Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM69A	Gene	0	49.71	129.48	57.55	152.39	330.63	108.10	70.87	33.04	66.94	124.70	241.20	90.94	154.88	50.15	40.29	43.85	48.56	144.92	104.08	30.13	92.56	36.13	142.66	70.95	43.82	17.61	161.54	49.84	50.34
2	401027	Transcript	0	0.00	0.00	0.30	1.91	0.51	0.60	0.20	0.25	0.07	0.10	0.23	0.39	0.66	0.24	0.00	0.11	0.07	0.00	0.00	0.00	0.10	0.00	0.76	0.00	0.10	0.00	0.11	0.27	0.00
3	370310	Transcript	0	54.75	146.69	83.49	177.94	292.83	106.00	70.06	43.93	50.27	132.67	296.39	90.45	161.13	53.84	36.80	44.04	49.33	186.93	76.56	29.85	96.92	43.93	171.83	60.42	48.39	11.79	182.91	55.32	42.96
4	ER1a	ExonRegion	0	0.00	0.00	0.68	5.72	1.52	1.26	0.61	0.00	0.00	0.00	0.47	0.91	1.47	0.00	0.00	0.33	0.00	0.00	0.00	0.00	0.00	0.00	2.28	0.00	0.00	0.00	0.32	0.50	0.00
5	ER1b	ExonRegion	0	31.50	56.85	62.14	165.24	451.67	57.03	37.88	21.07	19.74	93.46	129.00	65.19	80.13	19.96	14.00	51.88	28.26	122.06	69.20	17.97	49.33	15.67	126.75	19.01	30.51	24.65	63.44	47.88	35.25
6	E1a_E2a	KnownJunction	0	10.62	54.20	110.57	108.28	213.39	27.01	6.75	11.60	23.97	29.88	99.65	54.76	72.03	23.22	18.34	6.58	39.62	70.64	56.65	23.98	28.68	6.86	31.86	13.70	14.55	1.89	45.13	21.43	39.81
7	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	I1_SR1	SilentIntronRegion	0	3.35	1.31	2.39	0.98	1.99	0.28	2.47	2.75	4.01	1.96	1.70	2.47	5.11	0.71	1.94	1.62	2.94	7.55	3.04	1.31	1.26	0.86	0.61	2.93	0.78	1.50	1.25	3.10	0.91
9	I1_AR1	ActiveIntronRegion	0	6.13	1.75	3.64	1.95	5.98	2.24	6.29	1.75	15.48	8.24	11.82	8.89	13.48	1.60	13.86	2.70	13.80	12.84	6.08	0.75	2.91	2.94	1.97	14.92	1.94	2.35	4.23	6.21	1.82
10	I1_SR2	SilentIntronRegion	0	0.29	6.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.77	3.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	31.47	72.44	17.70	28.06	87.20	49.94	20.16	26.10	21.25	59.42	80.32	39.78	67.54	26.10	13.28	38.19	25.47	105.14	55.99	18.84	50.16	17.41	45.02	30.63	26.69	8.52	30.05	23.52	25.83
12	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.22	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52
13	E2a_E3a	KnownJunction	0	52.44	161.62	8.94	45.08	113.92	179.60	94.46	29.96	56.73	250.30	248.14	115.84	181.86	52.62	51.42	152.69	56.57	386.06	193.99	38.70	176.04	29.17	187.35	37.38	85.13	43.77	84.39	96.33	77.98
14	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	2.04	0.00	0.00	1.56	1.37	0.00	0.00	0.00	4.62	0.00	0.00	6.10	0.00	2.07	0.00	0.00	0.00	0.00	0.00	0.00
15	I2_AR1	ActiveIntronRegion	0	0.00	1.11	0.00	0.89	0.00	1.79	0.00	0.57	2.74	0.00	0.57	0.00	0.62	0.00	0.00	0.00	0.00	0.92	0.00	0.00	2.72	0.00	0.00	1.03	0.68	0.00	0.00	0.00	0.00
16	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.32	1.88	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00
17	I2_AR2	ActiveIntronRegion	0	0.00	2.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3a	ExonRegion	0	29.35	95.35	42.57	75.77	197.05	73.62	60.68	19.19	39.62	141.16	271.01	102.84	147.61	51.41	29.46	58.72	46.08	197.11	107.07	26.02	75.69	22.30	187.62	54.34	39.98	23.31	123.24	64.52	53.09
19	E3_Da	NovelBoundary	0	0.00	4.07	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00	0.00	5.30	0.00
20	E3a_E4a	KnownJunction	0	40.64	86.38	97.07	95.34	514.33	63.92	23.52	10.45	26.62	91.36	219.39	58.97	118.75	44.53	9.97	41.00	39.89	174.67	56.65	30.93	76.93	21.39	96.97	50.60	21.94	6.39	127.52	28.71	22.58
21	ER4a	ExonRegion	0	51.56	129.61	87.27	248.96	516.36	100.41	64.04	24.86	33.24	147.86	275.43	86.18	131.90	61.97	25.00	44.60	46.18	185.72	85.66	38.24	88.66	39.07	154.75	58.59	53.28	13.02	137.77	44.18	35.13
22	E4a_E7a	KnownJunction	0	55.68	151.63	107.88	197.79	249.65	92.54	61.51	51.61	22.14	135.14	334.44	83.64	151.96	54.33	27.31	44.45	46.14	228.73	40.46	28.04	92.98	48.13	194.54	40.85	50.88	5.41	182.64	58.37	30.97
23	ER5a	ExonRegion	0	0.00	0.00	0.22	0.00	0.00	0.55	0.00	0.74	0.22	0.29	0.24	0.25	0.52	0.73	0.00	0.00	0.20	0.00	0.00	0.00	0.29	0.00	0.00	0.00	0.29	0.00	0.00	0.33	0.00
24	I5	Intron	0	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	1.54	2.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I5_SR1	SilentIntronRegion	0	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	1.56	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E7_Aa	NovelBoundary	0	5.96	15.90	1.54	8.84	0.00	1.53	0.00	0.00	0.00	1.92	0.00	3.01	1.53	0.00	8.37	0.00	1.17	0.00	0.00	0.00	1.93	0.00	0.00	2.57	1.55	0.00	0.00	2.07	0.00
28	ER7a	ExonRegion	0	53.81	141.75	59.11	158.09	336.02	119.45	78.62	36.26	78.41	130.21	258.35	97.26	170.31	53.36	46.30	43.64	52.52	145.13	112.66	31.66	100.86	39.73	149.12	80.00	45.90	18.18	183.17	52.28	54.94
29	IG1	Intergenic	0	1.98	5.20	1.16	9.93	10.12	7.93	4.65	2.12	2.33	6.34	14.83	3.13	3.59	2.71	1.06	4.01	1.72	12.15	10.32	3.18	5.60	0.00	4.59	1.49	2.31	1.45	8.45	3.39	3.70
30	IG1_AR1	ActiveIntergenicRegion	0	2.00	5.25	1.17	10.02	10.21	8.00	4.69	2.14	2.35	6.40	14.97	3.16	3.62	2.73	1.07	4.04	1.74	12.26	10.37	3.21	5.62	0.00	4.63	1.50	2.33	1.46	8.53	3.42	3.73