Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C1orf183	Gene	0	15.46	7.45	68.79	19.27	16.46	20.66	8.05	18.45	6.00	12.23	3.68	6.14	11.02	24.90	11.41	6.74	20.41	14.18	13.32	16.69	5.33	7.20	14.59	15.80	9.92	12.81	63.71	12.42	5.69
2	444059	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.53	0.00	0.00	0.00	0.00	0.64	0.00	0.24	0.00	0.01	1.60	0.00	0.00	0.00	1.41	0.05	0.00	0.00	1.09	0.03	0.00	0.00	0.00
3	428322	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	357260	Transcript	0	11.91	7.86	52.27	16.46	17.50	17.75	6.29	15.62	8.26	11.15	3.09	5.63	10.66	23.76	10.65	6.24	18.30	10.23	10.48	11.86	4.42	6.79	11.90	16.42	9.50	10.73	66.26	10.90	4.76
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.00	0.00	0.10	0.00	0.48	0.00	0.03	1.10	0.00	0.00	0.00	1.26	0.09	0.00	0.00	0.59	0.06	0.00	0.00	0.00
6	E1_Da	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	12.32	0.00	2.19	1.55	0.00	0.00	1.30	1.62	2.26	0.00	3.29	2.34	0.00	0.00	0.00	0.00	4.42	2.07	0.00	1.78	1.67	0.00	0.00	1.39
7	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00	2.09	0.00	0.00	0.00	1.56	0.00	0.00	0.00	1.59	0.00	0.00	0.00	0.00
8	Ix_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	0.00
9	Ix_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.46	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	1.19	0.00
10	Ix_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	6.52	0.00
11	Ix_AR5	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	6.52	0.00
12	Ix_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.15	0.00	1.43	0.00	0.00	6.52	0.00
13	Ix_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.39	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	6.52	0.00
14	Ix_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	4.54	0.00
15	Ix_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.00
16	E2_Aa	NovelBoundary	0	2.65	0.00	1.22	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	19.68	3.42	35.65	17.01	7.95	10.40	4.46	10.50	1.19	3.74	0.37	0.73	5.65	8.21	5.63	3.34	7.52	11.64	10.88	19.36	1.23	4.80	9.18	9.23	3.24	6.10	13.20	6.24	3.07
18	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.84	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E3a	KnownJunction	0	24.95	13.09	16.49	0.00	5.60	39.79	10.64	28.91	6.55	9.67	2.47	0.00	6.56	13.09	9.97	11.17	16.27	23.12	16.18	40.27	5.50	2.33	20.34	21.65	9.28	12.10	0.00	6.38	8.06
20	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3a	ExonRegion	0	14.95	2.96	80.46	13.79	9.22	16.00	9.08	13.24	2.44	7.91	4.74	4.33	8.61	20.30	6.67	5.06	22.49	17.12	17.60	28.30	4.73	8.45	13.70	10.57	7.81	16.82	26.45	10.31	4.82
23	E3_Da	KnownBoundary	0	25.01	0.00	108.55	80.67	12.67	33.76	23.06	16.37	3.20	3.79	3.04	7.47	6.40	27.45	8.17	7.42	29.40	9.25	40.46	52.10	2.05	15.65	2.51	15.85	13.71	26.26	76.98	13.21	1.88
24	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3b	ExonRegion	0	18.11	6.55	80.54	16.42	14.58	22.72	10.22	20.70	4.30	12.46	4.01	6.22	10.70	23.56	13.53	7.75	20.63	18.19	15.18	18.68	6.15	7.40	17.46	13.44	9.53	14.78	49.98	13.79	7.07
26	E3_Db	KnownBoundary	0	25.95	14.45	70.06	9.92	12.97	64.88	13.16	15.48	3.08	6.11	0.00	1.87	7.29	34.08	0.00	7.19	15.53	4.62	0.00	11.25	6.06	16.00	14.43	4.43	5.80	3.73	83.09	10.78	5.22
27	ER3c	ExonRegion	0	17.77	9.65	84.85	29.04	20.61	25.55	8.55	22.79	6.57	15.94	4.66	8.26	13.51	32.37	12.33	7.44	25.44	15.60	15.47	19.86	6.46	8.23	16.69	20.32	12.79	14.36	93.56	14.29	6.06
28	E3_Ab	KnownBoundary	0	19.29	13.38	86.80	19.41	67.35	20.72	19.97	23.84	13.49	26.76	10.31	3.49	13.34	28.63	34.08	3.06	27.53	27.74	40.46	31.01	11.35	4.23	14.82	28.23	7.73	18.24	62.47	36.30	5.91
29	ER3d	ExonRegion	0	9.31	8.06	50.96	10.10	15.49	20.80	10.15	13.59	5.17	13.78	2.64	2.45	15.66	29.22	6.82	4.92	26.94	12.26	13.58	13.08	7.26	3.57	12.76	19.20	9.85	13.49	47.89	26.38	8.37
30	E3_Dc	KnownBoundary	0	8.43	9.50	28.33	0.00	5.60	11.86	4.98	9.51	2.71	12.90	0.00	4.16	22.86	34.74	8.57	0.00	32.44	9.25	16.18	14.64	3.53	6.95	15.91	33.92	10.42	7.72	45.92	17.03	14.62
31	ER3e	ExonRegion	0	6.06	6.07	19.68	3.87	14.40	9.94	4.04	8.45	9.96	6.36	1.52	3.00	7.82	15.15	8.97	5.04	11.16	4.86	5.49	3.87	2.37	5.35	7.11	12.52	6.22	7.09	38.96	7.50	3.46
32	IG29_SR3	SilentIntergenicRegion	0	0.00	3.28	1.75	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	0.00	0.00	0.67	0.00	4.03	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	IG29_AR1	ActiveIntergenicRegion	0	0.00	3.28	0.00	0.00	0.00	2.75	0.00	0.00	0.00	1.44	0.00	1.55	0.00	1.81	0.00	0.00	1.00	2.73	0.57	0.00	0.00	0.00	0.00	2.15	0.00	0.00	1.83	0.00	0.00
34	IG29_SR1	SilentIntergenicRegion	0	0.00	1.77	0.00	0.00	0.00	2.71	0.00	0.00	0.00	0.67	0.00	0.44	0.00	1.74	0.00	0.00	0.80	1.61	4.06	0.00	0.00	0.00	0.00	0.22	0.00	0.00	0.61	0.00	0.00