Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C1orf96	Gene	0	14.90	67.79	8.18	26.41	190.26	62.61	18.22	48.38	21.15	32.67	30.31	28.73	38.32	41.52	44.48	21.78	35.08	48.11	28.62	102.58	57.50	19.72	40.07	34.33	15.88	30.19	22.69	16.45	81.74
2	483092	Transcript	0	1.24	1.15	0.24	0.01	3.92	1.52	0.27	1.30	0.83	2.23	0.86	0.83	0.89	0.96	3.18	0.91	3.83	1.36	0.78	1.92	1.28	0.44	1.14	1.00	0.08	1.11	0.36	0.40	0.88
3	284617	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	452552	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	366687	Transcript	0	0.00	9.20	0.00	0.00	6.97	1.10	0.00	1.47	4.72	1.16	1.67	0.49	0.00	3.27	34.72	1.52	0.00	2.73	4.53	3.37	2.57	0.36	2.89	2.15	0.86	2.51	0.00	1.30	0.81
6	366686	Transcript	0	0.48	0.35	0.00	0.00	1.60	0.59	0.22	0.41	0.86	1.11	0.41	0.00	0.43	0.31	2.40	0.54	2.45	0.21	0.01	0.02	0.78	0.99	0.20	0.00	0.33	1.04	0.00	1.25	1.20
7	ER1a	ExonRegion	0	1.24	0.00	0.27	0.00	4.87	0.00	0.33	0.31	0.00	0.63	0.00	0.62	0.00	0.12	1.53	0.00	0.54	1.28	0.00	0.00	0.00	0.84	0.74	0.00	0.00	0.35	0.00	0.00	0.39
8	E1_Ab	KnownBoundary	0	3.01	0.00	2.34	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.91	0.00	0.00	5.27	0.00	0.00	0.00	0.00	2.04	6.25	0.00	0.00	6.27	0.00	0.00	5.22
9	ER1b	ExonRegion	0	0.73	0.00	1.15	0.00	4.33	0.00	0.00	0.00	0.00	0.51	0.00	0.15	0.00	0.11	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.62	1.88	0.00	0.56	2.81	0.00	0.00	2.00
10	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	13.56	0.00	0.00	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	1.82	0.00	0.00	0.00	0.00
11	E2_Aa	NovelBoundary	0	3.01	4.65	0.00	0.00	12.97	0.00	0.00	7.32	0.00	0.00	0.00	2.98	0.00	1.91	0.00	3.82	3.94	18.37	0.00	27.54	6.14	9.87	7.39	0.00	0.00	10.04	0.00	6.87	11.98
12	E2_Ab	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	5.45	0.00	4.68	1.22	0.00	0.00	1.51	0.00	6.38	0.00	3.21	3.53	0.00	0.00	3.89	3.17	0.00	11.18	0.00	1.78	0.00	0.00	4.45	11.55
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	1.99	0.00	0.00	0.00	0.00	0.29	0.00	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.29	0.00	0.00	0.00	0.00
14	ER2b	ExonRegion	0	3.58	2.75	2.37	5.33	18.78	5.59	1.13	10.34	0.10	2.90	0.44	2.79	2.13	3.36	1.81	4.07	1.05	7.21	3.13	7.23	5.49	2.89	7.84	0.03	0.17	6.17	0.42	2.40	5.17
15	E2_Da	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55
16	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E2a_E4b	KnownJunction	0	11.15	36.94	6.90	17.69	61.75	37.56	2.92	50.86	2.86	20.41	4.84	16.20	12.93	32.99	0.00	21.57	8.42	4.62	8.09	63.02	56.96	14.15	23.25	0.00	1.93	28.71	11.78	7.73	35.09
18	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	6.19	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	1.42	0.00	0.00	4.75	1.08	0.30	1.34	0.81	0.50	1.91	0.26	0.00	0.00	0.00	2.42	0.00	1.98	0.43	0.71	1.22	0.94	0.80	0.00	0.47	0.63	4.16	1.21	1.80	1.77
20	I2_AR1	ActiveIntronRegion	0	1.43	0.00	0.00	4.67	1.08	0.30	1.34	0.82	0.50	1.92	0.26	0.00	0.00	0.00	2.44	0.00	1.99	0.43	0.71	1.22	0.95	0.80	0.00	0.48	0.63	4.18	1.22	1.81	1.78
21	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	5.89	2.92	0.00	0.00	0.00	5.59	0.00	1.14	0.00	0.00	0.00	0.00	7.77	0.00	0.00	0.00	9.06	0.00	0.00	2.99	0.00	0.00	0.00	2.25	0.00
22	ER3a	ExonRegion	0	0.96	0.70	0.00	0.00	3.21	1.18	0.44	0.83	1.71	2.21	0.81	0.00	0.85	0.61	4.81	1.09	4.91	0.42	0.02	0.04	1.56	1.97	0.40	0.00	0.65	2.08	0.00	2.50	2.39
23	E3_Da	NovelBoundary	0	2.42	0.00	1.42	0.00	0.00	2.99	0.00	0.00	1.89	3.83	0.00	0.00	0.00	0.84	0.00	0.00	6.15	0.00	0.00	11.25	0.00	0.00	0.00	0.00	0.00	1.63	0.00	1.93	1.58
24	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I3_AR2	ActiveIntronRegion	0	1.11	1.86	0.22	0.00	0.63	3.03	1.05	1.49	1.55	3.17	3.36	1.20	2.62	1.30	6.33	0.97	8.68	0.83	3.73	1.07	2.86	0.23	1.41	2.62	1.55	0.88	0.00	1.27	0.61
26	E4_Aa	NovelBoundary	0	0.00	0.00	1.02	0.00	0.00	0.00	0.00	2.54	0.00	2.04	3.10	4.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.10	0.00	0.00	4.56
27	ER4a	ExonRegion	0	0.00	0.00	1.02	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	2.53	0.70	2.02	0.00	0.00	0.00	0.00	0.00	1.59	0.00	0.00	0.00	0.00	1.05
28	ER4b	ExonRegion	0	1.24	2.30	0.21	0.03	2.98	3.03	0.21	2.29	1.66	3.83	1.73	1.05	1.78	1.80	4.82	1.83	7.12	1.44	1.56	3.84	2.56	0.03	1.55	2.01	0.15	1.87	0.72	0.80	1.37
29	E4_Ab	KnownBoundary	0	7.43	4.85	1.54	0.00	0.00	9.55	5.72	2.19	1.16	3.95	0.00	1.14	0.00	0.00	16.74	0.00	4.66	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	1.22
30	ER4c	ExonRegion	0	34.23	60.11	18.53	16.04	168.50	66.52	16.37	129.67	5.91	37.17	36.36	40.87	39.65	58.33	18.95	29.81	35.52	62.21	31.34	114.73	59.09	49.33	68.50	17.69	21.75	89.25	21.66	26.19	92.28
31	E4_Db	NovelBoundary	0	5.49	0.00	2.64	0.00	0.00	0.00	0.00	0.00	0.00	3.95	0.00	0.00	1.62	1.04	0.00	0.00	2.21	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	3.59	1.49
32	E4b_E5a	KnownJunction	1	34.27	57.30	27.08	20.71	259.96	92.39	13.22	152.33	6.40	45.18	68.36	53.04	49.49	66.54	35.08	36.87	43.33	69.35	24.05	114.70	75.81	50.76	86.97	13.34	22.35	144.28	46.17	45.47	109.64
33	I4	Intron	0	1.81	1.24	0.06	0.55	1.88	1.59	1.09	1.35	0.78	4.22	2.11	1.19	0.35	0.94	1.13	0.38	2.30	0.91	2.33	0.74	0.88	0.90	0.28	1.32	0.16	1.39	2.40	2.51	0.62
34	I4_SR1	SilentIntronRegion	0	1.82	1.24	0.06	0.55	1.88	1.59	1.09	1.35	0.78	4.23	2.11	1.19	0.35	0.94	1.13	0.38	2.30	0.92	2.34	0.74	0.88	0.90	0.28	1.33	0.17	1.39	2.40	2.51	0.62
35	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	3.64	3.07	1.84	0.00	0.00	0.00	0.00	2.12	4.62	8.09	0.00	0.00	0.00	0.00	3.05	3.86	0.00	1.99	0.00	0.00
36	ER5a	ExonRegion	0	20.67	84.44	13.20	38.34	289.06	92.34	23.63	63.19	17.13	49.39	48.55	41.06	41.75	58.40	34.59	30.46	46.16	68.15	41.59	148.84	83.64	26.13	61.39	29.93	23.04	40.78	34.66	23.08	95.45
37	E5_Da	KnownBoundary	0	15.99	107.42	11.26	55.00	238.15	89.24	42.11	130.78	40.75	92.23	50.65	66.14	83.11	91.44	77.54	37.79	76.62	74.75	32.37	165.15	98.79	46.43	107.96	30.92	38.30	141.27	61.48	29.88	222.94
38	ER5b	ExonRegion	0	17.12	99.95	8.74	36.70	256.70	83.93	27.81	60.56	34.60	39.70	35.12	38.25	58.44	53.81	67.35	28.69	48.97	65.86	37.12	136.56	77.48	23.64	49.45	57.65	20.31	36.32	29.51	20.75	123.90
39	E5_Db	KnownBoundary	0	13.68	92.10	4.21	38.82	236.38	98.64	17.45	50.06	65.29	43.98	52.07	34.22	86.78	51.31	182.38	57.68	43.71	67.04	64.74	187.23	73.20	22.12	34.18	86.25	18.07	45.32	36.03	22.06	146.48
40	ER5c	ExonRegion	0	15.83	90.27	5.02	25.32	144.97	53.85	16.63	42.57	54.69	35.27	33.18	25.20	61.32	46.72	134.46	20.41	37.53	38.33	31.01	101.89	52.96	22.81	25.59	72.57	17.89	21.52	21.97	17.41	107.14
41	ER5d	ExonRegion	0	0.00	9.20	0.00	0.00	6.97	1.10	0.00	1.47	4.72	1.16	1.67	0.49	0.00	3.27	34.72	1.52	0.00	2.73	4.53	3.37	2.57	0.36	2.89	2.15	0.86	2.51	0.00	1.30	0.81