Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM76A	Gene	0	64.50	41.78	29.81	83.61	34.84	50.15	79.56	33.27	35.97	39.92	40.68	16.92	33.74	51.12	53.55	24.73	47.74	34.11	105.69	50.62	24.48	18.12	26.82	43.36	45.67	41.51	42.77	20.12	9.64
2	373948	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	419687	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.08	0.00	0.00	2.26	0.00	0.00	1.15	0.00	8.09	0.00	0.00	2.48	0.00	0.00	0.00	0.00	4.17	1.80	0.00
4	373954	Transcript	0	3.16	20.17	0.83	13.56	6.72	15.48	17.01	4.51	29.93	8.79	6.09	7.28	7.86	14.17	52.76	14.04	13.79	12.46	62.00	24.26	7.19	2.27	2.70	17.25	6.01	5.40	10.52	2.18	2.63
5	234549	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	373949	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	10299	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	446647	Transcript	0	21.68	12.30	2.17	27.83	1.93	10.93	15.67	5.59	4.23	7.91	3.05	1.71	3.80	14.29	10.16	3.67	19.44	9.29	32.10	10.55	8.75	5.39	3.34	9.54	14.58	12.57	12.31	1.93	0.69
9	ER1a	ExonRegion	0	11.87	2.69	0.00	17.70	13.05	3.79	10.56	6.66	0.00	3.23	1.98	2.15	4.23	0.60	9.19	0.00	0.00	5.79	3.26	4.50	4.08	4.47	1.30	0.00	2.86	8.46	7.22	7.20	2.34
10	E1_Ab	KnownBoundary	0	15.45	7.56	2.24	36.45	6.78	1.65	11.84	6.32	1.40	7.15	2.50	5.09	6.72	2.08	0.00	0.00	9.30	0.00	0.00	10.92	1.56	5.93	4.09	0.00	0.00	20.34	0.00	10.83	3.86
11	E1_Ac	KnownBoundary	0	12.56	0.00	7.65	94.26	31.98	8.67	37.99	0.00	1.28	11.90	4.14	2.53	2.87	1.95	0.00	9.72	11.88	28.51	16.18	14.72	3.49	4.47	1.87	0.00	0.00	16.48	0.00	9.57	1.55
12	ER1b	ExonRegion	0	9.83	1.02	1.66	40.35	14.77	4.55	13.97	1.46	0.00	5.23	1.35	1.66	2.11	1.38	0.39	2.36	2.04	9.60	3.12	4.56	1.97	2.86	2.00	0.00	0.10	9.38	0.44	2.70	1.48
13	ER1c	ExonRegion	0	23.93	7.04	11.94	80.02	11.16	9.95	31.83	12.53	5.09	13.67	4.60	11.31	10.69	12.76	9.64	10.88	20.61	15.85	16.28	16.32	3.98	9.26	7.02	5.07	7.42	31.58	5.97	10.30	4.58
14	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E1a_E2a	KnownJunction	0	70.90	14.06	4.21	37.75	0.00	19.84	52.41	18.56	9.47	26.28	21.45	9.25	25.28	23.91	16.34	9.94	20.01	23.12	0.00	41.60	8.82	18.33	9.11	5.74	12.01	29.83	5.02	13.08	1.32
16	ER2a	ExonRegion	0	179.69	25.32	6.54	33.41	4.60	57.25	83.98	71.86	23.61	40.85	24.63	18.31	30.44	63.35	22.40	29.55	49.61	49.29	61.06	65.34	22.16	55.00	19.70	23.83	45.74	60.37	14.79	14.09	6.81
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.35	4.33	0.00	2.00	0.00	0.00	0.00	2.97	0.00	7.65	4.84	5.14	0.00	0.00	0.00	0.00	2.17	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E4a	KnownJunction	0	234.64	35.77	10.14	34.73	20.19	73.93	151.05	75.84	44.28	52.13	31.92	27.05	44.68	87.98	40.66	39.01	73.43	84.25	169.94	104.86	28.04	60.63	42.26	48.81	71.03	115.27	2.39	29.03	17.20
19	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3_Aa	NovelBoundary	1	190.29	167.24	332.49	91.24	249.50	246.01	120.49	148.90	487.30	300.71	109.93	234.97	218.58	264.73	163.24	171.82	733.28	0.00	0.00	100.89	253.58	131.17	128.00	184.77	163.17	388.80	220.61	252.96	337.27
21	ER3a	ExonRegion	0	16.14	14.04	1.33	7.17	4.88	13.73	9.76	14.89	9.55	16.18	5.36	8.33	2.60	11.74	23.94	18.53	7.88	9.71	3.19	10.66	16.38	2.70	9.04	18.33	11.43	15.64	0.92	20.36	4.36
22	E3_Da	NovelBoundary	0	5.90	0.00	2.94	9.06	0.00	0.00	9.96	7.42	19.00	3.99	1.30	4.52	1.88	3.17	0.00	3.44	12.49	4.62	0.00	3.47	7.62	2.48	0.00	5.98	10.87	0.00	17.05	9.35	5.28
23	E3a_E4a	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	4.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00
25	ER4a	ExonRegion	0	172.45	31.18	20.36	36.43	21.10	68.11	262.63	73.94	38.44	96.02	96.83	43.13	73.57	109.80	39.31	49.60	94.69	86.04	131.50	93.72	30.68	32.38	64.64	41.42	76.40	228.26	50.88	86.60	15.54
26	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
27	E4a_E5a	KnownJunction	0	149.71	40.04	31.17	60.61	26.67	49.30	90.63	65.39	10.66	61.36	96.36	40.18	55.12	93.57	53.62	25.86	89.79	65.50	105.20	106.68	17.89	24.55	44.23	48.99	49.89	138.23	67.89	42.73	5.02
28	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.08	0.00	0.00	2.26	0.00	0.00	1.15	0.00	8.09	0.00	0.00	2.48	0.00	0.00	0.00	0.00	4.17	1.80	0.00
29	E5_Aa	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.43	0.00	5.44	0.00	0.00	1.04	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	5.68	0.00	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	197.58	28.81	84.79	222.77	62.68	72.42	127.49	82.99	24.00	66.20	73.69	27.71	46.05	112.57	39.39	31.66	101.68	63.73	132.64	101.88	26.68	40.43	41.18	56.59	87.20	89.88	44.29	36.66	4.88
31	E5_Da	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	2.24	3.26	0.00	10.53	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	4.40	0.00
32	E5a_E6a	KnownJunction	0	236.83	43.34	58.92	232.95	49.07	69.94	101.84	75.15	22.90	62.87	75.01	28.28	46.91	101.61	33.69	61.50	85.06	55.48	72.83	81.87	27.68	37.00	43.88	46.24	75.85	95.14	20.43	16.13	5.05
33	E5a_E7a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.44	0.00	0.00	0.00
35	ER6a	ExonRegion	0	202.51	60.70	74.69	235.46	43.68	80.08	131.84	83.12	24.49	58.98	84.22	27.35	51.43	90.92	38.19	35.47	101.84	59.95	134.58	76.82	32.41	38.56	61.53	41.76	75.97	88.57	61.33	39.13	10.09
36	E6_Ab	KnownBoundary	0	183.62	41.98	74.22	141.06	6.93	91.08	112.48	86.54	33.89	58.60	50.93	35.09	47.42	83.44	26.31	26.32	146.60	46.23	129.25	88.57	40.83	18.04	40.19	45.10	81.57	53.21	20.57	55.54	4.56
37	ER6b	ExonRegion	0	122.41	48.47	66.54	122.34	9.96	69.59	107.87	65.88	30.64	43.47	39.85	30.75	49.15	77.96	32.39	39.60	131.96	62.92	103.48	56.67	40.02	25.29	44.38	19.88	50.37	50.72	41.28	29.08	9.21
38	E6a_E7a	KnownJunction	0	40.58	38.10	46.24	113.45	24.46	42.59	89.77	48.42	33.01	36.83	21.83	15.78	28.09	48.81	50.43	47.35	92.29	36.99	48.55	19.27	27.72	28.64	34.62	12.74	24.70	29.31	55.26	18.38	5.78
39	E6a_E8a	KnownJunction	0	47.37	16.09	14.60	0.00	0.00	18.45	12.82	20.85	7.58	9.07	16.10	5.69	21.14	19.41	16.34	13.69	32.44	9.25	24.28	36.06	16.81	9.24	18.12	2.39	13.98	25.10	18.84	6.25	7.89
40	E6a_E9a	NovelJunction	0	2.36	0.00	0.00	9.92	0.00	0.00	0.00	0.00	0.00	0.00	10.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E7_Aa	NovelBoundary	0	0.00	4.07	3.01	10.78	0.00	3.91	0.00	0.00	4.29	2.04	2.88	0.00	0.00	1.11	0.00	0.00	2.27	4.75	0.00	0.00	3.13	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00
42	ER7a	ExonRegion	0	128.46	66.91	61.92	107.84	39.17	73.90	138.11	74.51	25.04	71.44	87.66	24.65	45.72	75.14	61.67	45.32	111.71	49.75	177.86	64.06	32.99	37.32	53.44	40.70	72.90	86.19	72.12	37.92	12.19
43	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E7a_E8a	KnownJunction	0	197.13	89.00	71.33	184.63	27.85	129.84	145.90	91.42	36.39	91.28	60.68	28.92	50.31	94.50	34.08	26.93	139.06	76.42	161.85	65.83	46.89	30.19	79.34	25.24	95.70	120.29	32.25	41.65	20.73
45	E8_Aa	NovelBoundary	0	2.71	4.27	2.42	0.00	0.00	0.00	0.00	0.00	0.00	3.04	0.00	0.00	1.18	2.17	0.00	0.00	2.09	0.00	8.09	0.00	6.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER8a	ExonRegion	0	189.95	77.29	86.28	206.31	45.82	102.40	169.46	81.86	35.99	78.93	75.83	29.33	63.12	116.44	52.88	40.16	112.78	54.40	132.21	106.47	50.11	37.00	70.15	61.29	91.44	100.12	66.54	53.46	21.59
47	E8_Da	NovelBoundary	0	0.00	0.00	1.22	9.49	6.78	0.00	0.00	0.00	0.00	5.31	0.00	0.00	0.00	0.00	0.00	0.00	8.35	4.62	8.09	0.00	2.05	0.00	0.00	5.02	0.00	6.05	7.01	1.71	0.00
48	E8a_E9a	KnownJunction	0	228.80	134.57	99.78	390.40	40.38	92.85	218.73	130.59	35.57	87.56	98.10	32.65	77.67	130.95	125.37	61.12	116.13	74.49	153.53	133.89	52.30	36.71	63.29	48.51	120.74	102.31	84.24	51.67	17.43
49	E9_Aa	NovelBoundary	0	3.01	0.00	1.02	21.35	0.00	3.49	0.00	5.08	0.00	5.15	5.57	1.87	1.97	2.26	7.97	0.00	8.64	0.00	0.00	0.00	13.68	0.00	0.00	0.00	0.00	2.19	0.00	0.00	1.35
50	ER9a	ExonRegion	0	183.65	65.79	107.16	278.67	91.28	105.63	167.41	92.65	36.54	84.93	100.60	29.60	82.70	124.55	59.52	39.42	101.43	68.82	192.84	113.89	52.72	43.37	79.46	59.68	106.58	123.25	99.96	50.48	28.70
51	E9_Da	NovelBoundary	0	24.07	0.00	5.93	19.41	5.60	8.25	5.03	1.84	0.00	9.23	7.21	1.42	3.53	22.67	9.17	10.48	15.67	4.62	32.37	19.52	6.62	1.85	7.24	17.94	8.90	3.95	2.14	4.45	0.00
52	E9a_E10a	KnownJunction	0	17.70	0.00	6.55	0.00	0.00	1.50	0.00	4.58	0.00	2.04	1.52	1.39	6.78	4.25	0.00	10.56	0.00	0.00	0.00	0.00	0.00	2.33	6.94	0.00	10.99	5.06	6.41	0.00	0.00
53	E9a_E11a	KnownJunction	0	96.21	63.79	83.22	298.95	116.72	37.98	106.08	49.27	33.13	65.99	20.06	24.64	45.73	60.51	24.52	34.88	41.51	27.74	105.20	65.33	22.26	31.31	24.23	44.98	64.06	66.56	31.46	17.34	20.93
54	I9	Intron	0	5.89	7.23	0.00	2.81	1.92	1.62	2.37	3.61	1.54	4.53	2.80	0.72	0.00	6.22	9.05	13.78	4.68	6.80	11.28	2.16	2.80	2.83	2.84	2.53	3.36	4.32	2.87	0.64	0.00
55	I9_AR1	ActiveIntronRegion	0	6.03	7.40	0.00	2.88	1.96	1.66	2.43	3.70	1.57	4.64	2.87	0.74	0.00	6.36	9.26	14.09	4.80	6.96	11.47	2.21	2.86	2.90	2.90	2.59	3.44	4.42	2.94	0.65	0.00
56	E10_Aa	NovelBoundary	0	13.57	17.84	2.39	9.27	0.00	9.09	2.92	0.00	13.34	5.27	0.00	0.00	2.96	21.23	16.74	17.52	13.26	9.25	80.92	8.27	5.70	7.44	2.51	8.25	13.87	0.00	7.85	2.29	0.00
57	ER10a	ExonRegion	0	30.74	17.88	7.56	44.69	2.52	9.01	16.96	3.85	10.16	7.88	7.87	1.51	8.67	14.93	16.18	12.27	13.87	11.72	25.65	11.02	6.31	8.30	8.90	10.80	10.34	16.27	4.44	10.08	2.21
58	E10_Da	KnownBoundary	0	63.11	56.81	30.42	17.90	18.57	54.10	52.12	46.43	104.15	120.68	71.43	57.65	43.40	56.30	102.65	69.23	101.16	50.99	15.96	47.97	95.22	29.36	49.20	128.60	70.88	75.14	48.85	58.95	36.48
59	ER10b	ExonRegion	0	21.68	12.30	2.17	27.83	1.93	10.93	15.67	5.59	4.23	7.91	3.05	1.71	3.80	14.29	10.16	3.67	19.44	9.29	32.10	10.55	8.75	5.39	3.34	9.54	14.58	12.57	12.31	1.93	0.69
60	E10_Db	NovelBoundary	0	6.02	11.63	1.49	0.00	0.00	1.61	17.45	4.33	14.28	9.11	10.50	1.54	3.03	11.48	15.95	10.56	46.71	4.62	16.18	15.96	6.94	0.00	0.00	11.36	1.82	7.38	0.00	6.02	0.00
61	I10	Intron	0	10.24	10.68	2.00	2.45	0.83	4.92	7.56	0.94	7.93	4.43	2.84	1.58	0.22	8.88	5.96	4.11	19.86	5.04	11.44	6.13	2.92	0.00	0.93	8.07	10.24	2.68	5.00	2.50	0.57
62	I10_SR1	SilentIntronRegion	0	10.31	10.75	2.01	2.46	0.84	4.96	7.62	0.95	7.98	4.46	2.86	1.59	0.22	8.94	6.00	4.14	19.99	5.07	11.52	6.17	2.94	0.00	0.93	8.13	10.30	2.70	5.03	2.52	0.57
63	E11_Aa	NovelBoundary	0	0.00	16.97	1.15	21.35	0.00	5.45	0.00	0.00	1.31	3.91	2.88	2.38	0.00	6.18	16.74	3.14	18.41	0.00	0.00	7.61	3.25	0.00	4.48	8.25	4.66	10.17	8.55	2.29	2.05
64	ER11a	ExonRegion	0	78.82	46.48	74.96	207.95	52.68	57.56	93.86	56.52	23.14	53.90	26.72	22.73	38.28	73.40	33.60	24.35	44.17	42.85	83.81	59.57	16.72	29.59	47.43	47.45	63.22	45.22	25.16	24.54	11.28
65	E11_Da	KnownBoundary	0	60.64	25.89	65.48	169.10	52.61	23.14	96.01	61.31	22.14	38.79	24.01	11.99	33.82	55.77	15.75	14.38	46.68	70.25	129.48	57.56	18.41	22.95	39.89	36.31	50.65	28.97	41.40	31.00	7.33
66	ER11b	ExonRegion	0	57.05	55.14	29.94	87.85	42.95	62.49	93.54	31.01	45.54	47.14	40.77	17.44	38.52	54.95	57.76	25.81	38.75	37.56	131.74	56.95	33.87	19.55	28.41	50.50	54.10	33.81	51.47	17.84	11.12
67	E11_Db	KnownBoundary	1	183.44	160.84	78.71	229.71	196.15	97.07	185.15	65.69	153.21	234.76	196.93	83.25	152.41	270.35	163.24	193.77	60.82	34.16	16.18	196.33	207.41	148.91	430.59	298.24	476.07	526.38	198.49	817.53	77.19
68	ER11c	ExonRegion	0	18.95	34.48	12.19	28.67	33.28	35.63	51.23	16.49	46.05	27.70	40.30	15.14	29.69	33.37	77.96	23.37	44.60	24.35	101.02	36.51	14.59	8.06	15.76	53.30	31.90	26.02	45.41	14.26	9.24
69	E11_Dc	KnownBoundary	0	2.42	33.64	4.11	30.41	6.63	32.38	40.28	5.08	40.90	15.42	13.89	11.90	15.83	23.55	109.43	25.47	26.16	18.37	145.66	32.91	8.98	2.09	6.94	37.62	10.27	13.13	12.28	3.82	8.95
70	ER11d	ExonRegion	0	3.16	20.17	0.83	13.56	6.72	15.48	17.01	4.51	29.93	8.79	6.09	7.28	7.86	14.17	52.76	14.04	13.79	12.46	62.00	24.26	7.19	2.27	2.70	17.25	6.01	5.40	10.52	2.18	2.63