Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF787	Gene	0	48.99	54.76	70.37	21.43	41.60	50.15	20.37	45.10	63.93	69.09	50.78	69.31	127.42	63.81	44.76	45.86	48.30	116.68	42.76	48.42	48.79	77.12	120.65	95.66	56.03	74.13	22.53	101.50	68.22
2	270459	Transcript	0	44.76	40.93	56.74	29.68	33.86	38.25	16.00	38.57	54.94	47.74	29.99	49.73	113.28	49.27	29.52	35.57	34.23	95.16	22.95	50.56	38.61	84.14	81.10	96.63	46.32	64.52	15.13	73.90	63.82
3	ER1a	ExonRegion	0	38.88	28.27	20.10	35.69	33.00	35.97	19.16	27.18	40.91	45.33	24.47	47.63	124.55	31.08	24.05	38.10	21.74	92.87	15.24	36.00	39.79	54.10	97.02	64.26	39.60	79.85	12.32	95.16	98.13
4	E1a_E2a	KnownJunction	0	34.80	29.96	40.81	25.45	21.07	23.63	9.55	20.40	22.29	34.79	9.87	24.31	42.80	27.41	17.34	14.08	20.24	29.28	8.09	45.98	23.54	60.09	52.75	61.91	30.16	55.06	6.11	38.87	39.32
5	I1	Intron	0	0.74	1.26	0.56	0.08	0.14	0.72	0.25	0.20	1.18	3.28	0.42	0.95	0.38	0.48	0.75	0.43	2.46	1.22	0.42	0.33	0.90	0.07	0.19	0.59	0.41	0.70	0.27	0.82	0.37
6	I1_SR1	SilentIntronRegion	0	0.74	1.26	0.56	0.08	0.14	0.72	0.25	0.20	1.18	3.28	0.42	0.95	0.38	0.49	0.75	0.43	2.46	1.22	0.42	0.33	0.90	0.07	0.20	0.59	0.41	0.70	0.27	0.82	0.37
7	I1	Intron	0	0.42	2.32	0.54	0.00	0.00	0.89	0.26	0.24	2.39	4.19	0.92	0.80	0.42	0.76	0.35	0.76	2.02	1.62	0.82	0.31	0.92	0.00	0.00	0.97	0.46	0.20	0.95	0.95	0.69
8	I1_SR1	SilentIntronRegion	0	0.61	3.12	0.64	0.00	0.00	0.92	0.39	0.35	2.14	4.00	1.25	0.65	0.37	1.04	0.52	1.11	2.14	1.47	0.61	0.45	0.95	0.00	0.00	1.23	0.55	0.30	0.87	1.25	1.02
9	I1_AR1	ActiveIntronRegion	0	0.00	0.65	0.34	0.00	0.00	0.83	0.00	0.00	2.93	4.64	0.24	1.12	0.52	0.18	0.00	0.00	1.80	1.93	1.28	0.00	0.86	0.00	0.00	0.43	0.29	0.00	1.10	0.33	0.00
10	E2_Aa	NovelBoundary	0	2.83	7.76	1.54	0.00	6.78	0.00	0.00	2.29	5.06	1.52	0.00	1.54	1.34	0.97	0.00	0.00	1.40	9.25	0.00	0.00	1.97	2.48	0.00	2.51	0.00	0.00	0.00	3.77	0.00
11	ER2a	ExonRegion	0	41.79	33.14	63.40	17.99	32.52	34.10	8.61	35.13	46.54	36.86	19.83	35.76	85.98	43.58	25.05	22.44	27.88	93.53	21.56	55.42	25.67	84.16	48.15	79.23	36.49	63.55	12.64	55.24	40.22
12	E2_Da	NovelBoundary	0	5.60	0.00	0.95	0.00	0.00	0.00	2.86	4.58	1.16	1.64	0.00	0.00	0.00	0.00	0.00	2.75	2.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
13	E2a_E3a	KnownJunction	0	58.34	55.75	85.48	48.53	40.09	45.70	21.63	63.40	98.70	49.49	41.76	68.55	183.36	77.35	34.08	55.69	50.29	140.76	24.28	66.57	53.51	144.15	81.71	179.27	67.28	49.82	20.92	75.98	73.65
14	I2_SR1	SilentIntronRegion	0	1.28	1.18	0.38	0.38	0.19	1.09	0.27	0.15	2.49	2.14	0.36	0.95	0.73	0.69	1.22	0.64	3.05	0.94	0.42	0.14	0.98	0.21	0.17	0.64	0.38	0.91	0.34	0.54	0.29
15	I2_AR2	ActiveIntronRegion	0	1.59	3.10	0.78	0.00	0.00	1.07	0.31	0.29	4.61	3.51	0.00	1.72	0.60	0.79	1.43	1.15	6.55	0.30	0.00	0.00	1.77	0.56	0.28	3.53	0.23	1.46	0.00	0.68	0.42
16	I2_SR2	SilentIntronRegion	0	1.76	2.93	0.51	0.72	0.00	2.18	0.00	0.37	4.49	5.65	1.00	2.44	1.11	1.23	4.18	1.29	4.97	1.17	0.65	0.28	1.66	0.18	0.91	1.19	2.02	0.94	0.74	1.48	0.55
17	I2_AR3	ActiveIntronRegion	0	0.76	1.29	0.67	0.00	0.00	0.17	0.00	0.00	4.24	1.30	2.71	4.89	4.69	1.45	3.31	1.83	6.59	0.11	0.00	0.00	1.40	0.00	0.00	2.17	1.15	1.93	0.00	5.24	1.05
18	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.37	0.00	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
19	ER3a	ExonRegion	0	50.00	57.54	73.90	20.71	42.61	51.86	21.05	46.75	66.28	72.25	54.03	72.40	129.73	66.91	47.07	47.55	51.02	119.37	45.59	48.85	50.54	78.20	125.87	98.48	58.07	74.31	23.68	104.28	67.78