Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	E2F1	Gene	0	63.65	52.27	67.09	77.97	119.36	55.80	58.01	63.18	49.04	69.40	52.91	140.90	98.17	33.72	33.27	23.99	34.57	83.74	112.89	68.96	51.74	63.08	127.28	35.84	32.81	82.87	47.00	74.33	38.70
2	343380	Transcript	0	84.92	85.75	136.54	179.05	175.34	71.30	93.94	100.10	75.03	114.30	99.89	314.42	178.32	63.94	29.16	36.14	87.57	102.03	206.26	100.04	89.66	111.93	240.84	55.74	46.91	153.83	194.77	157.82	78.12
3	402461	Transcript	0	0.00	0.00	0.56	0.00	0.00	0.00	1.01	0.92	0.00	2.42	1.40	3.42	1.95	1.51	0.00	0.00	0.00	1.36	0.00	1.41	0.00	0.00	3.04	2.15	0.00	3.96	5.26	0.00	0.00
4	IG38_SR10	SilentIntergenicRegion	0	0.00	4.69	0.82	6.96	7.12	7.34	5.89	1.79	1.64	11.22	4.05	1.20	2.51	6.16	0.00	3.28	0.73	8.58	7.76	4.98	9.71	3.52	3.51	8.36	4.86	3.83	4.45	11.08	3.91
5	IG38_SR9	SilentIntergenicRegion	0	0.54	13.37	14.35	1.81	28.36	11.45	5.09	2.32	6.51	12.39	5.71	3.12	4.26	7.43	22.96	3.58	9.80	11.35	24.20	19.99	15.48	3.64	14.15	22.27	11.55	15.87	10.17	30.04	23.14
6	IG38_SR8	SilentIntergenicRegion	0	0.66	3.28	8.89	21.94	48.28	7.83	7.29	2.27	1.99	3.78	1.65	4.95	5.10	4.81	11.20	18.69	2.62	11.76	12.18	11.89	5.71	1.53	5.15	10.76	4.84	4.96	4.37	16.05	5.47
7	IG38_AR12	ActiveIntergenicRegion	0	6.78	11.64	17.97	24.17	57.79	14.10	20.84	23.02	29.21	14.99	8.07	10.67	8.43	15.39	40.86	32.21	16.26	21.36	18.29	28.24	18.81	18.27	20.77	39.89	16.84	15.78	15.54	27.84	32.64
8	IG38_SR5	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	4.98	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	3.33	0.00
9	IG38_AR4	ActiveIntergenicRegion	0	0.00	2.22	1.65	0.00	3.37	2.03	1.19	1.63	3.81	2.42	0.82	3.40	1.53	1.25	3.07	4.61	4.12	1.90	0.63	2.44	0.42	2.13	2.49	11.87	1.55	5.26	3.97	2.41	7.19
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1b	ExonRegion	0	15.56	8.48	5.90	16.97	39.58	24.57	15.00	7.50	6.58	11.86	6.79	19.03	14.88	6.95	11.79	6.89	4.09	24.63	39.01	16.51	13.46	12.84	23.44	4.39	4.88	28.86	3.28	15.49	5.30
12	E1_Da	NovelBoundary	0	5.13	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1a_E2a	KnownJunction	0	69.90	17.45	30.05	67.30	75.45	35.45	56.99	34.49	32.86	43.10	48.18	80.54	68.27	33.12	28.10	18.21	27.57	75.00	48.55	56.65	18.57	57.66	92.54	30.09	20.34	37.08	22.86	49.20	18.72
14	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.80	3.73	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
15	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
16	I1	Intron	0	5.03	5.32	2.01	1.38	3.70	3.94	1.74	1.04	2.66	3.35	1.70	3.52	1.62	1.36	2.47	1.22	2.93	6.31	8.45	1.31	3.37	0.48	1.64	1.53	1.47	1.63	1.63	2.16	1.79
17	I1_SR1	SilentIntronRegion	0	5.04	5.33	2.02	1.39	3.71	3.95	1.74	1.04	2.66	3.35	1.70	3.52	1.62	1.36	2.48	1.22	2.93	6.32	8.47	1.31	3.38	0.48	1.64	1.54	1.47	1.64	1.64	2.16	1.79
18	E2_Aa	NovelBoundary	0	10.91	3.88	3.69	0.00	0.00	3.72	0.00	2.09	2.92	9.55	0.00	12.53	2.93	0.91	0.00	0.00	7.20	0.00	0.00	0.00	0.00	0.00	6.94	8.25	0.00	8.41	0.00	5.57	4.85
19	ER2a	ExonRegion	0	129.20	50.18	60.04	134.44	144.25	63.51	79.15	78.20	49.14	75.84	62.50	166.60	104.72	57.25	53.79	35.15	44.46	115.16	105.24	117.99	66.66	96.42	152.09	32.62	45.14	84.90	38.74	100.29	40.22
20	E2_Da	NovelBoundary	0	0.00	0.00	2.47	0.00	0.00	3.84	4.58	0.00	3.08	1.52	3.16	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.78	0.00	9.28	2.02	0.00	4.45	0.00
21	E2a_E3a	KnownJunction	0	210.58	72.03	87.92	190.02	413.52	141.96	138.12	116.05	81.00	116.68	68.36	254.24	150.97	78.63	116.40	50.80	49.39	167.47	153.76	219.81	113.67	159.66	197.10	61.37	55.69	131.53	49.00	139.29	74.08
22	I2	Intron	0	2.18	0.00	0.24	0.00	0.00	0.20	0.88	2.14	0.98	2.73	0.69	2.96	0.19	0.13	0.80	0.00	0.65	4.48	1.39	0.80	0.21	0.00	0.26	0.00	1.04	1.37	0.00	1.18	0.20
23	I2_AR1	ActiveIntronRegion	0	2.22	0.00	0.25	0.00	0.00	0.20	0.89	2.18	1.00	2.77	0.70	3.01	0.19	0.13	0.81	0.00	0.66	4.51	1.42	0.81	0.21	0.00	0.27	0.00	1.06	1.39	0.00	1.20	0.20
24	E3_Aa	NovelBoundary	0	5.37	0.00	0.00	0.00	0.00	5.52	0.00	0.00	1.55	1.64	1.33	5.84	0.00	1.20	8.17	0.00	5.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	3.53
25	ER3a	ExonRegion	0	206.09	104.68	128.68	147.35	247.31	163.83	146.26	160.85	94.09	171.35	142.21	369.40	239.30	91.94	79.40	70.57	85.43	232.28	248.61	202.06	134.89	181.06	312.94	83.51	85.65	190.95	106.04	199.84	90.60
26	E3_Da	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	1.80	0.00	0.00	2.95	0.00	0.00	1.54	0.00	1.86	0.00	0.00	1.35	4.62	0.00	0.00	3.89	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00
27	E3a_E4a	KnownJunction	0	119.86	108.20	130.58	208.14	76.19	161.11	149.33	108.34	89.10	151.47	84.18	377.19	229.34	75.97	53.22	71.60	93.39	171.33	234.46	134.97	182.66	141.28	371.44	69.80	49.17	230.58	95.02	193.03	64.28
28	I3	Intron	0	3.02	1.21	0.79	4.71	0.00	2.45	1.33	0.17	0.74	2.44	1.01	3.76	0.97	0.72	0.87	0.47	1.12	2.56	3.00	1.55	1.21	0.17	0.51	0.81	0.54	1.33	1.03	0.77	0.76
29	I3_SR1	SilentIntronRegion	0	3.03	1.21	0.79	4.73	0.00	2.46	1.33	0.17	0.74	2.45	1.01	3.77	0.98	0.73	0.87	0.47	1.13	2.57	3.01	1.56	1.21	0.17	0.51	0.81	0.54	1.33	1.04	0.77	0.76
30	E4_Aa	NovelBoundary	0	2.48	3.78	0.00	0.00	7.37	9.44	0.00	0.00	1.55	3.28	0.00	6.08	0.00	0.00	0.00	0.00	1.31	4.75	0.00	0.00	3.77	0.00	2.02	0.00	0.00	1.59	0.00	1.89	0.00
31	ER4a	ExonRegion	0	147.87	157.91	207.24	246.86	303.74	143.24	150.79	180.51	108.02	149.81	113.88	412.92	248.94	85.41	79.69	68.69	97.88	226.38	288.06	195.37	147.91	165.43	347.01	92.53	73.63	187.23	132.62	178.64	97.93
32	E4a_E5a	KnownJunction	0	120.80	129.14	197.55	259.26	257.02	102.56	123.58	133.67	117.79	183.35	147.32	448.52	247.88	94.30	38.67	51.48	128.48	143.71	290.65	125.87	128.47	170.84	329.23	84.40	69.97	226.54	304.10	241.19	120.96
33	E4_Db	NovelBoundary	0	2.36	3.97	2.42	0.00	0.00	1.69	0.00	0.00	3.62	0.00	0.00	1.33	0.00	1.24	0.00	0.00	0.90	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00	0.00	4.82	0.00	1.55
34	E4b_E5a	NovelJunction	0	7.96	0.00	7.85	10.78	20.04	5.14	12.87	12.09	8.89	3.44	1.61	15.12	14.71	6.96	0.00	0.00	9.41	0.00	0.00	11.66	19.45	4.62	13.40	3.05	5.64	0.00	0.00	17.61	0.00
35	E4b_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	1.61	3.13	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.46	0.00	0.00	1.63	5.02	0.00	0.00
36	ER4b	ExonRegion	0	0.00	0.00	1.12	0.00	0.00	0.00	2.02	1.84	0.00	2.89	1.19	3.71	3.90	1.81	0.00	0.00	0.00	2.73	0.00	2.81	0.00	0.00	3.62	4.30	0.00	6.29	5.49	0.00	0.00
37	I4	Intron	0	9.91	6.59	1.50	5.35	5.83	6.56	3.31	4.67	6.60	4.95	1.95	4.78	3.28	2.76	4.65	3.70	4.90	11.73	15.24	3.29	1.70	0.27	2.43	4.81	3.20	4.22	1.64	1.94	0.70
38	I4_SR1	SilentIntronRegion	0	10.15	6.73	1.53	5.47	5.97	6.72	3.39	4.77	6.74	5.07	2.00	4.84	3.36	2.83	4.76	3.77	5.00	11.95	15.61	3.37	1.74	0.28	2.48	4.89	3.27	4.31	1.68	1.99	0.72
39	E5_Aa	NovelBoundary	0	2.48	0.00	1.54	0.00	6.34	1.57	2.75	0.00	4.32	0.00	0.00	0.00	1.46	2.79	0.00	0.00	5.76	0.00	0.00	0.00	5.74	0.00	2.12	5.62	1.74	0.00	0.00	0.00	0.00
40	E5_Ab	NovelBoundary	0	8.20	0.00	0.00	0.00	6.93	1.96	0.00	0.00	7.25	0.00	1.55	2.65	0.00	0.84	0.00	3.14	3.53	0.00	0.00	0.00	1.80	0.00	2.12	2.51	3.22	3.26	0.00	0.00	0.00
41	I4_AR1	ActiveIntronRegion	0	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.31	0.94	0.24	0.00	2.47	0.00	0.00	0.00	0.84	1.00	2.73	0.00	0.00	0.00	0.00	0.00	1.79	0.00	0.52	0.00	0.00	0.00
42	ER5a	ExonRegion	0	133.97	128.11	212.07	277.88	269.00	110.66	158.24	166.62	107.30	159.54	152.33	494.75	287.08	97.51	44.80	56.94	134.23	162.39	328.12	174.26	140.50	164.95	393.30	82.82	70.75	234.96	280.22	232.28	113.41
43	ER5b	ExonRegion	0	228.04	225.44	202.87	221.90	343.99	204.21	237.00	282.99	215.16	335.52	269.45	527.54	382.02	135.66	130.20	93.75	157.50	304.17	500.64	243.68	215.61	221.85	535.39	156.42	161.43	390.77	217.17	296.93	169.08
44	E5_Da	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	5.84	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	13.87	0.00	3.23	1.64	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
45	E5a_E6a	KnownJunction	0	376.62	291.92	215.19	249.77	493.69	308.44	182.92	411.07	302.21	283.85	233.46	504.09	422.80	173.66	164.04	95.39	146.11	311.31	566.47	412.34	235.21	350.14	466.25	252.90	239.93	358.76	184.63	228.03	198.48
46	E6_Aa	NovelBoundary	0	20.17	9.70	1.07	0.00	0.00	1.42	0.00	5.08	3.20	3.91	1.42	1.39	1.82	2.04	0.00	0.00	3.58	4.62	8.09	0.00	2.05	4.72	0.00	0.00	0.00	0.00	14.31	0.00	0.00
47	ER6a	ExonRegion	0	178.95	187.21	213.26	230.12	371.85	160.29	170.63	206.80	195.09	209.42	155.59	412.88	328.37	104.06	101.43	62.53	106.58	239.94	377.25	199.28	153.81	207.22	370.22	131.52	106.94	245.11	140.49	205.98	128.68
48	E6_Da	NovelBoundary	0	49.84	4.75	6.45	10.78	40.38	8.90	17.85	18.07	16.47	13.74	1.61	7.53	11.56	5.32	8.17	0.00	8.15	18.49	32.37	18.11	12.51	16.58	15.17	19.26	11.63	4.12	9.39	8.49	1.68
49	E6a_E7a	KnownJunction	0	84.17	92.88	154.07	169.97	286.64	55.02	129.08	74.85	96.44	145.20	84.31	258.79	224.76	51.03	60.79	43.68	45.20	135.62	226.59	138.85	69.67	58.68	252.40	58.74	47.92	186.16	76.83	151.69	63.88
50	E7_Aa	NovelBoundary	0	39.28	9.02	9.52	34.94	32.72	7.02	15.79	15.97	13.89	14.98	1.46	8.95	9.62	4.52	16.54	13.69	12.72	23.89	48.55	4.13	7.86	13.18	11.92	14.24	3.56	1.76	7.36	26.55	3.50
51	ER7a	ExonRegion	0	5.52	6.02	22.12	22.06	35.54	5.36	8.74	4.73	7.67	12.41	7.37	24.62	16.83	3.24	4.95	2.56	3.86	11.57	12.92	6.39	5.06	5.27	22.29	3.83	2.70	13.83	9.58	14.75	6.07