Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	IQCC	Gene	0	33.55	13.72	17.75	53.03	8.11	11.59	32.26	21.96	12.36	20.60	10.42	8.71	10.30	9.85	23.36	29.06	20.58	25.96	44.93	23.10	15.14	13.47	17.11	13.53	11.97	12.26	16.50	10.62	8.68
2	291358	Transcript	0	30.13	10.10	16.78	91.45	10.90	11.96	33.62	22.17	10.84	19.06	12.05	7.36	9.84	6.13	14.36	22.64	18.25	27.43	35.98	24.38	16.18	14.21	18.80	9.91	12.31	14.42	15.61	8.47	8.31
3	ER1a	ExonRegion	0	4.59	3.28	12.09	83.81	15.50	10.30	14.37	5.26	2.92	9.65	11.56	3.65	7.30	2.00	1.78	3.41	8.65	6.41	11.28	8.92	9.74	8.96	11.14	0.27	7.42	10.30	12.41	2.48	7.07
4	E1_Da	NovelBoundary	0	17.22	8.43	5.68	9.27	0.00	3.49	7.84	2.04	2.89	1.72	0.00	1.42	0.00	8.02	18.34	41.39	20.84	9.25	24.28	7.28	11.31	0.00	0.00	2.69	3.18	6.05	6.41	2.29	0.00
5	E1a_E2a	KnownJunction	0	8.14	4.27	26.04	192.83	36.70	15.81	23.29	13.88	4.48	26.88	24.04	7.38	6.21	1.86	8.37	3.52	22.35	13.87	8.09	7.77	27.44	6.32	15.46	4.73	13.94	22.36	30.86	1.66	7.86
6	Ix	Intron	0	16.27	1.38	2.63	8.22	2.10	2.95	3.47	0.00	1.04	2.28	0.34	0.62	0.00	4.15	7.65	11.99	19.03	6.07	6.87	5.31	3.07	0.77	0.00	3.39	1.43	1.58	1.05	4.90	0.00
7	Ix_AR1	ActiveIntronRegion	0	16.36	1.39	2.65	8.26	2.11	2.97	3.48	0.00	1.05	2.29	0.34	0.62	0.00	4.18	7.69	12.05	19.13	6.11	6.90	5.34	3.08	0.78	0.00	3.41	1.44	1.58	1.06	4.93	0.00
8	E2_Aa	NovelBoundary	0	29.32	4.27	4.09	10.78	0.00	5.56	2.40	2.44	1.77	5.47	0.00	0.00	3.57	4.36	18.34	38.86	14.45	4.62	8.09	4.13	3.73	2.33	0.00	5.14	7.39	0.00	0.00	12.94	0.00
9	ER2a	ExonRegion	0	7.40	1.48	8.97	32.04	3.60	4.68	7.00	5.75	2.81	5.65	4.39	1.46	2.11	1.01	2.92	4.22	8.72	4.74	7.35	5.72	7.42	6.81	5.96	2.24	4.06	7.05	4.87	2.07	1.58
10	E2_Da	NovelBoundary	0	21.29	4.85	3.09	20.06	0.00	5.33	2.63	6.87	5.91	3.60	0.00	1.36	0.00	5.25	0.00	15.91	20.66	4.62	16.18	8.27	5.78	2.24	0.00	0.00	0.00	0.00	0.00	1.93	2.71
11	E2a_E3a	KnownJunction	0	22.47	4.85	0.00	0.00	0.00	19.84	24.32	21.50	11.79	16.06	12.31	0.00	10.95	2.79	0.00	3.82	10.44	18.37	48.55	13.48	28.60	19.64	11.67	6.10	17.54	19.57	9.34	8.45	3.04
12	Ix	Intron	0	3.60	1.80	0.00	4.02	0.00	1.54	2.26	0.00	0.94	3.24	0.00	0.00	0.00	0.51	7.75	11.12	5.86	5.40	3.58	0.00	0.00	0.00	0.00	1.21	0.80	0.00	0.00	2.74	0.00
13	Ix_AR1	ActiveIntronRegion	0	3.68	1.81	0.00	4.11	0.00	1.58	2.31	0.00	0.96	3.29	0.00	0.00	0.00	0.52	7.93	11.37	5.99	5.49	3.66	0.00	0.00	0.00	0.00	1.23	0.82	0.00	0.00	2.80	0.00
14	E3_Aa	NovelBoundary	0	13.45	0.00	2.59	30.63	0.00	0.00	0.00	6.27	1.55	5.83	0.00	4.94	0.00	3.61	0.00	11.02	8.04	4.62	0.00	4.13	0.00	0.00	6.01	3.05	1.89	0.00	0.00	2.29	2.74
15	ER3a	ExonRegion	0	45.79	20.36	21.33	66.85	8.27	8.67	33.46	31.67	11.99	18.61	9.93	7.84	10.10	9.33	24.53	27.11	24.54	35.80	37.98	30.26	13.72	16.65	25.23	15.30	12.36	18.32	13.75	7.68	7.83
16	E3_Da	NovelBoundary	0	6.02	3.59	2.52	0.00	0.00	1.88	2.69	2.44	2.80	1.92	0.00	0.00	0.00	5.63	9.17	3.82	15.96	0.00	0.00	0.00	3.45	2.43	0.00	2.45	3.33	0.00	0.00	2.07	1.78
17	E3a_E4a	KnownJunction	0	77.03	21.14	33.88	245.03	22.11	10.78	63.97	51.56	23.57	23.93	5.41	12.53	20.54	10.52	35.28	51.48	26.76	69.61	64.51	73.27	15.60	26.20	31.42	14.36	14.32	17.77	2.19	19.50	22.12
18	I3	Intron	0	7.86	0.00	1.23	15.78	0.00	0.00	0.74	0.68	1.03	1.06	2.62	0.45	0.00	2.33	3.71	6.12	9.32	5.89	4.69	1.01	1.57	0.66	1.33	2.37	2.62	1.15	0.00	4.78	0.73
19	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.30	0.00	2.53	2.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	I3_SR1	SilentIntronRegion	0	8.16	0.00	1.27	16.37	0.00	0.00	0.77	0.70	1.06	1.10	2.72	0.47	0.00	2.41	3.85	6.29	9.61	6.11	4.83	1.05	1.63	0.69	1.38	2.46	2.72	1.20	0.00	4.96	0.76
21	E4_Aa	NovelBoundary	0	0.00	0.00	3.84	0.00	0.00	8.86	0.00	4.23	0.00	5.83	1.58	0.00	1.27	3.04	0.00	14.15	21.43	19.26	0.00	0.00	7.26	0.00	2.31	10.53	1.44	0.00	0.00	2.25	0.00
22	ER4a	ExonRegion	0	38.60	12.92	17.52	59.61	3.35	9.05	45.50	23.92	11.74	18.34	7.93	12.16	12.82	9.88	20.00	30.92	21.46	29.03	46.21	30.66	10.14	13.47	32.29	14.86	7.27	9.23	13.54	9.51	10.84
23	E4_Da	NovelBoundary	0	11.68	0.00	1.40	8.84	0.00	0.00	2.52	0.00	1.74	0.00	3.01	0.00	0.00	0.86	7.97	7.65	11.95	10.02	16.18	0.00	2.05	0.00	2.31	5.92	0.00	0.00	0.00	0.00	0.00
24	E4a_E5a	KnownJunction	0	32.27	8.34	12.91	92.10	0.00	15.50	56.47	23.54	14.46	29.32	21.61	11.66	7.48	6.65	9.97	46.43	19.81	42.13	48.55	25.80	16.20	16.04	20.19	16.51	20.65	13.13	34.94	12.40	5.05
25	I4	Intron	0	7.35	0.00	1.43	9.22	0.00	4.71	0.00	0.00	0.96	1.86	0.51	0.00	0.00	0.78	3.95	12.46	3.84	3.44	2.74	0.00	3.06	0.00	0.00	4.61	3.68	1.35	2.35	4.19	0.00
26	I4_SR1	SilentIntronRegion	0	7.47	0.00	1.46	9.38	0.00	4.79	0.00	0.00	0.98	1.89	0.52	0.00	0.00	0.79	4.02	12.68	3.90	3.50	2.79	0.00	3.11	0.00	0.00	4.69	3.74	1.37	2.40	4.26	0.00
27	E5_Aa	NovelBoundary	0	2.36	0.00	2.32	10.78	0.00	5.72	0.00	0.00	3.23	4.07	0.00	0.00	0.00	2.30	0.00	3.75	6.98	4.62	24.28	0.00	0.00	0.00	0.00	2.81	0.00	2.19	0.00	0.00	0.00
28	ER5a	ExonRegion	0	34.86	14.30	18.27	50.82	8.60	13.05	34.25	22.44	13.84	23.10	11.26	9.51	11.07	11.16	26.41	32.83	21.52	26.94	51.24	23.57	16.81	13.77	15.81	14.81	13.28	12.05	18.56	12.44	9.43
29	IG14	Intergenic	0	3.77	0.40	0.63	0.90	0.61	3.11	2.53	1.39	0.71	2.72	0.45	0.78	0.00	3.01	0.58	2.63	10.31	6.53	4.01	2.92	4.66	0.23	0.45	0.54	1.26	0.99	0.23	3.69	0.34
30	IG14_SR1	SilentIntergenicRegion	0	3.79	0.41	0.63	0.91	0.62	3.12	2.54	1.39	0.71	2.73	0.45	0.78	0.00	3.02	0.58	2.64	10.36	6.57	4.03	2.94	4.68	0.23	0.46	0.54	1.26	0.99	0.23	3.70	0.34