1.50	0.75	0.00	1.43	0.92	12.67	0.00	1.34
33	IG26_AR1	ActiveIntergenicRegion	0	0.00	4.82	0.00	0.00	3.54	0.00	2.55	3.56	0.70	3.59	2.22	0.44	0.00	0.00	3.11	0.00	0.00	2.12	2.92	0.06	2.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00