Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C1orf31	Gene	0	338.31	251.86	43.83	142.55	319.43	147.25	319.55	334.43	112.49	122.03	82.33	49.94	229.82	128.97	427.25	120.21	74.09	70.75	348.02	224.72	106.54	249.28	82.83	94.27	135.77	95.78	143.43	100.40	97.39
2	366615	Transcript	0	7.23	4.38	2.06	11.88	15.36	2.29	8.82	6.06	1.36	2.71	0.25	1.96	7.09	0.91	5.13	9.07	1.34	4.43	5.85	9.60	3.51	6.69	3.09	4.21	4.41	5.89	3.82	4.69	3.47
3	424237	Transcript	0	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	80.72	0.00	1.04	0.00	0.00	0.00	17.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	444797	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	366613	Transcript	0	193.96	9.65	8.03	53.96	76.82	19.49	70.91	63.02	16.10	9.55	4.62	7.65	9.34	10.33	58.96	26.98	13.02	23.98	24.88	9.52	20.47	154.63	28.45	15.52	26.11	33.46	40.74	11.61	29.15
6	366612	Transcript	0	31.33	26.29	14.98	39.02	52.57	11.21	41.60	36.55	11.05	11.32	8.95	14.59	7.79	12.35	66.34	24.01	27.28	7.41	34.10	11.19	14.46	26.39	16.78	16.44	14.76	14.29	34.31	30.85	7.17
7	ER1a	ExonRegion	0	14.47	7.12	4.11	9.14	30.72	4.58	15.62	12.12	2.72	5.41	0.50	1.44	3.79	1.81	7.47	15.61	2.67	8.87	4.90	14.99	4.16	12.47	6.18	3.05	4.53	11.79	7.63	8.56	6.93
8	ER1b	ExonRegion	0	222.89	40.60	36.51	147.34	256.22	63.03	159.48	223.32	27.05	52.15	13.55	10.08	80.13	31.44	82.17	106.40	40.01	43.71	69.78	78.61	64.74	248.24	65.34	25.14	49.43	63.87	43.27	58.95	64.10
9	E1_Ac	KnownBoundary	0	413.96	71.26	71.63	310.81	352.22	81.68	221.14	392.80	41.14	91.52	21.83	15.36	197.37	41.19	172.61	137.39	54.99	36.86	97.11	114.62	55.15	451.51	64.81	34.27	76.26	83.55	68.09	90.40	105.71
10	ER1c	ExonRegion	0	498.98	89.72	93.76	212.52	536.49	71.93	236.67	501.55	42.48	98.10	58.72	30.22	231.92	83.00	289.52	98.05	64.30	55.83	162.87	174.16	67.25	495.87	86.43	48.04	90.54	141.42	115.36	128.07	109.24
11	E1a_E2c	KnownJunction	0	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	80.72	0.00	1.04	0.00	0.00	0.00	17.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2d	KnownJunction	0	937.28	124.68	11.71	84.34	48.04	163.48	298.20	873.09	108.96	138.05	64.69	43.25	307.17	159.13	366.55	167.91	69.44	120.34	202.31	267.70	152.26	912.45	104.70	92.47	167.95	208.00	128.17	121.90	137.60
13	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00
14	E2_Ab	NovelBoundary	0	241.01	4.65	19.71	152.93	95.94	27.47	70.83	51.61	19.25	9.67	10.28	4.28	11.34	8.38	80.13	40.24	14.27	47.78	8.09	14.14	45.16	128.01	58.02	24.58	28.72	45.10	50.19	17.12	7.76
15	ER2a	ExonRegion	0	156.70	6.40	14.82	79.67	71.84	16.64	43.18	37.50	12.54	3.95	6.51	3.65	5.33	6.87	40.97	27.57	12.55	24.85	17.39	9.62	29.95	91.94	33.31	8.60	14.90	31.35	32.49	13.30	6.43
16	ER2b	ExonRegion	0	171.39	36.02	31.77	155.04	352.58	44.05	152.47	134.47	37.88	29.36	24.71	25.95	24.94	24.55	139.49	69.86	36.96	28.33	59.68	26.85	37.43	112.43	72.68	18.37	56.43	61.52	78.74	60.63	53.00
17	E2_Da	KnownBoundary	0	21.59	0.00	12.11	10.78	72.51	5.26	26.66	20.65	5.15	3.64	1.33	10.06	1.97	7.29	39.07	10.71	29.94	0.00	8.09	7.44	12.88	18.67	13.94	5.26	3.07	1.76	32.10	17.84	7.86
18	E2a_E2c	NovelJunction	0	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.75	0.00	0.00	8.37	0.00	1.37	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E2d	KnownJunction	1	231.22	12.89	1.25	28.26	81.79	22.33	98.64	88.53	19.67	15.14	2.72	11.66	13.34	13.78	76.94	26.39	13.48	23.12	32.37	9.43	10.99	217.32	23.59	22.43	37.32	35.58	49.00	9.93	51.86
20	ER2c	ExonRegion	0	31.33	26.29	14.98	39.02	52.57	11.21	41.60	36.55	11.05	11.32	8.95	14.59	7.79	12.35	66.34	24.01	27.28	7.41	34.10	11.19	14.46	26.39	16.78	16.44	14.76	14.29	34.31	30.85	7.17
21	E2_Ac	KnownBoundary	0	13.21	16.38	8.40	45.08	25.94	8.44	19.74	6.47	8.74	1.48	9.62	10.45	8.69	6.80	17.94	14.99	8.58	5.27	0.00	3.89	10.99	18.67	2.17	2.69	15.15	1.93	14.06	15.19	1.32
22	E2_Ad	KnownBoundary	0	14.92	4.85	1.40	17.90	0.00	8.79	21.97	26.08	3.17	0.00	7.56	10.57	3.22	3.57	43.05	0.00	18.23	0.00	8.09	11.00	1.60	4.76	2.51	8.85	3.49	4.85	37.02	9.71	3.07
23	ER2d	ExonRegion	0	465.85	97.45	19.45	121.88	172.69	92.10	203.59	436.34	58.80	65.93	55.94	52.77	133.80	81.63	313.63	95.32	61.44	55.49	143.32	137.72	95.57	405.62	60.88	70.99	115.30	119.97	125.15	94.54	88.58
24	ER2e	ExonRegion	0	973.00	535.75	44.88	141.56	265.53	329.07	828.52	1124.65	199.57	360.82	235.60	112.71	627.07	310.16	986.73	313.38	171.77	179.73	766.35	534.54	258.02	693.02	244.99	209.15	409.33	318.36	370.51	287.68	251.24
25	E2_Db	NovelBoundary	0	2.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.92	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	2.07	3.43
26	E2b_E3a	KnownJunction	0	684.23	734.40	160.08	180.53	629.57	338.48	827.84	755.25	245.69	264.28	207.36	117.11	525.65	344.09	1134.73	261.24	178.00	153.09	969.97	613.88	219.97	433.37	185.33	268.93	379.72	150.11	427.70	227.04	232.22
27	E3_Aa	NovelBoundary	0	0.00	17.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.84	1.23	0.00	1.95	0.00	0.00	2.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER3a	ExonRegion	0	443.52	619.44	66.29	239.94	598.39	331.51	576.62	369.59	284.05	215.48	153.16	93.87	443.75	279.11	885.71	185.82	116.80	129.54	820.77	489.98	207.91	266.73	95.52	208.30	232.08	92.73	237.02	114.72	160.49
29	ER3b	ExonRegion	0	2.14	3.28	1.12	14.63	0.00	1.37	4.03	0.00	0.00	0.00	0.00	2.47	16.89	1.81	5.60	5.06	0.00	0.00	31.68	8.43	8.56	1.80	0.00	6.45	8.58	0.00	1.83	1.63	1.34
30	ER3c	ExonRegion	0	0.00	3.28	0.00	14.63	0.00	0.00	4.03	0.00	0.00	0.00	0.00	2.47	14.29	0.00	5.60	2.53	0.00	0.00	22.63	8.43	4.28	1.80	0.00	6.45	5.72	0.00	0.00	1.63	1.34
31	ER3d	ExonRegion	0	0.00	1.64	0.00	14.63	0.00	0.00	2.02	0.00	0.00	0.00	0.00	2.47	10.39	0.00	2.80	2.53	0.00	0.00	6.79	4.22	2.85	0.90	0.00	5.38	4.29	0.00	0.00	0.82	0.00