Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TTC4	Gene	0	8.68	7.23	14.46	43.35	21.05	7.48	10.53	13.61	5.98	10.19	15.15	10.02	13.72	8.38	5.41	10.99	13.30	9.79	12.48	8.99	8.09	8.08	16.32	5.41	8.39	17.71	22.17	14.01	16.99
2	371281	Transcript	0	4.65	4.41	7.23	24.02	30.32	6.66	6.79	13.69	6.95	6.12	4.34	6.24	12.56	5.91	8.09	8.75	7.10	5.41	11.70	8.83	7.04	5.03	7.59	4.61	3.30	6.56	16.48	11.33	5.76
3	486621	Transcript	0	4.14	3.26	1.37	11.55	3.41	4.30	3.32	0.00	0.00	2.43	6.21	1.97	2.89	3.54	0.00	4.44	4.01	10.34	22.19	6.29	6.26	0.00	0.00	2.89	2.67	0.00	9.90	1.17	0.60
4	371284	Transcript	0	0.32	0.19	0.00	0.00	0.00	0.97	1.58	0.00	0.00	0.30	0.00	0.00	0.00	0.14	0.00	0.00	0.00	0.00	0.00	0.57	1.32	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.01
5	486091	Transcript	0	1.32	1.47	0.59	1.64	0.00	0.67	0.58	1.16	2.36	1.08	0.95	0.90	0.49	1.40	3.41	1.42	1.02	1.87	0.81	1.84	0.90	0.21	0.31	0.12	0.77	2.00	0.00	1.04	0.01
6	ER1a	ExonRegion	0	5.60	0.67	6.09	31.24	58.08	7.15	7.65	11.72	1.07	6.50	4.92	9.42	16.59	3.53	7.89	12.02	8.01	6.45	10.59	9.39	7.62	7.70	10.85	3.23	0.75	5.43	25.97	17.56	6.38
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	22.11	7.56	0.00	12.54	2.25	2.04	0.00	1.39	1.62	0.95	16.74	11.47	1.22	4.62	0.00	7.86	4.09	4.96	7.49	2.93	0.00	2.19	9.99	6.78	1.65
8	E1_Ac	KnownBoundary	0	18.17	4.07	20.21	140.20	158.87	16.00	27.23	22.39	7.31	13.66	21.76	38.19	39.96	8.91	0.00	28.76	16.84	4.62	8.09	22.00	17.05	20.57	14.73	8.19	1.82	22.53	47.71	38.55	20.93
9	ER1b	ExonRegion	0	25.72	3.28	19.08	138.94	205.90	26.12	37.63	34.98	11.24	34.65	21.42	45.76	53.26	9.98	11.20	45.55	23.04	21.83	31.68	25.30	32.81	40.86	34.36	10.76	4.29	23.57	82.42	61.94	21.47
10	ER1c	ExonRegion	0	83.64	53.17	129.93	452.56	209.36	60.90	94.91	121.90	33.46	93.12	154.21	99.71	126.56	79.71	33.16	106.79	130.91	88.94	91.45	71.98	63.29	92.20	175.75	42.85	75.78	187.57	233.25	140.32	188.45
11	E1_Da	KnownBoundary	0	2.65	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	92.31	0.00	23.79	27.82	25.64	23.63	37.88	93.66	11.27	24.41	35.56	16.42	31.05	50.61	9.97	19.35	16.21	65.88	72.83	73.02	30.68	109.78	15.07	38.16	23.75	11.76	9.64	18.74	14.96
13	ER1d	ExonRegion	0	0.64	0.37	0.00	0.00	0.00	0.17	0.59	0.00	0.00	0.59	0.00	0.00	0.00	0.27	0.00	0.00	0.01	0.00	0.00	1.13	1.08	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.01
14	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.76	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	92.41	73.35	15.10	20.45	22.71	76.70	107.04	134.32	40.06	98.23	129.13	83.00	127.61	70.67	39.39	126.13	103.63	101.03	105.17	92.01	78.19	96.78	132.43	47.25	91.74	144.42	110.92	93.78	146.05
16	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	11.96	11.56	117.58	201.10	123.46	16.39	22.82	17.71	4.22	26.17	63.33	39.21	34.54	13.50	0.90	14.00	53.81	19.66	35.31	17.33	17.15	4.75	71.44	12.56	16.07	68.88	139.73	65.62	57.53
18	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3b	ExonRegion	0	4.14	3.26	1.37	11.55	3.41	4.30	3.32	0.00	0.00	2.43	6.21	1.97	2.89	3.54	0.00	4.44	4.01	10.34	22.19	6.29	6.26	0.00	0.00	2.89	2.67	0.00	9.90	1.17	0.60
21	E3_Db	NovelBoundary	0	7.49	3.49	1.54	0.00	6.93	5.56	2.40	2.39	1.34	5.27	1.49	1.51	0.00	6.62	9.97	3.82	6.01	0.00	16.18	0.00	7.38	0.00	2.22	2.87	0.00	0.00	0.00	0.00	0.00
22	Ix	Intron	0	4.20	3.42	2.22	4.96	3.10	2.46	2.09	1.38	0.94	3.16	3.63	1.46	1.04	3.16	1.75	4.43	2.49	5.50	9.76	1.75	4.44	0.31	0.42	2.23	2.22	1.54	2.22	3.01	0.69
23	Ix_SR1	SilentIntronRegion	0	4.16	2.98	2.34	5.23	3.27	2.45	2.21	1.45	0.99	3.33	3.78	1.35	1.10	3.29	1.84	4.68	2.63	5.80	10.19	1.63	4.62	0.24	0.44	2.35	2.35	1.62	2.34	3.17	0.73
24	Ix_AR1	ActiveIntronRegion	0	5.12	11.95	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	1.08	3.57	0.00	0.76	0.00	0.00	0.00	0.00	1.95	4.02	1.17	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	0.00	0.00	19.94	433.32	180.23	0.00	0.00	0.00	1.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00
26	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER5a	ExonRegion	0	0.00	0.00	1.24	4.27	4.62	0.00	0.00	0.00	0.29	0.02	0.00	0.00	0.00	0.55	0.00	0.00	0.57	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.38	0.00	0.00
28	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	Ix	Intron	0	0.24	0.71	0.18	0.00	0.54	1.43	0.55	0.20	4.96	0.63	1.76	0.57	0.21	0.35	0.51	0.14	0.90	0.78	1.05	0.15	0.86	0.30	0.10	0.35	0.94	0.17	0.00	0.27	0.51
30	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.00	1.83	1.20	2.53	0.00	1.14	0.00	0.00	0.00	3.55	7.16	4.53	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00
31	Ix_AR2	ActiveIntronRegion	0	0.00	3.04	0.00	0.00	0.00	1.19	0.00	0.00	1.66	0.73	1.43	1.16	0.44	0.29	0.00	0.00	1.69	2.44	0.06	0.00	0.90	0.00	0.57	0.00	0.68	0.00	0.00	0.51	0.00
32	Ix_SR2	SilentIntronRegion	0	0.41	0.31	0.16	0.00	0.46	2.09	0.58	0.35	5.98	0.82	2.04	0.53	0.18	0.52	0.88	0.24	0.71	0.18	1.52	0.26	1.22	0.51	0.00	0.20	0.95	0.30	0.00	0.16	0.89
33	Ix_SR3	SilentIntronRegion	0	0.00	0.00	0.48	0.00	1.41	0.00	1.16	0.00	6.14	0.00	1.37	0.36	0.00	0.00	0.00	0.00	0.43	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.82	0.00	0.00	0.47	0.00
34	ER6a	ExonRegion	0	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.00	0.53	0.00	0.00
35	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.32
37	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E9_Aa	NovelBoundary	0	2.48	4.75	1.27	0.00	0.00	3.53	2.63	4.48	0.00	0.00	0.00	4.31	0.00	3.97	0.00	0.00	4.64	0.00	0.00	2.98	0.00	0.00	0.00	5.74	1.93	0.00	0.00	0.00	0.00
41	ER9a	ExonRegion	0	1.32	1.47	0.59	1.64	0.00	0.67	0.58	1.16	2.36	1.08	0.95	0.90	0.49	1.40	3.41	1.42	1.02	1.87	0.81	1.84	0.90	0.21	0.31	0.12	0.77	2.00	0.00	1.04	0.01
42	E9_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER9b	ExonRegion	0	1.65	0.00	1.83	0.00	0.00	1.27	1.23	1.12	2.47	0.81	2.50	2.88	0.71	2.19	2.73	0.00	0.00	0.00	3.09	0.00	0.00	0.00	0.00	0.00	2.25	0.71	0.00	1.89	0.77
44	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	Ix_AR2	ActiveIntronRegion	0	2.09	0.63	0.00	0.00	0.00	0.27	0.00	0.72	2.62	1.41	1.39	0.24	0.76	1.23	0.00	0.97	0.87	1.12	0.62	1.07	1.11	0.00	0.00	1.26	0.56	0.00	0.00	0.63	0.00
46	ER10a	ExonRegion	0	1.72	2.57	5.30	5.28	0.94	1.89	3.18	4.04	4.03	2.44	1.42	1.40	4.37	2.19	3.05	1.24	2.34	1.40	3.72	1.43	2.91	1.02	1.50	2.56	1.61	1.20	2.27	2.83	2.82
47	E10_Da	KnownBoundary	0	20.82	0.00	33.21	29.55	7.37	25.36	27.18	44.89	55.79	29.32	5.57	11.17	47.86	24.53	44.45	10.48	25.80	19.01	24.28	14.39	34.74	13.61	11.57	25.24	23.30	11.93	42.19	18.42	23.01
48	ER10b	ExonRegion	0	3.71	8.16	8.36	16.80	2.56	6.17	5.93	15.66	12.82	5.75	3.75	3.07	8.52	8.29	8.29	5.49	6.19	4.37	12.81	8.28	6.47	2.36	4.32	5.99	5.86	7.70	6.99	5.10	5.15
49	IG10_AR2	ActiveIntergenicRegion	0	2.11	2.92	2.12	1.01	1.38	1.55	0.85	2.59	2.45	2.24	2.18	1.22	4.29	1.34	4.15	0.70	1.05	0.81	0.00	3.39	3.01	0.25	2.29	1.52	0.60	2.66	4.39	0.92	0.19
50	IG10_SR3	SilentIntergenicRegion	0	1.01	5.48	4.98	2.42	3.30	5.58	2.59	4.23	3.11	5.18	5.96	2.71	4.51	3.58	1.31	2.18	2.93	1.69	0.65	1.01	5.60	1.59	7.34	2.33	2.32	4.68	8.55	2.21	1.27