Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NPPAAS	Gene	0	14.25	7.70	6.93	5.12	2.79	3.93	9.08	1.64	16.59	4.64	4.04	4.76	3.20	18.12	10.26	12.19	28.17	18.95	16.56	107.79	2.04	0.71	5.04	6.53	2.40	5.50	0.20	14.39	3.85
2	446542	Transcript	0	10.64	3.23	5.61	5.32	2.99	2.04	6.19	0.37	14.11	2.76	2.13	2.51	1.70	14.77	5.28	6.87	18.99	15.02	11.93	11.56	1.78	0.34	4.18	6.23	1.33	5.02	0.12	10.19	1.08
3	400892	Transcript	0	7.54	3.97	3.41	1.85	0.00	3.23	8.73	1.29	9.64	2.06	2.11	3.01	4.65	14.02	4.93	6.72	22.61	17.32	6.57	159.13	1.39	0.74	3.27	5.22	0.80	1.72	0.00	13.07	2.71
4	ER1a	ExonRegion	0	2.05	2.34	3.12	0.00	3.47	1.29	7.52	0.00	7.20	3.89	0.95	2.24	1.21	7.47	0.00	2.65	10.21	6.56	5.05	1.87	1.90	0.48	3.59	2.75	1.53	2.43	0.00	5.27	0.36
5	E1_Da	NovelBoundary	1	48.49	36.94	58.30	0.00	12.08	47.35	12.59	24.78	29.72	56.92	47.99	105.30	25.54	106.40	39.07	82.54	133.93	98.25	64.74	26.46	35.34	27.81	40.68	63.70	94.83	41.88	33.65	110.80	42.62
6	E1a_E2a	KnownJunction	0	8.61	0.00	0.00	0.00	6.93	1.96	0.00	0.00	18.88	0.00	0.00	1.42	0.00	16.20	0.00	0.00	9.93	18.49	0.00	4.13	0.00	0.00	4.43	2.33	0.00	1.80	0.00	6.20	0.00
7	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.22	0.00	0.00	0.00	0.00
8	I1	Intron	0	6.43	1.29	1.34	0.00	0.00	0.27	2.02	0.37	1.45	0.29	0.95	1.73	1.04	3.71	4.04	4.33	6.87	7.51	5.75	1.65	0.57	1.08	0.72	1.72	0.86	1.26	0.00	0.98	0.40
9	I1_SR1	SilentIntronRegion	0	6.48	1.30	1.35	0.00	0.00	0.28	2.03	0.37	1.47	0.29	0.96	1.75	1.05	3.74	4.07	4.36	6.92	7.57	5.80	1.67	0.58	1.09	0.73	1.73	0.86	1.27	0.00	0.99	0.40
10	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	7.37	0.00	0.00	0.00	1.49	2.04	2.97	2.71	1.24	4.01	0.00	13.23	15.58	14.64	0.00	7.36	0.00	2.24	0.00	0.00	0.00	3.86	0.00	2.29	1.62
11	ER2a	ExonRegion	0	14.37	4.91	7.45	21.66	2.81	2.83	13.71	1.19	19.09	6.23	4.70	5.38	4.07	18.77	8.90	12.99	23.56	22.01	16.04	12.40	2.98	0.58	5.40	6.30	1.85	8.32	0.59	12.88	1.94
12	E2_Ab	KnownBoundary	0	23.12	0.00	5.56	20.71	14.00	1.73	10.99	0.00	35.17	3.87	8.70	2.62	3.25	17.35	9.77	6.66	19.79	28.51	24.28	15.22	2.05	0.00	2.12	8.73	0.00	2.02	0.00	30.24	0.00
13	ER2b	ExonRegion	0	15.28	11.36	6.66	3.00	5.33	2.85	10.13	0.89	18.25	2.53	6.28	6.86	1.64	21.98	9.88	7.59	31.36	29.92	18.12	17.26	1.78	0.00	4.09	4.16	0.80	8.63	0.88	14.55	3.56
14	E2_Da	NovelBoundary	0	5.90	0.00	2.67	0.00	0.00	0.00	0.00	4.73	1.25	1.52	0.00	0.00	1.27	1.24	0.00	3.14	5.76	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.29
15	E2a_E3a	KnownJunction	0	19.17	12.02	11.29	20.71	0.00	7.06	10.01	0.00	26.22	3.71	18.16	10.24	3.18	20.58	34.48	6.96	36.08	23.63	16.18	39.70	2.05	0.00	10.05	5.92	1.55	0.00	0.00	10.60	1.95
16	I2_SR2	SilentIntronRegion	0	0.67	0.00	0.00	2.26	0.00	0.87	0.63	0.00	0.35	0.91	0.75	0.00	0.61	1.43	2.90	1.34	6.11	4.25	0.00	1.73	6.73	0.00	0.00	0.00	0.45	0.99	0.00	1.03	0.00
17	E3_Aa	NovelBoundary	0	0.00	8.53	0.00	0.00	0.00	3.68	0.00	0.00	0.00	2.04	0.00	1.45	0.00	2.26	0.00	0.00	2.70	0.00	0.00	0.00	2.05	0.00	0.00	0.00	1.70	0.00	0.00	2.16	2.05
18	ER3a	ExonRegion	0	26.36	14.27	11.36	4.92	6.79	8.94	16.39	2.13	28.25	6.81	9.86	4.25	3.83	28.92	15.15	16.20	40.21	24.03	30.04	46.96	2.98	0.00	8.79	11.30	5.86	4.58	0.00	20.35	6.89
19	E3_Da	NovelBoundary	0	10.68	0.00	1.54	0.00	0.00	0.00	0.00	0.00	5.24	5.79	1.46	0.00	1.97	5.87	0.00	3.37	15.46	0.00	0.00	937.81	0.00	0.00	0.00	0.00	1.74	0.00	0.00	2.29	1.78
20	E3a_E4a	KnownJunction	0	8.20	4.85	8.07	0.00	0.00	1.80	2.29	0.00	12.91	0.00	1.39	0.00	0.00	10.95	0.00	3.82	18.07	13.61	24.28	11.74	1.76	0.00	2.36	7.60	0.00	3.60	0.00	10.83	0.00
21	E3a_E4b	KnownJunction	0	5.37	0.00	1.45	0.00	0.00	2.99	13.10	0.00	6.97	0.00	2.85	1.36	6.11	14.87	0.00	0.00	19.25	19.26	0.00	7.77	1.85	0.00	2.36	5.74	0.00	0.00	0.00	11.10	1.22
22	Ix	Intron	0	2.65	2.56	1.72	0.74	0.00	0.85	0.83	0.76	2.25	3.12	0.98	0.44	1.07	2.80	3.80	1.79	11.23	7.15	4.28	8.28	0.59	0.56	1.30	2.44	1.33	1.62	0.19	1.85	1.17
23	Ix_AR1	ActiveIntronRegion	0	2.94	3.61	2.27	1.41	0.00	0.81	0.79	0.72	1.86	3.60	1.14	0.46	1.61	2.93	5.26	2.59	17.82	9.79	4.94	11.76	0.28	0.71	1.37	3.60	1.40	2.47	0.36	3.20	2.18
24	Ix_SR1	SilentIntronRegion	0	2.60	0.00	0.19	0.00	0.00	0.00	0.00	0.00	0.70	0.48	0.17	0.91	1.05	3.84	1.07	2.05	2.19	4.09	8.19	9.90	0.00	0.00	0.30	1.23	0.00	0.00	0.00	0.00	0.32
25	Ix_AR2	ActiveIntronRegion	0	2.29	1.72	1.34	0.00	0.00	1.10	1.08	0.98	3.14	3.08	0.95	0.33	0.35	2.42	2.46	0.66	4.35	4.29	2.56	3.27	1.14	0.48	1.45	1.15	1.53	0.84	0.00	0.44	0.00
26	E4_Aa	NovelBoundary	0	7.55	0.00	0.00	0.00	0.00	1.57	0.00	0.00	1.55	2.04	0.00	2.65	0.00	3.12	0.00	0.00	1.35	0.00	0.00	1057.14	7.62	0.00	0.00	2.69	0.00	0.00	0.00	5.39	2.54
27	ER4a	ExonRegion	0	19.99	4.04	9.43	4.93	1.73	2.31	7.43	0.65	12.47	3.70	3.62	3.53	3.20	20.49	17.50	14.90	33.18	14.42	14.30	27.64	2.23	0.64	5.11	12.15	3.29	8.93	0.00	15.78	3.11
28	E4_Ab	KnownBoundary	0	11.68	0.00	0.00	0.00	0.00	1.88	2.92	0.00	12.46	2.04	0.00	4.58	0.00	15.29	9.97	6.73	13.75	5.39	0.00	348.91	2.01	0.00	0.00	7.84	0.00	0.00	0.00	8.31	15.32
29	ER4b	ExonRegion	0	17.91	4.70	6.76	0.00	0.00	6.04	7.48	3.66	23.72	6.63	2.60	7.21	7.32	21.44	12.98	20.65	37.31	23.62	22.71	101.81	3.31	1.42	4.36	7.80	2.64	5.60	0.00	16.09	6.92
30	E4_Da	KnownBoundary	0	24.30	4.27	4.83	0.00	0.00	6.94	2.46	4.43	17.72	4.03	0.00	9.10	3.34	12.87	0.00	13.85	38.11	20.04	16.18	391.66	0.00	2.48	1.92	8.25	1.89	9.53	0.00	7.86	3.50
31	ER4c	ExonRegion	0	9.71	7.94	5.38	3.70	0.00	3.46	4.36	2.57	12.30	4.11	1.37	4.67	3.18	13.17	9.87	13.44	25.98	15.37	13.13	310.48	0.94	1.48	4.18	4.69	1.59	3.43	0.00	15.03	4.20