Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	KIAA0495	Gene	0	27.80	17.74	45.28	8.55	14.23	26.95	11.49	19.68	14.27	30.70	21.33	41.08	8.73	40.74	21.07	25.01	63.84	40.09	17.27	3.13	12.69	7.77	17.80	38.90	21.56	18.45	4.24	22.61	10.69
2	447410	Transcript	0	4.46	0.99	6.55	6.35	22.29	3.29	1.22	0.97	0.00	6.10	0.69	2.52	1.15	5.04	2.87	13.22	7.82	18.21	4.05	1.04	0.79	3.07	8.72	2.60	1.44	3.14	0.00	6.40	0.47
3	423764	Transcript	0	16.38	9.34	34.16	17.68	0.21	14.92	9.50	22.96	11.12	30.68	8.57	36.48	10.22	27.50	3.22	3.28	36.59	9.44	9.97	2.99	9.09	7.98	13.02	28.21	10.70	10.69	0.92	32.81	7.57
4	452079	Transcript	0	29.41	18.20	34.76	8.23	12.48	25.09	9.75	13.44	15.70	26.30	19.99	33.83	8.19	39.41	23.60	27.48	63.08	36.30	16.70	2.23	11.67	4.56	13.47	36.99	22.16	14.47	4.58	19.27	10.07
5	418088	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	8.91	1.99	12.73	12.70	44.57	5.90	2.44	1.94	0.00	12.20	1.38	5.05	2.29	10.07	5.75	26.44	15.13	36.41	8.10	2.07	1.58	5.84	17.13	5.21	2.63	6.29	0.00	11.71	0.04
7	E1_Ab	KnownBoundary	0	11.68	9.70	18.99	40.98	132.78	17.30	5.84	11.60	1.25	35.31	4.59	10.51	4.65	15.38	9.97	76.35	10.26	80.27	0.00	2.98	3.65	4.38	36.69	9.15	7.58	20.73	0.00	16.89	1.68
8	E1_Ac	KnownBoundary	0	11.74	0.00	24.27	0.00	13.56	7.67	16.31	5.08	0.00	11.82	0.00	13.79	5.10	8.22	9.97	17.44	33.70	9.25	0.00	0.00	0.00	7.39	7.09	5.92	0.00	7.94	0.00	16.04	1.49
9	ER1b	ExonRegion	0	16.99	3.28	22.36	21.94	69.74	11.00	11.37	5.52	0.00	20.83	2.38	13.16	5.20	14.58	11.20	52.78	27.69	50.29	12.61	1.61	2.85	9.01	28.93	10.76	4.29	15.72	0.00	22.82	1.34
10	ER1c	ExonRegion	0	21.06	4.30	24.16	5.25	11.32	13.06	6.25	8.79	1.92	16.02	7.07	17.76	4.50	21.83	9.68	19.97	27.88	30.71	4.15	2.62	4.37	6.29	14.03	11.90	7.17	10.90	1.08	10.80	3.84
11	E1_Ad	KnownBoundary	0	34.68	18.03	27.66	0.00	12.82	12.12	8.75	23.94	2.92	21.61	20.15	55.84	10.48	55.26	9.97	24.40	67.39	37.89	16.18	0.00	0.00	18.04	24.53	20.82	10.49	19.78	2.14	14.02	11.82
12	ER1d	ExonRegion	0	55.42	22.91	99.25	12.82	21.46	70.36	27.31	46.57	13.91	60.45	48.88	90.07	11.69	84.97	24.92	40.04	122.04	75.01	25.92	4.55	32.29	17.95	41.65	56.69	32.41	36.93	10.40	45.32	12.18
13	E1_Da	KnownBoundary	0	83.41	39.46	96.30	0.00	42.44	75.85	17.56	53.95	22.87	96.51	60.71	119.88	12.55	102.30	25.91	61.73	207.81	94.65	24.28	7.77	20.18	15.41	27.28	106.59	31.86	52.87	8.95	60.21	17.46
14	E1a_E1e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1e	ExonRegion	0	68.31	38.83	102.43	9.87	21.95	58.96	22.12	68.92	22.49	77.87	63.69	124.55	18.84	103.89	19.02	51.00	193.80	95.50	27.84	5.54	26.25	23.62	48.00	100.33	55.22	56.27	12.10	60.28	18.75
16	E1_Ae	KnownBoundary	0	74.50	47.70	98.96	0.00	19.31	52.18	22.71	63.65	22.75	58.32	49.35	143.01	23.41	98.49	8.37	51.71	204.56	64.60	24.28	4.13	23.75	16.53	46.64	103.78	56.34	36.43	9.94	46.77	22.98
17	ER1f	ExonRegion	0	45.77	28.94	115.25	15.35	24.67	37.83	18.16	40.76	17.86	51.22	29.79	85.62	14.87	74.83	22.17	28.53	122.84	75.90	27.45	5.28	18.91	14.75	35.93	65.81	35.67	36.32	1.87	48.38	18.29
18	E1_Db	NovelBoundary	0	2.89	4.85	4.53	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	1.33	0.00	2.90	8.37	0.00	0.88	15.41	0.00	0.00	0.00	0.00	1.97	3.05	0.00	0.00	0.00	0.00	0.00
19	E1b_E3a	KnownJunction	1	30.91	26.37	114.38	27.61	41.26	31.38	4.63	46.83	26.04	28.44	39.70	86.69	9.65	81.27	8.37	20.88	114.77	47.01	40.46	3.39	9.59	23.87	33.24	58.80	44.36	56.05	4.87	50.32	21.36
20	E1b_E4b	NovelJunction	0	0.00	0.00	1.54	31.49	0.00	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	2.04	9.37	0.00	9.39	10.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E1b_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
22	ER2a	ExonRegion	0	0.00	0.00	0.37	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.50	0.00	0.00	0.00	0.00	0.30	0.30	0.00	0.24	0.00	0.00	1.09	0.89
23	I2_AR1	ActiveIntronRegion	0	0.56	0.00	3.12	0.00	0.00	0.99	0.00	0.00	1.82	0.81	0.00	0.27	0.00	0.85	0.00	0.10	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.77	0.00	0.00	0.00	0.00	0.00
24	I2_AR2	ActiveIntronRegion	0	2.14	0.00	1.72	4.39	0.00	0.00	0.00	0.00	1.12	1.73	0.00	2.35	0.00	0.70	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I2_AR3	ActiveIntronRegion	0	1.93	0.00	0.21	1.89	0.00	0.00	0.86	0.00	0.17	1.66	0.00	0.67	1.93	0.80	0.00	2.11	0.57	2.46	1.36	0.00	1.21	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00
26	E3_Aa	NovelBoundary	0	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	3.10	0.00	0.91	8.37	2.75	5.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	25.29	27.49	70.71	23.40	45.41	40.35	14.99	35.50	24.32	39.44	30.35	77.32	11.49	65.43	24.17	21.51	101.72	61.51	19.95	1.64	13.53	14.66	24.45	46.98	32.42	39.48	2.17	40.96	21.25
28	E3_Da	NovelBoundary	0	2.18	0.00	0.97	0.00	0.00	1.61	0.00	0.00	0.00	3.71	0.00	0.00	0.00	4.61	0.00	0.00	3.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.35
29	E3a_E4a	KnownJunction	1	13.33	8.34	41.66	26.96	0.00	11.43	7.55	20.80	12.39	32.48	4.30	29.61	13.44	24.11	0.00	0.00	40.04	0.00	8.09	0.00	7.86	6.76	14.18	30.75	8.87	8.11	0.00	31.77	7.79
30	E3a_E4b	KnownJunction	0	10.85	8.53	55.93	30.84	7.22	18.07	21.28	18.71	15.99	26.16	21.57	40.69	9.08	24.75	27.90	20.04	68.05	33.39	16.18	3.89	7.58	13.66	13.84	15.79	15.76	35.02	0.00	20.08	15.65
31	I3_AR1	ActiveIntronRegion	0	0.00	0.00	1.51	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.72	0.00	0.00	1.24	0.00	0.00	0.00	1.65	0.00	0.00	0.35	0.00	0.58	0.78	0.74	1.07	0.00	2.52	0.00
32	I3_SR1	SilentIntronRegion	0	0.00	0.00	1.99	0.00	0.00	0.08	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.96	0.00	0.00	0.00	2.50	0.00	0.00	1.43	0.00	1.55	1.66	0.69	0.27	0.00	0.00	0.00
33	E4_Aa	NovelBoundary	0	4.60	0.00	2.64	0.00	0.00	0.00	0.00	0.00	0.00	1.68	1.39	3.01	1.24	2.30	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	0.00	0.00	3.10
34	ER4a	ExonRegion	0	19.43	10.34	26.67	8.40	0.42	18.40	11.45	25.11	9.85	28.88	12.84	43.34	6.99	30.90	6.43	6.57	33.14	18.87	11.84	5.98	10.32	9.21	11.85	25.68	12.53	13.28	1.83	33.85	7.34
35	E4_Ab	KnownBoundary	0	27.84	16.09	33.24	0.00	0.00	22.10	13.56	37.13	11.54	31.96	16.36	57.44	2.99	34.61	7.37	6.81	40.49	27.74	0.00	15.71	12.71	9.43	16.25	14.12	23.19	16.09	0.00	31.95	9.01
36	ER4b	ExonRegion	0	37.88	36.44	89.22	8.68	27.75	48.36	21.14	36.65	24.10	50.36	36.56	81.24	19.33	75.17	26.59	37.70	110.24	63.05	30.54	6.15	17.20	15.20	26.21	54.22	44.46	48.28	0.05	43.04	26.07
37	E4_Da	NovelBoundary	1	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.50	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.72	0.00
38	E4a_E5a	KnownJunction	0	37.87	12.80	97.17	0.00	50.70	38.67	21.23	36.28	12.03	45.22	26.48	70.75	16.05	60.73	50.03	25.86	77.97	51.12	16.18	0.00	6.90	14.78	34.87	69.27	36.71	20.43	0.00	23.59	20.50
39	I4_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.03	0.10	0.00	0.00	0.00	2.14	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E5_Aa	NovelBoundary	0	10.15	4.17	0.00	0.00	6.34	4.95	4.92	12.94	0.00	6.59	2.72	6.48	0.00	2.99	0.00	6.58	6.69	0.00	0.00	0.00	1.72	2.09	0.00	15.49	1.63	3.69	0.00	6.25	4.23
41	ER5a	ExonRegion	0	36.31	18.14	87.65	11.70	24.97	37.89	24.71	29.85	18.88	45.09	32.57	74.92	21.40	56.86	27.89	32.51	107.70	61.64	24.85	9.72	22.01	16.12	26.55	40.18	39.26	31.29	5.42	41.77	22.34
42	E5_Da	KnownBoundary	0	22.00	4.56	13.95	0.00	0.00	18.15	10.53	2.54	7.49	12.86	7.05	14.19	1.40	27.58	16.34	17.52	80.54	23.89	24.28	0.00	8.98	2.48	2.27	16.75	7.96	15.96	0.00	22.96	6.31
43	E5a_E5b	KnownJunction	0	5.66	0.00	17.14	0.00	0.00	5.22	2.86	8.36	3.75	0.00	1.39	13.04	10.29	2.26	0.00	0.00	11.28	9.25	0.00	0.00	3.93	4.81	2.36	2.63	7.08	6.18	0.00	2.29	1.58
44	ER5b	ExonRegion	0	29.41	18.20	34.76	8.23	12.48	25.09	9.75	13.44	15.70	26.30	19.99	33.83	8.19	39.41	23.60	27.48	63.08	36.30	16.70	2.23	11.67	4.56	13.47	36.99	22.16	14.47	4.58	19.27	10.07
45	E5_Ab	KnownBoundary	0	54.74	71.84	73.42	28.47	33.16	65.38	22.14	17.57	27.44	61.20	40.68	52.65	15.38	49.17	41.26	36.64	83.49	32.36	32.37	15.05	28.32	16.92	28.91	91.46	55.09	90.72	18.34	25.57	53.55
46	ER5c	ExonRegion	0	25.05	34.26	42.51	11.13	15.92	31.44	16.91	22.89	28.56	50.00	33.60	41.44	13.94	41.75	39.47	33.89	57.44	45.72	36.42	6.94	18.88	12.23	21.17	72.20	30.93	21.44	9.72	21.69	16.94
47	E5_Db	KnownBoundary	0	14.16	7.56	11.36	0.00	7.37	3.72	2.12	7.12	8.74	5.59	1.17	5.21	6.11	8.86	0.00	3.82	4.32	13.87	0.00	3.23	1.93	0.00	6.50	10.83	1.93	6.01	0.00	2.07	1.29
48	ER5d	ExonRegion	0	4.62	1.71	5.84	1.58	2.06	4.50	0.63	5.37	4.38	4.26	1.19	5.89	0.85	4.46	7.68	5.25	10.05	5.17	1.54	0.02	1.29	0.63	2.22	8.70	2.47	2.23	0.32	3.38	2.76