Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C1orf122	Gene	0	70.46	47.37	59.59	41.96	24.67	46.35	53.17	20.54	29.65	36.67	19.26	29.60	40.53	61.43	72.38	49.23	32.14	59.52	39.73	75.28	29.61	121.04	56.26	51.29	56.92	57.27	26.58	38.94	34.38
2	373043	Transcript	0	3.03	1.25	4.73	4.57	1.35	1.90	0.93	0.51	0.94	1.79	0.60	1.29	0.89	2.03	9.36	3.64	5.26	5.62	1.04	3.51	0.76	4.39	2.22	2.53	1.41	2.76	0.55	3.51	0.91
3	468084	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	419397	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	446260	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	373042	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	2.25	0.85	1.11	0.95	0.00	0.73	0.27	0.61	0.47	1.34	0.69	1.02	0.13	1.55	2.59	1.86	1.94	0.62	1.48	1.46	1.04	0.24	0.48	0.57	1.57	1.26	0.36	2.16	0.09
8	E1_Ab	KnownBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	1.49	0.00	0.00	1.11	8.37	3.21	1.40	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.89	6.18	0.00	0.00	0.00
9	ER1b	ExonRegion	0	4.49	0.00	0.00	0.00	5.26	0.00	2.24	2.18	1.27	0.00	0.33	1.08	0.00	1.48	3.63	5.62	1.28	3.89	2.18	1.87	1.64	5.81	0.87	0.00	2.36	7.68	0.00	7.18	2.31
10	E1_Ac	KnownBoundary	0	66.95	3.88	45.42	34.51	85.18	20.99	94.06	60.76	15.87	31.92	40.87	47.08	40.51	24.86	54.81	25.17	30.95	4.88	0.00	45.07	29.52	54.11	44.87	14.24	18.72	40.43	9.69	35.77	20.04
11	ER1c	ExonRegion	0	9.53	2.72	3.11	0.00	2.66	4.12	7.07	2.02	0.67	1.82	1.29	3.03	1.24	5.69	5.44	7.15	2.91	7.36	3.12	7.17	3.99	13.33	10.84	2.14	3.62	6.92	0.56	4.89	2.10
12	E1_Ad	KnownBoundary	0	44.42	3.97	35.53	59.75	110.82	18.34	36.10	7.02	3.23	9.59	10.34	18.79	13.37	25.10	24.91	14.15	14.50	32.36	8.09	15.55	14.64	54.45	39.79	16.51	6.59	32.92	2.39	25.25	11.32
13	ER1d	ExonRegion	0	82.32	19.75	97.81	45.61	30.51	32.95	46.98	14.60	19.21	29.26	9.63	26.40	26.13	43.65	38.71	48.87	22.21	53.15	27.69	46.18	29.95	110.94	81.77	34.40	39.01	48.37	18.45	48.15	30.28
14	E1_Da	KnownBoundary	0	3.01	0.00	2.39	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	3.03	1.86	9.97	0.00	1.31	4.62	0.00	7.36	1.56	2.48	0.00	0.00	1.93	1.67	0.00	0.00	0.00
15	E1a_E1e	KnownJunction	0	165.45	31.61	210.53	228.20	114.07	51.37	112.37	38.92	36.60	71.74	23.50	57.38	70.03	62.30	131.35	108.25	52.63	89.39	64.51	116.61	38.43	231.37	108.55	75.91	77.78	99.22	95.97	86.72	74.71
16	ER1e	ExonRegion	0	10.93	4.92	18.10	17.81	14.91	9.30	4.41	0.03	4.41	9.31	0.91	6.91	9.28	6.87	18.53	7.67	11.18	18.55	4.90	16.42	3.53	29.28	11.46	5.90	4.80	31.62	5.62	11.31	7.78
17	E1_Db	KnownBoundary	0	3.01	0.00	8.05	18.55	0.00	3.68	0.00	0.00	0.00	0.00	0.00	1.69	0.00	1.13	15.75	3.82	7.90	9.25	0.00	7.11	0.00	0.00	0.00	2.93	0.00	0.00	0.00	1.80	3.33
18	E1b_E1e	KnownJunction	0	8.08	0.00	8.25	0.00	6.34	3.15	2.92	0.00	2.95	0.00	0.00	8.58	5.92	3.23	7.37	6.58	2.59	9.76	0.00	10.50	2.05	22.80	14.23	8.31	3.41	10.47	0.00	4.40	4.09
19	ER1f	ExonRegion	0	3.80	1.64	8.34	8.19	2.71	3.08	1.60	0.40	1.42	2.24	0.52	1.56	1.65	2.51	16.13	5.42	8.59	10.62	0.59	5.56	0.48	8.54	3.95	4.49	1.24	4.25	0.74	4.85	1.74
20	E1_Ae	KnownBoundary	0	8.08	4.85	7.87	0.00	18.27	5.45	4.81	0.00	2.95	3.83	2.91	1.48	1.34	6.76	7.57	9.79	10.62	9.50	0.00	7.03	2.05	11.08	13.99	2.27	3.33	2.19	0.00	8.18	3.10
21	ER1g	ExonRegion	0	128.83	43.96	85.19	66.00	28.75	59.23	105.61	26.71	29.16	49.33	15.10	41.86	51.76	73.81	79.61	99.13	43.14	134.46	57.87	122.97	42.77	212.11	119.84	57.29	46.19	100.87	25.61	77.21	51.68
22	E1_Dc	NovelBoundary	0	0.00	0.00	1.49	0.00	0.00	0.00	0.00	1.84	1.55	0.00	0.00	0.00	0.00	0.00	9.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E1c_E2a	KnownJunction	0	169.52	61.08	101.85	9.49	46.42	63.34	137.14	16.47	55.39	88.28	19.46	64.49	93.97	96.38	159.46	168.91	82.72	158.74	88.79	135.46	33.01	225.24	196.70	52.04	47.58	182.94	33.20	103.61	75.57
24	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	5.24	0.00	0.00	0.00	0.00	0.86	0.00	0.00	1.31	4.62	0.00	4.13	2.05	3.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER2a	ExonRegion	0	235.23	193.19	201.30	146.45	86.62	175.19	182.98	77.94	118.27	135.80	78.87	106.83	156.61	234.74	277.79	161.73	115.71	191.79	147.21	274.20	105.65	423.32	174.33	201.26	229.00	193.52	105.75	122.72	125.73
26	ER2b	ExonRegion	0	12.15	26.28	18.33	17.06	21.59	10.08	6.05	1.23	2.25	2.89	2.38	5.36	3.46	13.00	42.94	7.59	10.02	14.56	10.56	10.31	3.80	17.43	4.82	8.60	10.48	9.95	3.66	11.41	5.82
27	ER2c	ExonRegion	0	2.14	8.21	3.93	7.31	2.49	4.12	1.01	0.00	1.12	0.00	1.19	2.47	0.65	6.35	16.80	2.53	1.50	4.09	6.79	0.00	2.14	8.11	2.71	2.15	0.71	3.14	0.00	3.26	1.34
28	IG50	Intergenic	0	1.79	1.35	0.70	0.00	0.00	1.15	2.53	0.77	0.94	1.21	0.50	2.06	4.60	0.76	4.22	1.78	0.62	1.61	2.67	2.30	1.19	2.26	0.76	0.00	2.39	1.31	3.83	0.00	1.68
29	IG50_SR1	SilentIntergenicRegion	0	1.68	2.02	0.67	0.00	0.00	1.29	2.70	0.11	1.76	1.84	0.86	1.08	6.34	0.07	0.00	1.79	0.31	1.51	2.16	1.56	0.13	2.91	1.34	0.00	2.40	1.52	4.37	0.00	1.57
30	IG50_SR2	SilentIntergenicRegion	0	2.14	0.40	0.88	0.00	0.00	1.17	2.51	1.84	0.00	0.32	0.00	3.50	3.01	1.81	10.93	2.16	1.00	2.26	3.42	3.70	2.85	1.67	0.00	0.00	2.79	1.30	3.35	0.00	2.03
31	IG50_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00	0.00	0.00	2.06	0.00	0.81	3.73	0.00	1.00	0.61	0.00	0.00	0.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00