Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF525	Gene	0	26.90	20.01	19.72	62.41	40.78	24.49	25.50	34.75	18.59	13.81	14.32	35.69	1.76	23.66	29.22	33.00	41.47	29.64	73.82	40.49	39.65	9.32	19.32	18.40	21.43	12.29	23.87	29.13	16.60
2	497729	Transcript	0	6.55	3.47	1.65	13.12	5.72	4.19	3.52	5.17	1.15	4.99	4.82	2.72	0.14	6.68	9.10	3.19	15.78	5.73	8.49	4.12	4.10	0.35	1.00	7.30	0.91	2.79	1.62	7.16	3.66
3	474037	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	491101	Transcript	0	1.85	0.00	0.60	0.00	0.90	0.81	2.86	0.33	0.00	0.39	0.43	1.11	0.00	0.66	0.90	0.68	1.15	3.07	3.43	0.00	0.77	0.00	0.00	1.71	0.39	0.56	0.00	1.31	1.96
5	467003	Transcript	0	4.04	5.96	4.80	10.69	6.30	4.35	3.90	4.93	3.40	1.92	2.44	7.54	0.28	3.63	7.12	5.94	7.78	3.89	14.60	7.32	11.26	1.56	5.07	4.94	4.59	0.71	4.51	4.66	4.81
6	475179	Transcript	0	0.00	0.00	3.54	0.00	0.00	0.00	20.14	1.99	6.27	3.91	10.50	2.59	0.00	3.06	0.00	2.91	4.86	4.62	8.09	0.00	0.00	4.52	2.02	2.21	0.00	2.19	2.24	2.29	6.67
7	396421	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	355326	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.71	0.00	0.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22
10	ER1b	ExonRegion	0	3.57	0.00	3.37	7.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.82	0.00	0.00	0.00	4.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.68
11	ER1c	ExonRegion	0	4.29	0.00	4.49	7.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.91	0.00	7.59	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	1.43	0.00	0.00	0.00	2.68
12	ER1d	ExonRegion	0	37.00	9.64	40.76	186.00	101.91	23.82	37.95	46.99	5.94	9.20	23.85	39.96	0.99	23.88	7.79	46.27	23.76	64.02	44.67	35.19	37.24	22.50	38.41	7.25	18.02	38.78	19.35	42.17	37.70
13	E1_Da	NovelBoundary	0	2.54	0.00	2.69	0.00	0.00	0.00	5.09	0.00	0.00	1.68	3.89	3.61	0.00	0.00	0.00	7.65	1.40	4.62	8.09	0.00	7.78	3.79	2.17	2.51	1.93	6.35	2.39	0.00	1.68
14	E1a_E2a	KnownJunction	0	76.68	23.07	68.86	376.81	238.15	56.63	93.32	88.28	13.19	27.84	35.56	71.93	1.97	48.35	16.14	83.84	43.26	83.22	32.37	60.87	82.43	44.63	78.26	23.51	42.24	85.44	50.89	93.28	67.35
15	E1a_E3a	KnownJunction	0	0.00	0.00	8.57	0.00	0.00	0.00	2.40	5.08	1.43	0.00	1.46	6.36	0.00	2.08	0.00	7.34	5.49	0.00	0.00	0.00	5.74	2.48	9.95	0.00	5.34	0.00	4.32	6.52	3.20
16	ER2a	ExonRegion	0	36.47	7.39	44.60	140.77	89.67	14.39	34.24	35.09	10.99	12.59	11.53	38.02	0.78	24.45	7.17	29.48	35.56	21.95	25.16	24.59	36.21	13.12	24.46	15.03	21.92	28.77	14.71	43.24	34.92
17	E2a_E4a	KnownJunction	0	11.21	0.00	0.00	0.00	6.04	3.80	0.00	2.19	3.11	0.00	3.16	4.76	0.00	3.66	8.37	6.73	2.34	4.62	0.00	0.00	0.00	4.38	0.00	2.75	7.31	0.00	20.08	0.00	1.82
18	E2a_E5a	NovelJunction	0	0.00	4.85	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E5c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.98	0.00
20	ER2b	ExonRegion	0	25.26	2.82	10.98	6.27	8.90	7.86	3.89	16.31	3.29	4.33	2.21	12.99	0.00	6.35	5.60	13.56	13.31	13.84	12.28	5.62	12.43	6.82	4.91	9.83	8.98	4.71	16.48	3.26	6.14
21	E3_Aa	NovelBoundary	0	16.99	0.00	1.22	0.00	7.37	0.00	0.00	9.85	4.54	5.55	0.00	3.43	0.00	4.45	8.17	0.00	16.34	4.62	0.00	0.00	1.97	0.00	0.00	8.31	0.00	0.00	0.00	0.00	12.05
22	ER3a	ExonRegion	0	1.09	3.17	6.04	6.65	0.00	0.00	1.47	3.18	0.33	0.00	0.32	2.27	0.00	1.72	0.00	3.73	4.95	0.20	2.72	0.00	2.72	2.43	4.70	0.47	1.82	0.00	0.33	2.31	1.88
23	E3_Da	NovelBoundary	0	5.37	0.00	3.71	0.00	0.00	6.87	0.00	2.24	6.46	7.43	5.73	10.69	1.75	5.52	0.00	7.65	21.20	5.39	0.00	0.00	3.69	0.00	0.00	0.00	0.00	0.00	0.00	5.66	1.82
24	E3a_E4a	KnownJunction	0	2.83	0.00	2.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.89	0.00	8.09	0.00	0.00	0.00	2.36	2.57	1.67	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	48.14	14.36	12.24	23.39	15.30	30.88	28.36	51.74	9.35	14.17	16.42	30.68	1.02	33.16	9.07	55.94	70.57	44.77	39.08	40.58	37.15	19.30	18.15	12.22	23.83	22.83	9.40	19.12	25.88
26	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.35	2.09	3.08	0.00	0.00	4.10	0.00	7.02	0.00	0.00	54.20	0.00	0.00	7.11	0.00	0.00	0.00	2.75	0.00	0.00	0.00	1.84	8.91
27	E4_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4b_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.84
29	E4b_E5a	KnownJunction	1	23.36	0.00	15.42	28.26	11.20	34.84	27.12	13.54	0.00	14.26	15.03	32.14	0.00	23.49	9.77	65.64	42.86	42.25	56.65	13.48	18.65	2.14	36.30	0.00	24.25	46.13	11.58	53.24	38.00
30	E4b_E5c	KnownJunction	0	0.00	0.00	3.54	0.00	0.00	0.00	20.14	1.99	6.27	3.91	10.50	2.59	0.00	3.06	0.00	2.91	4.86	4.62	8.09	0.00	0.00	4.52	2.02	2.21	0.00	2.19	2.24	2.29	6.67
31	ER4b	ExonRegion	0	60.02	29.56	26.93	65.81	24.91	50.86	58.46	57.07	10.11	34.65	57.13	58.13	1.30	72.56	50.41	103.76	159.27	73.69	99.57	39.35	45.64	12.62	43.40	27.96	35.73	66.01	38.46	96.17	76.50
32	ER4c	ExonRegion	0	6.55	3.47	1.65	13.12	5.72	4.19	3.52	5.17	1.15	4.99	4.82	2.72	0.14	6.68	9.10	3.19	15.78	5.73	8.49	4.12	4.10	0.35	1.00	7.30	0.91	2.79	1.62	7.16	3.66
33	E4_Ab	NovelBoundary	0	0.00	8.63	1.47	31.06	0.00	1.96	0.00	0.00	0.00	0.00	0.00	1.87	0.00	2.15	0.00	7.65	1.40	4.62	0.00	0.00	2.05	0.00	0.00	2.99	1.93	0.00	0.00	3.95	0.00
34	E4_Dc	NovelBoundary	0	3.01	0.00	1.54	0.00	0.00	3.22	0.00	0.00	0.00	0.00	3.23	0.00	0.00	1.77	0.00	0.00	7.14	10.02	16.18	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
35	ER4d	ExonRegion	0	2.14	2.37	0.25	13.00	0.00	1.68	1.90	0.00	0.00	0.00	0.53	0.00	0.00	1.26	0.00	0.00	2.28	6.67	9.55	0.00	0.00	0.00	0.00	2.87	0.08	0.79	0.00	0.45	1.79
36	ER4e	ExonRegion	0	3.69	0.00	1.20	0.00	1.80	1.62	1.08	0.66	0.00	0.78	0.85	2.22	0.00	1.32	1.81	1.36	2.31	6.15	6.86	0.00	1.53	0.00	0.00	3.42	0.78	1.12	0.00	2.63	1.07
37	E4_Dd	NovelBoundary	0	0.00	0.00	1.45	0.00	0.00	0.00	0.00	4.78	0.00	5.63	0.00	4.55	0.00	0.00	0.00	10.10	4.03	0.00	32.15	0.00	0.00	0.00	0.00	5.50	3.60	0.00	0.00	1.66	1.45
38	I4	Intron	0	3.52	1.95	0.95	4.57	4.26	1.89	2.03	1.11	1.86	0.68	0.48	1.78	0.04	1.94	2.31	1.64	3.36	2.76	6.97	1.27	4.74	0.06	0.12	1.73	0.29	0.21	0.31	1.04	0.38
39	I4_SR1	SilentIntronRegion	0	3.02	2.15	1.24	3.73	4.35	1.63	1.20	1.50	1.71	0.96	0.89	1.74	0.10	1.68	2.53	1.97	2.55	2.93	6.17	1.58	5.72	0.13	0.27	1.92	0.21	0.00	0.68	0.73	0.60
40	I4_AR1	ActiveIntronRegion	0	1.68	0.00	0.00	12.19	0.00	0.00	0.74	0.00	0.00	0.00	0.00	1.05	0.00	0.79	0.00	0.00	0.87	1.91	5.43	0.00	4.54	0.00	0.00	0.00	0.00	0.94	0.00	0.00	0.00
41	I4_SR2	SilentIntronRegion	0	4.12	1.91	0.77	4.74	4.52	2.27	2.87	0.85	2.15	0.48	0.16	1.88	0.00	2.27	2.31	1.48	4.27	2.67	7.80	1.09	3.88	0.00	0.00	1.71	0.38	0.34	0.00	1.40	0.22
42	E5_Aa	NovelBoundary	0	2.36	11.92	1.32	7.98	0.00	3.91	2.92	0.00	1.19	3.52	0.00	0.00	0.00	7.00	6.98	3.82	7.20	0.00	24.28	0.00	5.70	0.00	0.00	2.99	0.00	0.00	0.00	4.27	0.00
43	ER5a	ExonRegion	0	30.89	15.60	24.25	76.57	47.72	33.56	23.50	32.40	9.79	22.57	20.63	33.03	0.56	26.36	13.22	42.84	41.06	35.77	85.79	49.96	38.82	9.56	22.73	7.33	21.50	11.71	25.10	33.78	9.83
44	E5_Ab	KnownBoundary	0	88.54	55.16	37.95	217.20	250.53	90.16	143.32	114.91	38.07	115.84	179.68	108.19	11.02	112.78	92.48	155.52	105.97	28.51	72.83	127.94	107.90	32.72	55.26	46.96	94.22	44.50	129.71	107.61	46.32
45	ER5b	ExonRegion	0	38.82	13.47	18.91	64.89	42.43	21.92	24.12	32.29	8.75	12.68	15.54	37.52	0.78	27.95	14.18	40.68	50.19	32.00	80.07	45.65	39.56	9.68	21.62	10.50	29.00	10.92	27.57	28.79	13.92
46	E5_Da	KnownBoundary	0	17.58	9.11	33.14	88.22	89.75	39.94	18.19	44.99	44.22	45.18	48.15	112.20	4.90	68.46	27.31	76.19	163.37	50.86	56.65	55.49	59.44	11.04	31.57	19.20	39.51	6.01	27.18	27.54	41.80
47	ER5c	ExonRegion	0	30.76	23.42	23.76	69.19	49.42	27.04	30.48	40.40	17.01	15.93	13.91	39.93	1.40	29.85	26.85	37.11	50.82	36.70	85.67	48.97	45.19	10.50	27.34	15.42	26.21	14.12	22.63	34.33	16.00
48	E5_Db	KnownBoundary	0	53.15	95.01	60.84	171.69	146.34	165.48	100.35	96.65	100.86	100.18	182.34	78.52	28.79	73.52	131.75	110.92	98.86	43.15	169.27	127.03	117.72	40.64	49.10	85.54	78.65	52.48	125.88	52.52	81.74
49	ER5d	ExonRegion	0	14.67	20.31	6.14	44.98	31.49	18.22	14.94	14.26	13.83	8.26	9.45	27.94	1.40	11.40	27.65	16.51	19.97	17.67	55.40	34.01	42.72	2.89	8.33	16.28	10.78	3.57	15.93	11.09	12.24
50	E5_Ac	KnownBoundary	0	28.61	49.06	5.01	60.39	25.64	28.97	17.39	11.45	26.25	40.70	15.31	74.34	6.59	35.07	18.34	45.90	84.12	4.62	137.12	42.18	76.33	0.00	8.86	45.52	41.03	3.48	9.39	17.79	20.01
51	ER5e	ExonRegion	0	26.54	27.92	23.66	71.28	41.73	29.00	32.33	47.75	38.88	14.30	18.13	46.63	4.12	24.15	58.85	36.65	45.40	28.56	88.95	41.21	46.08	12.14	16.52	37.74	23.98	15.82	37.72	36.66	26.70
52	ER5f	ExonRegion	0	1.61	6.30	0.65	1.83	0.00	3.55	0.67	2.15	1.40	1.32	0.99	1.13	0.00	2.95	7.93	2.11	4.59	1.59	6.79	2.58	5.11	0.00	0.00	5.38	3.34	0.00	1.98	3.40	6.71