Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	BEND5	Gene	0	67.64	24.44	73.27	44.98	0.47	19.09	52.08	95.35	11.90	58.90	71.08	27.38	16.88	7.41	18.92	9.87	42.76	31.14	2.59	133.52	9.80	14.66	23.72	22.78	5.11	12.19	8.96	47.83	53.04
2	480399	Transcript	0	1.47	0.00	0.00	0.00	0.00	1.96	2.24	1.99	0.53	3.05	1.27	0.00	0.00	0.00	2.36	0.00	1.59	0.14	0.00	0.00	0.00	0.88	0.00	0.06	0.00	0.92	0.00	0.02	0.00
3	463562	Transcript	0	28.49	31.22	40.99	32.35	0.00	10.47	32.04	47.03	10.87	28.96	44.70	9.16	3.03	5.36	7.57	7.34	19.65	23.12	0.00	83.77	2.01	0.00	9.55	6.10	3.18	6.05	2.19	17.03	6.44
4	294347	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	371833	Transcript	0	1.28	0.98	2.00	0.00	0.00	0.10	1.73	0.88	0.17	0.78	2.20	0.14	0.01	0.13	0.00	0.00	1.92	0.57	0.00	6.59	0.02	2.23	1.59	0.32	0.00	0.70	0.54	1.18	0.84
6	489956	Transcript	0	1.55	0.00	0.30	0.00	0.00	0.44	0.00	0.65	0.00	0.25	0.00	0.00	0.00	0.00	0.00	0.01	0.26	0.00	0.00	0.44	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.00
7	476096	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	476079	Transcript	0	27.66	12.80	5.71	21.14	0.00	8.25	8.75	42.00	0.00	17.42	17.05	6.33	3.22	2.26	8.17	3.82	17.20	0.00	0.00	33.49	2.05	7.29	2.12	5.56	0.00	12.45	0.00	12.85	5.58
9	ER1a	ExonRegion	0	2.93	0.00	0.00	0.00	0.00	0.00	2.02	1.70	1.06	0.15	0.00	0.00	0.00	0.00	4.72	0.00	0.00	0.29	0.00	0.00	0.00	1.76	0.00	0.11	0.00	0.00	0.00	0.04	0.00
10	E1_Ab	KnownBoundary	0	2.65	0.00	2.57	0.00	0.00	0.00	5.21	2.39	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	2.71	0.00	4.26	17.69	0.00	0.00	2.35	0.00	0.00	1.92	0.00	1.27	0.00	0.00	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	1.84	5.68
12	ER1b	ExonRegion	0	4.13	0.00	3.13	11.49	0.00	0.20	3.60	1.84	1.12	1.44	0.00	1.06	0.00	0.00	4.00	2.53	0.00	4.68	0.00	1.61	0.00	1.80	0.00	3.07	0.00	0.00	0.00	1.63	5.66
13	ER1c	ExonRegion	0	20.98	4.63	41.81	62.78	0.00	6.08	18.36	12.68	3.18	28.02	16.71	3.95	2.26	1.14	6.34	4.22	6.97	20.74	2.08	28.26	3.63	5.59	5.47	8.96	1.04	3.98	4.30	14.91	13.68
14	E1_Ad	KnownBoundary	0	24.01	8.34	53.64	37.10	0.00	4.99	23.34	30.46	5.45	27.88	13.10	7.41	3.03	1.77	8.37	3.75	11.84	41.61	8.09	64.01	0.00	1.90	9.55	13.40	3.22	0.00	4.08	12.27	7.56
15	ER1d	ExonRegion	0	49.67	17.16	42.53	54.93	0.00	10.92	34.66	54.23	5.78	37.96	21.68	7.80	8.08	4.87	19.10	7.45	11.41	36.81	3.54	102.71	6.63	11.82	18.35	17.01	1.52	7.10	6.42	15.15	25.94
16	E1a_E2a	KnownJunction	0	63.41	35.58	23.62	40.98	0.00	16.15	71.58	70.32	16.05	88.68	56.25	28.40	15.83	5.83	33.88	16.75	22.37	23.12	0.00	139.93	6.82	18.13	12.41	44.74	5.30	12.45	0.00	28.76	36.64
17	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	3.91	2.46	2.29	0.00	5.95	2.53	0.00	0.00	0.00	0.00	0.00	3.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00
18	E1a_E3b	NovelJunction	0	2.83	0.00	0.00	0.00	0.00	0.00	5.72	0.00	0.00	5.23	6.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	4.09	0.00
19	E2_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	1.35
20	ER2a	ExonRegion	0	96.12	33.95	79.66	61.78	0.00	29.20	75.40	143.33	9.67	103.90	121.00	37.61	20.18	10.00	29.30	14.43	46.97	52.81	1.05	246.54	16.33	19.57	31.32	47.74	6.09	15.59	15.58	59.97	65.36
21	E2_Da	KnownBoundary	0	5.49	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E2a_E3a	KnownJunction	0	28.49	31.22	40.99	32.35	0.00	10.47	32.04	47.03	10.87	28.96	44.70	9.16	3.03	5.36	7.57	7.34	19.65	23.12	0.00	83.77	2.01	0.00	9.55	6.10	3.18	6.05	2.19	17.03	6.44
23	E2a_E3b	KnownJunction	0	61.88	31.61	125.94	113.02	0.00	14.85	53.04	68.03	6.58	57.32	31.54	32.47	12.55	7.84	16.54	20.27	42.50	32.36	0.00	178.13	3.49	22.17	23.44	19.62	0.00	10.90	6.41	51.18	48.79
24	ER2b	ExonRegion	0	1.55	0.00	0.30	0.00	0.00	0.44	0.00	0.65	0.00	0.25	0.00	0.00	0.00	0.00	0.00	0.01	0.26	0.00	0.00	0.44	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.00
25	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3a	ExonRegion	0	39.59	17.22	52.47	39.47	0.00	11.05	25.50	53.06	5.01	39.96	49.78	10.61	6.76	7.10	8.03	2.53	24.78	13.02	0.16	89.09	3.49	4.78	13.27	13.24	4.46	3.71	3.62	34.86	20.38
27	E3_Ab	KnownBoundary	0	36.39	13.19	53.17	20.28	0.00	9.98	24.66	41.11	3.14	40.35	53.59	7.77	11.81	7.36	28.10	7.04	29.19	13.87	0.00	71.12	9.79	7.44	14.09	11.07	1.93	3.78	0.00	31.86	24.99
28	E3_Ac	KnownBoundary	0	103.81	21.81	169.12	196.06	0.00	35.03	67.63	186.22	19.40	118.72	99.84	47.20	27.23	6.16	32.69	11.02	55.55	60.75	0.00	251.74	11.27	24.55	19.70	42.41	12.01	18.62	12.18	68.30	66.36
29	ER3b	ExonRegion	0	106.80	38.06	195.78	166.68	0.00	28.06	80.07	153.38	15.07	114.31	96.19	49.52	30.41	12.76	38.82	19.63	70.81	46.30	4.53	264.59	13.72	28.91	29.37	37.39	7.89	18.16	10.86	74.48	73.22
30	ER3c	ExonRegion	0	99.72	33.67	162.05	140.92	0.00	34.85	72.44	158.14	13.90	90.69	67.98	53.34	31.88	11.77	27.19	7.80	67.14	57.43	4.05	255.48	13.19	28.81	33.11	38.94	7.06	16.60	8.36	70.47	61.38
31	E3_Da	KnownBoundary	0	68.36	36.36	136.63	78.08	0.00	35.49	66.54	156.91	13.89	73.22	70.13	41.20	25.92	15.07	32.49	3.14	66.58	50.86	0.00	216.42	9.02	31.46	32.50	17.17	3.49	13.52	13.22	59.62	43.05
32	ER3d	ExonRegion	0	144.70	38.58	156.18	91.57	1.82	27.31	84.52	213.66	10.70	103.73	109.93	56.62	28.59	15.32	39.22	14.57	94.64	63.76	3.06	268.00	13.41	32.69	47.90	39.19	9.31	24.89	10.39	89.32	84.78
33	E3_Ad	KnownBoundary	0	137.14	44.79	242.35	137.40	0.00	42.82	94.35	197.67	14.43	105.10	86.52	53.73	23.72	11.79	47.44	10.17	96.14	51.50	0.00	218.99	15.24	37.24	56.98	27.69	6.86	13.09	2.24	117.32	110.36
34	ER3e	ExonRegion	0	126.79	33.74	236.79	135.39	0.00	34.62	88.82	157.38	16.41	92.97	73.50	48.05	27.91	12.34	27.49	9.28	95.89	51.28	3.84	227.75	15.73	35.24	50.30	23.73	6.71	14.10	4.27	100.27	87.97
35	E3_Db	NovelBoundary	0	2.65	9.70	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00	0.89	0.00	0.00	2.63	4.62	0.00	4.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00
36	E3b_E4a	KnownJunction	0	110.83	26.18	200.96	99.43	0.00	18.72	83.19	110.38	20.10	67.35	70.92	39.46	24.71	9.64	7.77	10.17	75.92	9.12	0.00	177.31	15.44	28.15	35.90	27.34	10.65	11.20	8.55	68.92	53.28
37	E3b_E5a	KnownJunction	0	27.66	12.80	5.71	21.14	0.00	8.25	8.75	42.00	0.00	17.42	17.05	6.33	3.22	2.26	8.17	3.82	17.20	0.00	0.00	33.49	2.05	7.29	2.12	5.56	0.00	12.45	0.00	12.85	5.58
38	E3b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	Ix_SR3	SilentIntronRegion	0	9.11	2.47	1.97	8.85	0.00	1.72	3.05	4.80	0.39	0.80	3.56	1.16	0.42	1.78	0.69	1.78	4.30	7.87	2.89	8.59	0.83	1.24	1.75	0.90	0.79	2.40	1.36	4.28	1.99
40	Ix_AR2	ActiveIntronRegion	0	4.72	1.15	1.00	3.61	0.00	1.67	4.65	3.55	0.13	4.91	4.65	0.44	0.21	0.97	0.12	1.37	3.11	7.33	0.38	8.85	2.85	1.66	1.23	2.30	0.17	1.87	0.28	2.50	2.50
41	Ix_SR2	SilentIntronRegion	0	3.88	1.28	0.00	0.95	0.00	1.35	1.57	1.54	0.82	1.61	2.77	0.57	0.08	0.66	0.00	0.73	1.62	9.52	0.71	4.71	0.15	0.08	1.05	3.88	0.38	0.00	0.00	1.15	1.49
42	Ix_AR1	ActiveIntronRegion	0	5.49	0.00	0.29	1.24	0.00	1.35	2.08	1.59	0.34	0.58	2.62	0.00	0.89	1.06	0.00	1.02	2.54	3.34	0.64	3.53	0.37	1.09	0.16	1.01	0.74	0.27	0.00	2.53	2.12
43	ER4a	ExonRegion	0	156.68	48.17	177.75	57.32	0.00	35.72	152.49	244.86	31.86	146.03	180.27	76.41	47.31	17.43	38.38	28.36	100.25	56.95	5.13	269.35	24.35	30.66	71.66	41.65	14.90	34.64	29.37	147.18	158.79
44	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	1.39	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.25	0.00
45	E4a_E5a	KnownJunction	0	202.20	46.54	179.91	67.73	0.00	97.07	121.98	272.52	59.38	130.18	160.70	72.17	52.22	21.91	51.23	27.46	94.11	50.73	8.09	311.61	36.46	38.02	51.76	75.61	35.80	40.12	52.38	110.67	156.75
46	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	0.00	2.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER5a	ExonRegion	0	161.80	66.54	134.88	55.05	2.33	55.62	133.60	230.02	48.60	130.38	194.23	67.81	45.57	18.44	40.91	26.21	109.69	60.23	7.57	290.35	28.78	31.95	50.67	61.34	14.84	30.65	20.28	121.63	160.81
48	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	4.99	0.00	10.15	1.19	3.83	8.04	0.00	0.00	0.00	19.93	0.00	1.96	9.25	0.00	3.14	4.97	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
49	E5a_E6a	KnownJunction	0	91.25	72.23	92.33	58.88	0.00	44.28	78.67	101.02	45.13	126.39	208.25	41.87	41.75	13.38	33.49	30.22	85.58	94.01	16.18	236.35	23.10	16.34	25.07	48.45	12.92	27.72	4.77	61.02	94.45
50	Ix	Intron	0	2.94	1.92	1.36	0.80	0.00	1.58	0.52	1.52	0.41	3.71	2.47	1.43	0.14	0.68	0.99	1.20	4.81	2.75	0.20	1.80	0.65	0.22	0.20	1.12	0.14	0.31	0.00	2.52	0.63
51	Ix_SR3	SilentIntronRegion	0	0.00	3.71	0.00	0.00	0.00	3.52	0.00	0.00	0.00	1.74	1.13	0.00	0.00	0.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00
52	Ix_AR3	ActiveIntronRegion	0	4.76	2.11	2.68	0.00	0.00	1.03	1.51	2.57	1.01	6.75	3.30	2.22	0.12	1.02	3.09	2.09	10.55	5.42	0.53	3.70	0.53	0.17	0.17	0.81	0.34	0.99	0.00	3.20	1.25
53	Ix_AR2	ActiveIntronRegion	0	2.87	1.81	1.18	1.32	0.00	1.80	0.26	1.84	0.37	4.20	2.40	1.33	0.05	0.82	1.11	1.44	5.48	2.58	0.08	1.84	0.60	0.43	0.28	1.75	0.11	0.16	0.00	2.48	0.42
54	Ix_AR1	ActiveIntronRegion	0	0.67	3.02	0.52	0.00	0.00	1.72	1.26	0.58	0.88	2.26	2.61	0.96	0.00	0.99	0.00	1.34	1.87	1.21	0.00	2.35	1.34	0.00	0.00	0.67	0.45	0.49	0.00	1.53	1.47
55	E6_Aa	NovelBoundary	0	0.00	13.86	2.57	0.00	0.00	1.61	0.00	0.00	0.00	2.04	2.72	1.87	0.00	0.97	0.00	0.00	5.09	0.00	0.00	2.98	0.00	0.00	0.00	5.50	0.00	0.00	0.00	2.20	0.00
56	ER6a	ExonRegion	0	43.43	40.84	47.92	25.62	0.00	28.72	42.68	51.70	14.99	55.07	104.62	22.16	19.89	5.47	20.18	12.39	39.46	28.65	5.08	121.66	11.27	6.83	15.94	19.89	3.23	8.38	14.80	28.27	43.27
57	E6_Da	KnownBoundary	0	7.31	10.76	6.13	0.00	0.00	4.26	8.47	4.28	3.38	14.78	23.79	2.26	4.71	0.82	14.75	0.00	11.77	4.62	0.00	31.18	3.21	1.80	1.82	5.20	1.40	3.18	1.84	17.43	8.55
58	E6_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	E6_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	E6_Dd	KnownBoundary	0	2.42	0.00	5.53	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.42
61	ER6b	ExonRegion	0	6.43	16.42	12.34	7.31	0.00	9.62	14.11	9.21	2.25	14.44	22.61	7.42	1.30	1.81	0.00	0.00	13.02	21.83	4.53	44.97	1.43	1.80	5.42	2.15	0.00	1.57	1.83	16.30	9.40
62	ER6c	ExonRegion	0	6.43	13.14	11.22	3.66	0.00	8.94	14.11	3.68	2.25	9.38	16.07	7.42	1.30	1.36	0.00	0.00	12.02	13.65	0.00	46.38	1.43	1.80	6.33	2.15	0.00	1.57	1.83	16.30	8.72
63	ER6d	ExonRegion	0	6.43	8.76	8.60	0.00	0.00	5.50	9.41	1.84	0.37	7.22	13.88	4.95	1.30	0.30	0.00	0.00	8.35	7.28	0.00	30.92	1.43	1.80	5.42	0.00	0.00	1.57	1.83	15.21	6.71
64	ER6e	ExonRegion	0	1.28	0.98	2.00	0.00	0.00	0.10	1.73	0.88	0.17	0.78	2.20	0.14	0.01	0.13	0.00	0.00	1.92	0.57	0.00	6.59	0.02	2.23	1.59	0.32	0.00	0.70	0.54	1.18	0.84