Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ROBLD3	Gene	0	351.75	179.72	137.65	303.09	366.52	107.42	272.09	237.29	191.96	117.06	113.58	137.90	360.65	116.04	559.52	174.71	123.46	129.64	120.10	202.51	140.38	446.47	152.64	138.63	227.41	344.81	208.19	367.10	304.97
2	368305	Transcript	0	46.05	58.49	116.33	281.72	102.79	26.43	137.52	88.52	30.62	41.68	41.95	37.92	83.29	12.62	156.48	65.03	25.99	62.70	43.89	33.45	43.13	79.32	68.05	17.41	97.64	199.12	100.00	136.46	117.73
3	368304	Transcript	0	5.37	8.82	5.18	0.00	0.00	3.34	12.99	6.27	7.55	1.48	0.00	10.42	12.26	2.22	30.89	2.83	4.25	0.00	8.09	0.00	3.37	2.48	2.51	8.91	0.00	13.48	14.71	12.40	7.20
4	489664	Transcript	0	13.76	8.70	13.17	4.22	7.17	5.94	6.51	4.98	7.07	6.42	4.09	5.23	5.52	9.27	22.69	15.41	22.59	7.17	4.70	11.69	6.34	8.80	0.91	12.21	7.45	8.91	2.40	3.83	5.82
5	368302	Transcript	0	9.93	7.43	5.70	10.39	11.34	3.40	5.20	9.04	4.79	2.81	2.08	2.64	6.44	5.06	28.67	3.36	3.57	6.03	3.87	8.32	2.83	9.63	2.24	6.71	4.87	4.49	3.35	5.17	4.20
6	487106	Transcript	0	28.69	12.61	10.98	2.25	22.63	17.07	18.85	15.21	6.79	6.11	4.47	1.81	12.31	6.81	27.06	9.09	4.50	5.87	4.50	8.97	7.77	42.07	4.52	12.64	13.34	12.70	12.70	14.79	22.36
7	463371	Transcript	0	19.88	8.82	10.09	21.14	7.22	5.68	8.41	11.60	6.97	0.00	0.00	3.25	11.85	7.93	0.00	17.52	7.90	9.25	0.00	31.18	12.92	29.22	4.78	17.53	18.72	6.57	7.16	1.66	7.89
8	IG24_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	88.35	113.69	232.65	563.43	205.58	52.17	274.54	172.43	60.40	83.35	79.74	74.30	164.31	25.24	284.95	127.52	51.23	125.41	86.65	66.91	85.55	157.28	134.74	33.74	194.56	397.85	199.55	265.58	234.78
10	E1_Ab	KnownBoundary	0	163.51	213.10	503.18	1097.01	363.71	96.07	585.31	337.26	124.61	169.53	154.91	134.79	289.05	44.18	570.65	268.59	100.39	173.25	113.29	115.45	167.98	300.60	272.15	65.38	387.11	735.81	394.65	501.66	402.24
11	E1_Ac	KnownBoundary	0	553.22	113.34	155.79	426.21	1048.55	128.61	398.21	260.52	240.91	152.19	187.15	214.06	627.27	85.04	900.92	344.86	110.86	233.74	178.03	256.20	297.02	591.53	285.01	63.88	259.67	890.38	512.13	632.68	906.15
12	ER1b	ExonRegion	0	498.25	159.83	439.35	747.15	781.93	142.49	592.35	356.22	253.33	201.58	185.53	263.63	705.54	91.11	683.66	339.64	197.44	175.80	99.10	216.52	285.82	600.00	350.62	71.58	363.44	919.40	498.30	661.29	911.10
13	E1_Ad	KnownBoundary	0	1257.81	162.97	256.55	1015.48	1419.78	340.82	1504.29	398.48	653.08	446.35	236.03	424.33	1197.19	174.46	1854.27	723.75	393.82	390.17	307.06	332.62	453.69	1350.64	581.74	137.34	436.93	1396.51	590.75	1526.37	1021.24
14	ER1c	ExonRegion	0	1142.40	183.62	430.30	831.88	1436.75	279.77	1115.89	409.29	543.51	360.54	257.19	428.52	1221.92	170.15	1299.92	600.04	367.36	278.28	225.98	360.35	454.67	1220.33	549.84	145.24	437.57	1316.65	670.78	1242.20	1218.18
15	ER1d	ExonRegion	0	1383.18	466.03	370.94	1132.50	1376.91	422.38	844.32	789.41	806.41	349.72	408.34	486.18	1252.90	344.79	1560.58	584.31	402.56	383.23	376.66	559.24	636.07	2102.50	520.37	372.49	878.67	1382.96	814.04	1454.30	1123.73
16	E1a_E2b	KnownJunction	0	556.94	304.13	92.91	247.18	216.34	171.62	250.31	554.19	281.05	150.63	103.51	114.24	476.39	165.18	897.14	182.68	111.04	200.09	169.94	352.22	203.16	646.85	125.78	184.53	373.74	365.54	109.43	282.03	299.63
17	I1	Intron	0	0.86	1.29	1.34	0.00	3.92	0.00	0.81	0.00	1.35	0.00	0.96	0.00	0.52	0.00	0.00	0.00	0.00	1.55	0.00	1.11	0.57	2.17	0.00	0.86	0.00	2.52	0.00	0.65	0.00
18	I1_SR1	SilentIntronRegion	0	0.87	1.31	1.36	0.00	3.99	0.00	0.82	0.00	1.36	0.00	0.97	0.00	0.53	0.00	0.00	0.00	0.00	1.57	0.00	1.12	0.58	2.18	0.00	0.88	0.00	2.56	0.00	0.67	0.00
19	E2_Aa	NovelBoundary	0	12.86	17.55	16.97	0.00	40.38	19.61	50.41	19.56	13.25	8.83	5.73	4.37	19.14	3.10	15.35	10.94	7.16	0.00	0.00	7.69	13.80	24.94	6.85	2.63	9.05	11.93	4.17	34.42	14.39
20	ER2a	ExonRegion	0	28.69	12.61	10.98	2.25	22.63	17.07	18.85	15.21	6.79	6.11	4.47	1.81	12.31	6.81	27.06	9.09	4.50	5.87	4.50	8.97	7.77	42.07	4.52	12.64	13.34	12.70	12.70	14.79	22.36
21	E2_Ab	KnownBoundary	0	34.68	12.89	6.73	10.14	0.00	26.93	21.91	9.46	18.67	4.91	6.83	3.04	15.57	8.31	23.72	20.81	6.98	4.62	8.09	26.71	15.76	48.86	6.55	20.58	20.80	9.53	4.77	9.03	19.97
22	ER2b	ExonRegion	0	887.35	535.34	227.06	240.37	262.36	307.86	899.40	693.47	551.59	352.62	327.12	437.61	1219.86	325.31	1670.40	604.03	364.24	438.13	410.98	594.28	375.92	1184.31	474.62	321.34	554.00	982.52	460.63	1009.41	980.61
23	E2_Da	KnownBoundary	0	23.95	0.00	12.91	0.00	0.00	3.91	12.99	4.53	0.00	2.00	3.23	5.27	14.27	7.02	9.97	9.72	28.86	4.62	32.37	23.57	7.46	9.92	2.31	11.48	9.74	7.08	0.00	10.42	5.18
24	E2a_E3a	KnownJunction	1	625.42	445.00	490.05	522.19	548.66	154.93	623.13	458.84	298.43	323.40	479.52	513.51	980.93	348.90	1463.01	196.98	407.33	241.45	283.01	452.03	179.81	617.49	620.50	446.52	521.87	1031.83	1095.08	1814.24	795.66
25	E2a_E4b	KnownJunction	0	5.37	8.82	5.18	0.00	0.00	3.34	12.99	6.27	7.55	1.48	0.00	10.42	12.26	2.22	30.89	2.83	4.25	0.00	8.09	0.00	3.37	2.48	2.51	8.91	0.00	13.48	14.71	12.40	7.20
26	ER2c	ExonRegion	0	18.54	12.03	20.83	6.49	12.77	9.00	8.49	3.66	7.99	5.96	4.71	5.59	7.76	8.61	24.85	15.61	20.26	9.07	5.86	14.88	6.17	14.70	1.45	14.51	7.23	15.07	2.45	3.56	8.24
27	E2_Ac	KnownBoundary	0	28.37	12.31	26.19	21.57	20.78	9.13	2.92	7.02	7.67	8.47	4.08	1.48	9.11	11.65	8.37	13.92	15.35	9.25	0.00	17.37	1.80	20.61	2.46	11.36	10.15	12.45	1.84	5.48	10.96
28	ER2d	ExonRegion	0	33.35	10.75	15.38	17.12	23.38	9.34	12.17	11.93	12.43	11.10	5.82	8.64	10.86	15.46	33.63	20.57	22.91	9.90	11.00	19.93	9.71	27.50	1.89	18.25	19.58	8.54	9.42	4.02	7.16
29	E2_Db	KnownBoundary	0	18.88	4.85	6.70	9.92	0.00	1.50	0.00	13.44	12.39	1.88	3.23	10.15	1.40	8.80	0.00	0.00	21.52	10.02	0.00	4.13	7.34	0.00	2.27	8.91	12.09	1.63	0.00	2.16	3.37
30	E2b_E3a	KnownJunction	0	19.88	8.82	10.09	21.14	7.22	5.68	8.41	11.60	6.97	0.00	0.00	3.25	11.85	7.93	0.00	17.52	7.90	9.25	0.00	31.18	12.92	29.22	4.78	17.53	18.72	6.57	7.16	1.66	7.89
31	E2b_E4b	NovelJunction	0	2.24	0.00	0.00	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.09	2.31	0.00	0.00	1.89	0.00	2.29	2.71
32	ER2e	ExonRegion	0	8.98	5.36	5.51	1.95	1.57	2.88	4.53	6.30	6.16	6.87	3.48	4.88	3.28	9.93	20.54	15.21	24.92	5.26	3.54	8.49	6.51	2.89	0.38	9.90	7.68	2.74	2.35	4.10	3.39
33	E2_Dc	NovelBoundary	0	21.88	0.00	9.87	0.00	0.00	0.00	2.23	7.51	10.02	5.19	3.01	5.87	4.39	11.32	16.54	9.33	49.36	4.62	0.00	4.13	3.61	0.00	0.00	13.64	19.02	0.00	8.35	8.09	14.66
34	I2	Intron	0	6.01	4.98	0.50	2.16	1.47	3.44	1.01	1.48	3.43	1.88	0.95	2.22	1.36	3.40	10.21	6.01	11.67	2.70	2.56	2.61	3.00	0.90	0.18	6.25	3.58	0.94	0.73	1.14	2.75
35	I2_SR1	SilentIntronRegion	0	6.05	5.01	0.51	2.17	1.48	3.46	1.02	1.48	3.45	1.89	0.96	2.24	1.37	3.41	10.25	6.04	11.73	2.72	2.58	2.62	3.02	0.91	0.18	6.29	3.60	0.95	0.74	1.15	2.77
36	E3_Aa	NovelBoundary	0	10.85	0.00	1.17	0.00	0.00	3.91	0.00	4.93	1.43	1.92	2.85	2.77	0.00	6.60	9.77	9.64	15.04	4.62	8.09	0.00	0.00	0.00	0.00	2.81	3.83	1.89	0.00	4.58	7.89
37	ER3a	ExonRegion	0	666.98	427.11	438.90	543.33	720.83	176.14	452.89	551.01	322.82	235.82	283.52	296.37	627.86	298.37	1242.96	209.01	269.70	225.00	216.38	505.76	187.54	646.40	306.54	430.49	497.61	568.95	708.88	952.23	455.13
38	E3_Da	NovelBoundary	0	7.90	0.00	2.14	10.78	0.00	3.61	0.00	0.00	4.32	0.00	0.00	1.84	0.00	5.14	15.75	10.86	19.56	13.87	0.00	3.14	5.82	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00
39	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E3a_E4b	KnownJunction	0	695.73	560.96	348.66	814.67	842.82	271.76	385.74	679.90	424.96	181.35	144.00	150.42	505.97	285.80	1786.30	246.86	150.02	281.01	315.16	546.89	214.87	665.72	158.44	408.36	387.07	380.22	154.46	335.23	324.09
41	I3	Intron	0	3.64	3.69	2.03	0.00	1.19	2.67	1.47	2.24	1.50	1.40	0.00	1.65	0.95	2.64	11.15	5.42	5.80	3.27	2.33	2.01	3.46	0.00	0.44	5.22	2.08	1.53	0.89	1.58	0.65
42	I3_AR1	ActiveIntronRegion	0	3.68	3.73	2.04	0.00	1.17	2.70	1.48	2.26	1.51	1.42	0.00	1.67	0.96	2.66	11.26	5.48	5.86	3.31	2.35	2.03	3.50	0.00	0.44	5.27	2.10	1.54	0.90	1.60	0.66
43	E4_Aa	NovelBoundary	0	11.86	0.00	1.27	0.00	0.00	4.95	2.69	2.29	1.28	2.04	1.30	1.20	0.00	5.23	17.74	3.75	5.02	9.25	0.00	7.77	7.50	4.67	2.51	13.16	0.00	1.72	1.89	0.00	0.00
44	ER4a	ExonRegion	0	19.86	14.87	11.40	20.78	22.68	6.80	10.40	18.07	9.58	5.62	4.17	5.27	12.89	10.12	57.33	6.73	7.14	12.07	7.74	16.64	5.67	19.26	4.47	13.42	9.74	8.97	6.70	10.34	8.41
45	E4_Ab	KnownBoundary	0	5.49	0.00	1.42	0.00	0.00	1.96	0.00	0.00	1.89	0.00	0.00	1.51	0.00	3.17	17.54	3.06	7.72	0.00	0.00	4.13	1.85	0.00	0.00	8.55	1.48	0.00	2.48	2.29	0.00
46	ER4b	ExonRegion	0	461.19	326.53	206.26	811.24	1005.42	120.20	242.80	306.85	209.42	143.08	114.36	114.48	326.95	178.82	872.06	148.77	96.42	160.64	152.53	321.72	133.91	492.45	138.88	269.97	308.40	266.58	141.26	273.77	211.56
47	ER4c	ExonRegion	1	28.58	24.09	13.09	26.81	21.59	5.50	9.41	11.05	14.61	15.88	22.61	14.02	29.88	15.42	175.49	26.99	11.35	29.11	25.65	21.55	4.75	17.43	13.86	12.19	17.63	41.91	25.03	51.62	24.16
48	ER4d	ExonRegion	0	3.75	3.28	0.00	0.00	0.00	0.69	0.50	4.60	0.84	0.00	4.17	1.55	2.27	0.00	28.00	2.53	0.75	0.00	1.13	0.00	0.71	1.35	1.36	1.08	0.71	0.39	0.46	7.34	0.67
49	IG25_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00