Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MKKS	Gene	0	107.70	90.31	33.77	118.81	164.15	89.06	142.15	144.74	57.69	77.89	72.54	50.79	80.24	67.30	74.16	82.94	89.82	55.68	156.43	125.47	84.54	116.82	72.37	104.26	73.59	59.19	82.69	105.73	92.89
2	347364	Transcript	0	118.51	68.82	36.68	215.04	223.30	126.29	556.25	180.90	145.60	119.68	42.82	100.11	192.44	61.34	158.85	132.45	87.35	148.44	161.91	99.46	193.39	144.52	218.58	51.67	90.49	146.65	103.00	266.38	412.54
3	399054	Transcript	0	0.00	0.25	0.00	0.00	0.00	1.17	0.00	0.20	0.24	0.31	0.25	0.13	0.00	0.00	0.00	0.26	0.16	0.00	0.68	0.00	0.76	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.14
4	419178	Transcript	0	0.54	1.22	0.00	0.89	1.23	0.52	0.51	0.00	0.46	1.24	0.60	0.47	0.00	0.40	0.00	2.98	0.77	0.00	3.23	0.93	1.60	0.00	0.00	1.34	0.19	0.00	1.16	0.41	0.09
5	IG41_AR1	ActiveIntergenicRegion	0	0.48	1.74	2.02	1.61	1.10	3.71	1.35	1.24	0.63	1.45	1.27	1.30	0.43	0.20	1.23	2.21	0.86	1.72	1.44	0.62	2.37	1.11	3.62	1.43	1.23	0.35	0.35	2.93	2.75
6	ER1a	ExonRegion	0	76.05	72.50	21.34	254.29	202.99	94.66	429.02	126.71	71.49	65.03	28.20	72.16	149.67	33.99	71.74	154.59	60.44	124.26	137.70	67.51	128.42	124.17	196.14	26.60	36.90	64.57	57.26	144.15	218.62
7	E1_Da	NovelBoundary	0	2.89	0.00	0.00	0.00	6.63	0.00	2.35	0.00	0.00	0.00	1.61	1.87	1.62	0.00	0.00	3.21	2.41	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	4.09	4.23
8	E1a_E3a	KnownJunction	0	160.97	65.15	52.02	175.79	243.60	157.92	683.49	235.09	219.71	174.32	57.45	128.07	235.20	88.69	245.96	110.31	114.26	172.61	186.13	131.41	258.35	164.86	241.03	76.74	144.08	228.73	148.74	388.61	606.46
9	E2_Aa	NovelBoundary	0	0.00	0.00	2.52	0.00	0.00	6.56	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	3.06	0.00	0.00	0.00	0.00	3.81	0.00	0.00	0.00	0.00	2.10	0.00	0.00	0.00
10	ER2a	ExonRegion	0	0.00	0.49	0.00	0.00	0.00	2.35	0.00	0.39	0.48	0.62	0.51	0.27	0.00	0.00	0.00	0.53	0.32	0.00	1.36	0.00	1.52	0.00	0.00	0.46	0.00	0.00	0.00	0.00	0.29
11	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	1.48	0.00	0.00	0.00	0.91	0.00	0.00	1.28	0.00	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I2_AR5	ActiveIntronRegion	0	0.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.73	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00
14	I2_SR5	SilentIntronRegion	0	0.72	0.00	0.00	0.80	0.55	0.31	0.62	0.41	1.76	1.10	0.73	0.33	0.39	0.59	0.00	0.55	0.40	1.05	1.49	1.06	2.80	0.00	0.00	0.33	0.00	0.00	0.00	1.28	0.29
15	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	3.82	7.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER3a	ExonRegion	0	340.61	182.08	41.44	120.83	167.88	223.91	677.99	485.73	214.63	253.44	199.92	157.63	290.75	153.61	205.82	203.82	136.52	189.99	436.30	238.04	292.35	382.78	320.79	209.37	235.33	250.67	225.11	321.74	505.37
17	E3_Da	NovelBoundary	0	8.26	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	3.95	3.92	0.00	0.00	0.00	0.00	3.60	0.00	0.00	0.00	0.00	2.05	0.00	0.00	3.05	3.41	2.06	0.00	0.00	0.00
18	E3a_E4a	KnownJunction	0	346.95	261.57	100.51	174.71	546.01	145.41	407.60	331.54	180.71	204.76	248.96	151.83	236.67	173.51	200.91	143.66	148.02	136.91	493.19	281.26	174.12	299.87	273.09	236.51	198.37	115.65	397.88	266.85	309.53
19	E3a_E5a	NovelJunction	0	8.08	4.85	0.00	32.35	0.00	7.29	2.17	14.08	3.29	5.59	1.20	6.42	1.40	3.32	0.00	0.00	2.30	0.00	16.18	4.13	6.58	1.94	2.22	0.00	1.67	2.19	6.86	6.25	0.00
20	I3	Intron	0	2.41	1.37	0.43	1.12	0.63	3.43	1.41	0.63	1.28	3.09	1.00	0.75	0.32	1.47	1.58	2.96	3.36	4.10	5.10	1.54	3.58	0.21	0.15	1.72	0.67	0.20	1.07	1.42	0.97
21	I3_SR1	SilentIntronRegion	0	2.11	0.59	0.08	0.99	0.00	4.16	0.87	0.51	0.74	1.58	0.71	0.48	0.18	1.04	1.98	2.78	2.12	4.56	4.66	0.78	2.36	0.08	0.00	0.77	0.33	0.00	0.40	0.89	1.07
22	I3_AR1	ActiveIntronRegion	0	2.67	1.06	0.00	1.37	0.94	3.94	1.02	0.35	1.22	3.11	1.36	0.95	1.00	1.29	0.00	0.95	3.45	2.68	3.68	1.48	4.63	0.35	0.35	1.33	0.54	0.00	2.19	0.97	0.38
23	I3_SR2	SilentIntronRegion	0	2.75	1.85	0.42	0.97	0.33	2.69	1.23	0.75	0.64	3.09	0.40	0.52	0.31	0.89	0.69	1.49	2.84	4.06	3.15	1.49	3.65	0.24	0.49	2.17	1.01	0.19	0.75	1.77	1.32
24	I3_AR2	ActiveIntronRegion	0	2.88	3.80	0.86	1.27	1.52	3.74	2.42	1.17	2.90	8.85	1.30	1.02	0.55	2.87	3.71	4.58	5.19	6.24	7.77	1.26	5.70	0.56	0.00	3.09	1.69	0.53	2.28	1.84	0.73
25	I3_AR3	ActiveIntronRegion	0	4.11	2.59	0.19	7.42	0.00	6.85	1.79	2.52	1.22	4.39	2.56	1.17	0.24	3.81	1.81	2.00	5.50	4.23	5.29	3.44	2.05	0.00	0.00	2.85	0.00	0.00	0.00	1.97	0.74
26	I3_SR3	SilentIntronRegion	0	1.63	1.36	0.69	1.22	0.69	2.89	1.42	0.52	1.70	3.04	1.27	1.23	0.36	2.11	1.55	4.03	5.10	3.59	6.66	2.93	3.99	0.13	0.00	1.98	0.81	0.56	0.91	1.84	0.26
27	I3_AR4	ActiveIntronRegion	0	3.41	0.51	1.06	0.00	2.33	2.40	2.88	0.29	2.21	2.28	1.85	0.59	0.00	1.15	1.47	4.90	2.61	2.75	6.09	1.07	4.08	0.29	0.29	2.05	0.00	0.00	2.62	1.29	2.23
28	E4_Aa	NovelBoundary	0	2.42	9.21	0.00	0.00	5.45	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	1.15	9.25	8.09	8.27	7.34	0.00	2.51	5.32	0.00	0.00	0.00	0.00	2.91
29	ER4a	ExonRegion	0	175.67	192.25	50.86	198.40	298.99	169.33	215.40	132.02	86.65	129.48	122.68	71.80	109.04	107.66	119.22	136.51	106.23	100.23	346.68	255.03	164.27	136.70	106.54	146.15	98.43	42.45	116.70	96.45	99.26
30	E4_Ab	KnownBoundary	1	114.08	88.32	23.64	87.36	195.71	68.41	80.16	102.82	14.50	94.75	55.87	71.11	52.93	59.14	81.12	64.95	118.60	47.52	153.76	148.28	71.64	41.91	61.37	44.56	75.88	49.87	54.17	131.51	69.66
31	ER4b	ExonRegion	0	111.86	80.43	43.02	154.39	223.50	98.81	107.15	147.61	41.89	73.36	81.52	47.15	64.05	77.77	54.11	83.15	116.11	50.15	135.16	151.66	78.00	120.85	54.17	120.61	78.79	57.65	104.70	125.41	57.16
32	E4_Da	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	1.57	2.52	14.13	1.19	9.95	1.61	0.00	0.00	1.13	0.00	3.37	11.57	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	2.09	10.20	1.29
33	E4a_E5a	KnownJunction	0	48.31	44.60	34.11	148.61	183.62	68.18	117.75	153.38	65.02	48.73	59.66	30.87	71.24	58.16	79.33	81.47	113.96	41.61	72.83	101.47	40.35	140.36	38.27	116.88	61.37	51.45	73.25	122.39	74.71
34	I4	Intron	0	1.09	4.26	0.35	1.65	2.03	4.78	2.83	0.85	2.33	3.36	1.23	1.39	0.67	0.99	1.97	3.32	4.88	2.05	4.05	2.29	5.03	0.33	0.17	2.28	0.56	0.25	0.59	0.98	1.26
35	I4_SR1	SilentIntronRegion	0	1.16	3.85	0.39	2.17	1.32	4.99	2.79	1.05	1.80	4.04	1.29	1.35	0.78	1.07	1.81	2.52	5.52	2.55	3.80	2.23	4.53	0.36	0.12	2.13	0.67	0.21	0.56	0.96	1.40
36	I4_AR1	ActiveIntronRegion	0	0.89	4.99	0.35	0.75	3.05	4.62	3.37	0.38	3.15	1.51	1.59	1.29	0.40	0.97	1.20	4.60	3.48	1.20	5.57	3.15	5.46	0.38	0.19	3.06	0.45	0.33	0.00	0.95	1.25
37	I4_SR2	SilentIntronRegion	0	1.05	5.50	0.00	0.00	4.77	3.69	1.97	0.45	4.24	2.82	0.00	1.96	0.47	0.44	4.93	6.15	3.64	0.47	2.34	0.67	7.60	0.00	0.44	1.57	0.00	0.38	2.23	1.19	0.33
38	E5_Aa	NovelBoundary	0	2.95	4.85	0.00	0.00	0.00	0.00	2.80	2.34	2.89	0.00	0.00	3.25	0.00	1.04	0.00	0.00	7.59	0.00	0.00	3.72	1.60	0.00	0.00	5.38	0.00	1.97	0.00	1.84	3.47
39	ER5a	ExonRegion	1	104.54	103.92	50.33	150.53	194.99	77.79	78.61	187.33	68.53	85.26	86.88	50.59	93.20	86.75	82.32	95.87	127.92	47.96	152.85	129.45	62.30	145.98	57.25	153.31	95.37	67.96	95.10	125.50	94.43
40	E5a_E6a	KnownJunction	0	95.97	66.31	52.97	160.47	227.10	57.63	67.97	162.88	63.19	48.01	66.75	46.63	72.22	78.55	59.00	68.62	121.26	55.74	96.88	71.53	59.97	108.03	57.28	105.93	40.54	78.23	66.40	74.50	65.20
41	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.65	2.23	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.00	4.62	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER6a	ExonRegion	1	114.74	109.08	76.83	161.41	235.84	76.45	78.94	212.74	72.33	80.55	83.34	55.64	91.62	85.12	81.03	79.25	143.30	37.84	138.83	111.03	59.39	160.30	51.19	152.31	87.40	63.71	95.07	140.95	92.40
43	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.00	1.89	0.00	4.84	1.42	1.31	1.15	0.00	3.52	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E6a_E7a	KnownJunction	1	124.81	138.15	43.40	222.81	282.07	106.78	74.72	256.39	87.06	105.46	116.16	56.63	104.77	95.58	92.09	112.45	144.87	33.13	137.12	128.35	61.41	157.18	53.88	207.20	128.13	75.44	90.00	128.64	87.98
45	I6	Intron	0	0.66	5.02	0.71	3.32	2.83	2.92	0.93	0.57	2.32	2.51	1.56	0.83	0.75	0.65	3.17	1.92	2.94	1.05	1.36	0.96	1.27	0.21	0.14	1.75	0.61	0.24	0.35	1.57	0.59
46	I6_AR1	ActiveIntronRegion	0	0.83	3.40	0.22	1.86	0.63	1.42	1.04	0.24	3.77	1.68	0.77	0.16	0.00	0.17	0.71	1.93	1.16	0.50	2.07	0.71	1.48	0.23	0.00	0.84	0.37	0.00	1.19	0.42	0.52
47	I6_SR2	SilentIntronRegion	0	0.71	5.39	1.11	3.57	5.27	4.34	0.33	0.76	1.91	3.36	1.78	1.33	1.18	1.05	4.67	1.85	5.08	0.99	1.06	0.69	0.24	0.30	0.30	2.67	1.07	0.52	0.00	2.84	0.83
48	E7_Aa	NovelBoundary	0	2.83	13.09	0.00	0.00	6.34	27.59	2.92	4.58	3.90	7.71	6.45	1.48	1.56	4.81	8.37	3.75	3.40	4.62	8.09	0.00	2.05	0.00	2.51	5.80	0.00	0.00	0.00	0.00	0.00
49	ER7a	ExonRegion	1	80.22	92.19	28.67	81.92	107.77	59.15	55.75	152.12	55.45	61.39	49.61	49.90	70.97	56.29	106.42	65.83	98.91	29.96	117.61	89.60	45.09	98.16	39.75	111.15	60.13	58.58	49.57	87.12	57.51
50	E7_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	9.71	0.00	0.00	0.00	1.22	7.57	11.02	2.57	0.00	0.00	6.45	1.52	0.00	0.00	5.62	0.00	0.00	0.00	0.00	1.68
51	ER7b	ExonRegion	0	0.54	1.22	0.00	0.89	1.23	0.52	0.51	0.00	0.46	1.24	0.60	0.47	0.00	0.40	0.00	2.98	0.77	0.00	3.23	0.93	1.60	0.00	0.00	1.34	0.19	0.00	1.16	0.41	0.09
52	IG40_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.47	0.00	0.00	3.65	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00