Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C1orf55	Gene	0	64.30	167.18	52.39	54.81	77.97	141.72	95.67	78.23	71.42	143.75	135.40	68.78	95.85	127.09	106.03	77.51	105.73	113.75	181.18	74.49	185.10	58.48	102.71	90.59	98.79	150.67	197.26	47.78	127.00
2	366818	Transcript	0	9.78	8.49	3.21	13.89	10.32	13.95	10.24	13.30	0.00	14.25	8.60	4.75	2.84	9.12	5.09	10.15	3.22	9.28	7.50	2.09	16.50	12.31	8.82	4.27	6.41	17.99	19.77	2.53	2.50
3	272091	Transcript	0	0.00	6.57	0.00	0.00	1.66	2.29	2.69	0.00	3.37	3.85	0.40	1.24	1.30	0.00	20.54	0.00	2.34	3.64	9.05	0.00	3.33	0.00	0.00	0.72	0.48	3.14	1.22	0.00	0.00
4	366817	Transcript	0	2.24	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG36_AR6	ActiveIntergenicRegion	0	4.70	0.00	0.13	0.00	0.00	1.02	1.13	1.01	0.00	1.58	0.00	0.24	0.00	1.68	4.76	0.33	1.30	7.81	0.00	3.17	0.78	0.00	0.00	0.00	0.35	2.59	1.00	0.00	0.00
6	IG36_SR4	SilentIntergenicRegion	0	3.53	4.09	0.77	1.13	3.45	3.85	3.98	1.59	1.93	4.53	1.96	1.13	1.22	2.85	5.77	7.19	18.48	11.11	1.75	6.75	6.04	0.99	1.42	1.86	1.97	2.47	0.57	0.77	5.30
7	IG36_AR5	ActiveIntergenicRegion	0	1.40	4.04	0.54	0.00	3.98	4.69	3.87	3.00	3.01	2.82	1.94	3.02	0.21	2.43	7.73	6.13	10.86	8.98	2.60	4.49	6.04	0.88	0.00	2.45	1.86	0.77	1.19	0.27	2.18
8	IG36_SR3	SilentIntergenicRegion	0	2.70	4.84	0.81	2.91	2.33	2.32	1.80	1.56	1.29	4.95	1.38	1.63	0.41	2.62	5.37	3.35	10.78	4.87	1.67	2.77	2.82	0.50	0.07	2.69	2.61	2.84	0.41	0.79	3.23
9	IG36_AR4	ActiveIntergenicRegion	0	3.72	3.50	1.04	3.10	4.71	2.80	4.16	2.15	1.64	7.42	0.85	1.51	0.27	5.24	10.08	9.03	17.27	4.13	0.65	4.26	1.78	1.65	0.18	3.07	3.02	3.23	0.19	0.17	4.96
10	ER1a	ExonRegion	0	1.16	5.63	6.41	27.79	20.64	9.94	7.08	5.26	0.00	6.68	4.86	5.97	3.19	6.14	2.40	11.35	6.44	18.56	15.00	0.96	9.54	3.76	11.88	3.87	3.96	22.59	6.70	3.31	3.72
11	E1_Ab	KnownBoundary	0	0.00	8.73	1.49	21.57	6.34	12.55	5.84	9.21	0.00	3.52	5.25	5.99	4.55	3.50	0.00	10.40	1.17	4.62	0.00	0.00	8.82	2.43	11.28	0.00	1.52	15.79	2.29	0.00	9.01
12	E1_Ac	KnownBoundary	0	12.62	20.84	32.64	92.53	96.97	37.95	60.42	25.38	4.02	51.17	25.66	30.12	21.05	36.38	18.54	57.30	51.34	101.46	88.57	4.13	54.43	29.17	71.22	17.29	20.19	113.89	18.54	26.82	22.58
13	ER1b	ExonRegion	0	10.00	31.75	30.42	135.69	99.63	33.60	47.26	24.34	1.12	44.44	28.69	30.23	20.93	30.44	11.20	52.02	46.19	113.41	95.55	4.37	46.44	23.04	71.12	9.80	19.06	97.44	22.18	26.62	20.73
14	ER1c	ExonRegion	0	22.32	44.92	75.43	128.11	88.24	53.00	43.66	33.78	3.38	67.85	39.02	38.58	43.65	60.74	8.77	41.04	73.23	86.25	63.08	26.52	89.17	34.06	75.30	18.34	25.89	112.79	44.61	29.14	54.24
15	E1_Da	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1a_E2a	KnownJunction	0	41.05	36.36	8.45	8.84	13.85	50.84	27.98	49.12	8.44	50.61	36.98	20.42	23.34	55.19	0.00	13.39	22.35	37.76	8.09	17.53	47.85	28.54	31.91	28.05	31.41	54.97	22.81	9.21	24.99
17	I1	Intron	0	3.59	4.19	0.37	0.16	0.33	3.57	1.35	0.78	0.94	2.97	1.25	0.99	0.07	3.19	1.50	3.31	3.31	2.50	2.36	1.46	1.95	0.36	0.36	0.87	1.79	0.77	1.19	0.98	0.69
18	I1_AR1	ActiveIntronRegion	0	6.04	2.45	0.32	0.68	0.00	1.04	0.38	1.57	0.32	2.76	0.23	0.00	0.00	4.42	0.88	6.02	4.00	3.30	1.52	0.00	0.69	0.86	0.00	0.41	1.49	1.04	0.38	0.82	0.80
19	I1_SR1	SilentIntronRegion	0	2.85	4.73	0.39	0.00	0.43	4.35	1.65	0.54	1.13	3.04	1.57	1.30	0.09	2.81	1.70	2.48	3.10	2.25	2.62	1.92	2.33	0.21	0.48	1.01	1.88	0.69	1.44	1.03	0.65
20	E2_Aa	NovelBoundary	0	2.60	0.00	2.92	0.00	0.00	1.96	0.00	3.68	3.11	5.47	0.00	0.00	0.00	2.13	0.00	7.65	3.56	0.00	8.09	11.16	1.85	2.14	0.00	2.87	3.64	0.00	0.00	0.00	0.00
21	ER2a	ExonRegion	0	84.25	65.70	14.14	16.40	7.40	103.68	54.30	119.61	9.36	84.92	69.39	34.18	47.35	113.30	18.67	45.48	48.87	68.89	51.57	49.57	123.53	113.46	40.55	51.69	69.43	119.49	95.24	27.51	59.87
22	E2_Da	KnownBoundary	0	114.79	82.80	14.50	29.33	0.00	147.56	72.89	154.57	10.11	115.44	93.04	28.64	53.69	137.48	44.45	74.74	43.40	97.09	80.92	93.37	198.59	179.25	54.32	85.30	108.05	190.80	129.91	47.99	75.60
23	E2a_E2b	KnownJunction	0	18.40	11.34	0.00	0.00	0.00	17.96	13.39	21.35	0.00	21.81	12.34	3.52	2.48	12.10	7.77	8.95	0.00	0.00	0.00	3.23	23.46	20.86	5.76	4.67	8.87	13.39	32.85	1.75	1.29
24	ER2b	ExonRegion	0	100.92	137.34	23.14	23.12	10.77	243.47	131.73	161.52	17.40	210.83	199.33	80.43	98.23	204.40	46.32	139.05	135.02	163.82	118.53	105.97	318.93	124.68	121.15	73.26	165.92	308.08	146.47	68.68	151.37
25	E2_Ab	KnownBoundary	0	87.30	179.84	21.93	17.04	11.94	330.34	210.78	141.38	26.71	333.59	278.89	116.02	117.47	206.15	43.45	185.74	179.29	251.72	194.22	80.30	417.39	54.84	191.93	54.13	181.96	432.66	138.26	118.08	202.21
26	ER2c	ExonRegion	0	56.85	110.39	32.98	15.39	19.51	249.13	158.95	127.49	17.37	251.85	327.65	111.58	124.76	214.80	44.69	121.26	179.16	183.48	146.43	68.10	263.67	46.65	227.88	68.48	133.11	416.55	275.30	127.18	190.70
27	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E2b_E3a	KnownJunction	0	36.28	58.56	40.39	21.57	17.68	125.19	94.86	79.48	5.39	118.72	242.73	84.64	97.54	172.80	61.59	66.86	152.57	107.37	64.51	42.92	113.19	51.83	206.95	62.21	70.31	281.77	344.40	97.37	143.77
29	E3_Aa	NovelBoundary	0	0.00	4.56	1.02	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	1.39	1.34	0.91	8.37	3.37	0.00	0.00	16.18	0.00	0.00	0.00	0.00	2.21	0.00	0.00	0.00	0.00	0.00
30	ER3a	ExonRegion	0	72.52	81.63	120.51	70.93	105.28	133.60	80.50	126.64	16.37	148.23	139.12	70.96	92.25	194.23	56.38	62.85	121.48	108.53	67.81	79.17	145.56	65.71	134.81	65.90	108.03	210.36	230.16	65.15	100.08
31	E3_Da	KnownBoundary	0	91.07	111.20	191.92	133.30	172.57	142.84	95.55	137.20	21.74	158.34	124.80	51.41	97.44	182.26	40.06	55.84	106.56	122.52	113.07	118.92	167.54	86.00	115.24	63.70	121.54	169.30	136.47	54.10	73.88
32	E3a_E4b	KnownJunction	0	2.24	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3b	ExonRegion	0	95.55	114.72	174.12	162.85	203.96	153.67	86.83	121.83	18.28	192.05	157.69	80.28	86.53	196.04	40.17	74.90	110.05	120.77	115.32	108.10	153.80	76.55	119.45	62.59	151.07	189.59	163.04	58.62	104.25
34	E3_Db	NovelBoundary	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	2.47	0.00	2.88	0.00	0.00	4.41	4.62	16.18	0.00	4.09	0.00	4.14	0.00	0.00	0.00	0.00	0.00	0.00
35	E3b_E4a	KnownJunction	0	100.57	119.15	132.52	349.85	414.85	209.22	85.25	166.47	14.68	259.01	236.69	90.15	83.24	209.56	43.65	97.00	112.07	130.23	96.88	76.17	167.66	88.48	129.13	84.04	174.80	259.59	216.78	39.85	139.48
36	I3	Intron	0	0.34	2.99	0.26	0.00	0.00	0.65	0.32	0.29	0.00	0.00	0.38	0.39	0.61	0.36	0.00	1.35	0.47	1.52	3.53	0.44	2.48	0.85	0.29	0.00	0.23	0.00	0.58	1.29	1.90
37	I3_SR1	SilentIntronRegion	0	0.34	3.01	0.27	0.00	0.00	0.66	0.32	0.29	0.00	0.00	0.38	0.39	0.62	0.36	0.00	1.36	0.47	1.53	3.55	0.44	2.49	0.86	0.29	0.00	0.23	0.00	0.58	1.29	1.91
38	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.00	0.00	1.13	0.00	6.96	0.00	0.00	0.00	0.00	1.56	0.00	2.51	2.99	0.00	0.00	0.00	0.00	0.00
39	ER4a	ExonRegion	0	96.32	85.70	86.19	137.11	151.63	126.33	85.67	111.64	12.23	155.40	161.99	81.46	87.75	190.42	62.31	87.44	101.76	145.74	95.50	81.16	141.03	82.25	124.07	65.53	105.04	181.70	140.96	53.53	92.21
40	E4_Ab	KnownBoundary	0	115.91	116.15	78.53	19.41	27.56	94.50	112.26	111.77	17.69	164.14	136.19	80.06	115.66	194.91	102.65	60.82	122.47	140.63	121.39	75.09	159.72	95.53	119.28	35.29	88.35	219.25	100.29	76.20	105.64
41	ER4b	ExonRegion	0	104.43	108.77	80.37	49.08	32.10	89.43	81.37	127.44	23.86	177.70	139.39	86.07	103.43	210.59	55.94	73.90	124.97	166.02	131.60	87.01	137.76	95.91	157.96	73.59	132.77	226.87	154.78	73.64	99.72
42	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	2.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.57	0.00	0.00	0.00
43	E4a_E5a	KnownJunction	0	129.89	70.97	76.31	81.96	20.48	103.44	95.15	123.02	26.98	175.68	156.40	98.37	95.02	214.70	15.75	124.92	115.52	154.37	218.27	101.39	159.36	99.71	155.58	98.82	171.28	304.91	253.61	82.85	107.56
44	I4_AR1	ActiveIntronRegion	0	0.00	0.00	0.65	0.00	0.00	2.75	0.00	0.00	0.00	0.84	0.00	0.00	0.00	0.49	0.00	0.00	1.00	3.18	0.00	0.00	1.43	0.00	0.00	0.00	1.43	1.96	0.00	0.20	0.00
45	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	1.36	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER5a	ExonRegion	0	133.05	116.76	85.79	52.82	66.45	106.25	107.90	142.90	25.50	191.40	212.41	115.27	123.42	219.26	65.63	109.24	147.05	170.97	140.00	97.17	170.44	117.94	202.67	78.29	162.96	276.81	229.15	81.58	148.19
47	E5a_E6a	KnownJunction	0	109.89	135.73	96.40	84.34	110.38	85.75	129.76	134.47	36.09	231.96	192.21	101.90	107.28	192.70	41.86	87.13	144.08	205.10	129.25	102.30	105.77	85.96	197.49	90.56	172.76	272.59	161.12	116.91	158.27
48	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.09	0.00	0.00	1.61	1.72	0.00	0.00	0.00	0.00	3.60	0.00	0.00	8.27	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER6a	ExonRegion	0	111.59	142.72	114.98	63.20	98.75	121.62	106.60	162.11	35.40	218.38	202.98	104.11	118.89	221.05	99.33	107.16	139.51	169.24	147.64	101.26	170.96	128.06	192.07	107.93	184.34	281.40	251.48	81.97	167.88
50	E6_Da	NovelBoundary	0	13.09	0.00	0.00	0.00	7.37	0.00	0.00	2.54	3.05	0.00	0.00	1.42	0.00	4.21	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	4.33	0.00	1.93	0.00	0.00	0.00	1.68
51	E6a_E7a	KnownJunction	0	121.98	113.82	89.47	56.73	80.32	210.52	182.57	221.61	49.94	203.72	213.12	102.47	104.48	193.36	66.17	152.31	131.25	193.42	177.81	80.88	325.94	67.04	164.69	95.29	147.71	320.78	271.00	55.98	181.48
52	E7_Aa	NovelBoundary	0	0.00	0.00	1.49	0.00	0.00	3.91	0.00	2.29	0.00	5.15	0.00	1.54	0.00	2.26	8.37	0.00	1.08	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER7a	ExonRegion	0	98.92	162.48	78.23	68.32	109.79	223.76	154.73	127.06	47.42	214.61	227.46	93.34	121.16	185.55	80.18	97.16	122.21	161.96	180.51	86.59	305.51	72.30	151.48	106.65	163.40	251.96	332.73	64.25	173.34
54	E7_Da	KnownBoundary	0	63.70	224.83	42.63	31.06	67.79	272.72	131.71	45.78	64.01	181.67	205.12	69.97	140.91	144.06	104.24	107.63	95.53	172.61	153.53	41.43	388.55	46.77	105.44	129.38	117.63	167.49	318.56	43.22	219.64
55	ER7b	ExonRegion	0	46.21	195.25	29.46	44.41	69.45	142.62	89.33	47.75	97.69	118.39	107.81	56.98	91.22	90.89	128.82	69.31	96.07	91.88	210.94	68.81	182.56	37.97	70.75	94.75	71.44	95.92	181.98	35.49	120.17
56	ER7c	ExonRegion	0	0.00	6.57	0.00	0.00	1.66	2.29	2.69	0.00	3.37	3.85	0.40	1.24	1.30	0.00	20.54	0.00	2.34	3.64	9.05	0.00	3.33	0.00	0.00	0.72	0.48	3.14	1.22	0.00	0.00