Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CPT2	Gene	0	47.80	76.45	131.74	92.03	39.18	102.68	44.77	109.44	49.97	88.25	77.49	77.13	75.94	101.75	68.54	79.14	76.80	81.72	65.15	60.19	75.57	114.08	120.96	108.32	105.86	96.93	77.69	128.99	72.49
2	371486	Transcript	0	47.79	84.92	128.50	103.73	42.00	125.68	48.01	125.56	54.81	104.85	86.91	92.54	85.28	121.61	71.97	90.49	84.70	94.04	99.22	62.11	81.63	119.58	131.66	101.50	123.09	98.27	73.85	134.11	81.66
3	468572	Transcript	0	2.86	2.15	0.14	0.02	0.03	1.53	0.67	0.94	0.29	4.00	2.19	0.21	0.05	1.68	2.30	1.66	2.32	1.30	0.00	0.24	0.02	0.42	0.33	0.06	2.22	0.29	0.01	1.12	1.37
4	ER1a	ExonRegion	0	0.86	0.95	4.06	9.11	11.22	4.63	1.95	1.47	0.18	2.33	1.03	1.81	1.19	1.03	1.38	5.90	0.78	6.38	1.20	2.78	2.05	3.05	7.18	0.40	0.97	4.26	1.36	9.11	2.11
5	E1_Ab	KnownBoundary	0	24.54	13.77	99.14	101.59	103.45	85.48	48.17	13.64	4.14	61.28	17.27	24.43	25.06	20.72	24.72	81.09	41.06	61.13	24.28	11.25	55.35	61.79	95.40	2.99	23.87	66.35	31.21	130.53	45.10
6	ER1b	ExonRegion	0	18.79	13.59	21.76	13.51	18.24	48.39	21.41	20.70	7.24	40.70	21.84	19.54	21.02	35.84	9.07	46.35	24.12	53.87	24.36	28.04	31.89	45.18	51.65	19.15	32.17	39.34	14.76	48.80	29.35
7	E1a_E2a	KnownJunction	0	40.11	89.58	36.80	20.28	47.90	153.97	64.19	78.53	32.95	128.70	104.36	77.02	98.37	161.26	54.61	120.26	86.35	117.51	88.79	63.02	120.53	79.34	167.20	99.71	160.14	118.66	67.59	153.04	97.39
8	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.58
9	E2_Aa	NovelBoundary	0	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.04	0.00	1.20	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.49	5.41
10	ER2a	ExonRegion	0	67.82	98.39	113.12	75.83	43.48	156.10	56.47	121.15	32.48	115.06	131.21	82.05	84.05	168.70	29.66	118.10	87.03	106.61	68.33	92.47	119.69	141.44	155.69	173.05	180.91	95.91	127.14	129.07	87.44
11	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	1.40	0.00	0.00	1.54	0.00	2.13	8.37	0.00	2.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	98.98	114.01	192.59	184.20	45.39	168.13	58.30	98.59	40.81	135.85	142.20	86.26	72.45	155.18	49.03	160.65	82.14	120.72	129.48	102.63	127.31	168.95	123.86	154.20	117.10	94.02	124.49	132.82	101.48
13	E2a_E4a	NovelJunction	0	0.00	0.00	4.61	0.00	7.37	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	1.68	0.00	0.00	0.00	1.13	0.00	0.00	2.45	0.00	0.00	3.31	0.00	0.00	2.31	0.00	0.00	4.29	0.00	2.11	0.00
16	ER3a	ExonRegion	0	122.00	146.65	194.92	164.84	84.03	295.88	73.89	172.84	53.84	200.45	167.12	124.34	144.42	270.28	68.62	171.00	112.65	142.99	109.38	147.68	172.27	249.77	236.58	213.99	251.15	146.84	126.50	197.86	143.86
17	E3_Da	KnownBoundary	0	0.00	0.00	1.54	0.00	0.00	1.92	0.00	0.00	0.00	3.56	0.00	0.00	0.00	0.00	0.00	0.00	1.26	0.00	0.00	4.13	0.00	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E3a_E4a	KnownJunction	0	96.68	147.95	152.63	179.89	58.36	311.16	83.30	210.21	57.07	227.89	205.88	146.23	122.12	239.27	105.44	167.99	143.77	178.39	250.87	114.54	169.47	186.98	244.92	152.95	273.53	122.09	123.25	203.58	125.81
19	ER3b	ExonRegion	0	2.86	2.15	0.14	0.02	0.03	1.53	0.67	0.94	0.29	4.00	2.19	0.21	0.05	1.68	2.30	1.66	2.32	1.30	0.00	0.24	0.02	0.42	0.33	0.06	2.22	0.29	0.01	1.12	1.37
20	E3_Db	NovelBoundary	0	11.33	0.00	1.52	0.00	0.00	1.69	0.00	2.54	1.22	3.91	0.00	0.00	0.00	2.06	0.00	0.00	4.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.59	3.78	0.00	0.00	1.32
21	E4_Aa	NovelBoundary	0	0.00	3.59	0.00	0.00	0.00	8.86	0.00	0.00	2.86	1.88	3.80	0.00	0.00	6.18	0.00	0.00	4.77	4.62	8.09	0.00	0.00	0.00	0.00	10.59	1.86	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	80.95	118.47	223.97	155.24	63.06	163.61	68.38	184.84	64.44	143.22	135.48	138.78	120.22	175.29	82.19	126.95	139.62	135.75	102.38	93.53	121.95	199.36	211.66	174.94	178.97	167.94	127.29	226.61	117.20
23	E4_Da	NovelBoundary	0	5.72	0.00	2.79	0.00	0.00	0.00	5.21	0.00	8.86	0.00	0.00	1.54	5.73	8.44	45.05	3.06	13.30	0.00	0.00	3.89	0.00	2.48	0.00	8.19	8.26	7.77	0.00	4.45	0.00
24	E4a_E5a	KnownJunction	0	25.48	74.26	134.62	89.30	45.98	65.99	38.85	127.55	71.47	75.18	36.54	116.14	104.04	122.55	50.23	85.60	82.45	84.38	72.61	44.57	49.01	125.48	106.87	73.75	80.35	115.87	42.19	128.95	95.87
25	Ix	Intron	0	7.22	5.73	2.71	9.76	4.11	5.17	3.14	6.32	6.83	5.71	1.62	3.56	3.74	6.95	18.47	13.76	15.77	9.59	9.52	7.02	3.88	1.17	2.23	8.50	4.91	6.82	3.80	6.55	5.11
26	Ix_SR1	SilentIntronRegion	0	6.88	1.65	4.11	9.48	3.69	5.19	1.52	6.96	6.45	2.73	1.57	1.40	3.80	5.47	18.75	8.30	15.79	9.58	9.66	6.10	1.08	1.02	1.02	7.31	4.05	8.02	4.15	9.24	4.55
27	Ix_AR1	ActiveIntronRegion	0	7.43	7.88	1.99	9.94	4.35	5.17	3.99	6.02	7.06	7.30	1.65	4.70	3.72	7.75	18.40	16.68	15.82	9.63	9.49	7.53	5.37	1.25	2.87	9.16	5.38	6.23	3.63	5.17	5.43
28	E5_Aa	NovelBoundary	0	10.15	4.46	4.73	17.90	7.22	5.26	8.24	15.88	4.20	9.19	5.60	8.49	14.17	16.82	32.69	10.86	34.84	9.25	16.18	3.80	8.50	2.43	4.73	20.04	5.46	10.08	0.00	8.36	6.27
29	ER5a	ExonRegion	0	34.99	82.96	127.23	85.11	31.37	82.99	47.58	103.72	80.92	75.61	55.63	59.75	78.84	69.92	120.62	66.00	56.90	65.28	69.04	55.12	65.65	83.01	87.65	105.43	81.63	81.19	75.19	102.31	67.29