Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF677	Gene	0	1.77	1.63	0.54	0.96	1.05	2.29	0.93	0.85	1.88	2.54	0.55	0.76	0.88	1.58	3.65	1.65	1.56	2.73	9.10	1.45	1.66	1.42	1.02	3.67	1.95	1.90	1.02	1.72	1.16
2	333952	Transcript	0	2.30	2.31	2.77	3.27	1.39	4.57	2.54	1.75	2.71	4.76	0.98	1.74	2.64	6.38	5.03	4.12	3.18	5.40	21.02	1.29	1.48	4.70	3.95	8.31	3.44	2.78	3.38	0.18	4.98
3	416063	Transcript	0	0.16	0.25	0.13	0.28	0.00	0.21	0.31	0.07	0.09	0.39	0.00	0.14	0.00	0.56	0.22	0.00	0.35	0.21	1.04	0.22	0.27	0.49	0.21	0.50	0.33	0.00	0.35	0.00	0.21
4	ER1a	ExonRegion	0	3.16	1.07	3.67	2.19	1.74	4.16	1.86	2.49	3.17	4.04	0.95	1.98	5.36	5.99	7.00	6.58	3.53	5.53	33.94	0.00	1.25	7.44	5.33	8.82	0.89	3.89	1.05	0.00	5.57
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	5.79	10.19	0.00	0.00
6	E1a_E2a	KnownJunction	0	10.62	4.27	9.34	9.27	6.63	15.65	7.44	6.82	9.90	17.30	3.95	5.45	11.94	16.35	16.74	20.43	7.25	18.37	72.61	0.00	6.78	16.63	16.10	24.58	6.40	12.92	4.52	0.00	14.49
7	I1_AR1	ActiveIntronRegion	0	6.05	1.40	1.46	0.00	1.06	9.25	3.51	1.20	3.42	2.52	0.52	0.27	0.71	3.25	4.40	1.62	1.30	1.82	5.57	2.67	4.04	5.09	1.97	2.34	3.10	3.73	0.80	0.36	1.58
8	ER2a	ExonRegion	0	4.74	3.79	7.48	6.18	2.53	12.20	5.31	3.63	8.10	13.16	2.88	5.05	5.84	20.34	16.64	8.77	10.88	12.03	33.27	3.17	3.66	10.66	10.57	24.09	11.01	5.71	19.91	0.00	17.43
9	E2a_E3b	KnownJunction	0	0.00	9.31	4.16	10.78	0.00	7.40	7.72	2.04	1.22	5.75	0.00	2.44	0.00	13.89	0.00	0.00	5.83	10.02	40.46	6.78	0.00	6.86	2.51	12.92	10.57	0.00	3.98	0.00	6.67
10	ER3a	ExonRegion	0	0.16	0.25	0.13	0.28	0.00	0.21	0.31	0.07	0.09	0.39	0.00	0.14	0.00	0.56	0.22	0.00	0.35	0.21	1.04	0.22	0.27	0.49	0.21	0.50	0.33	0.00	0.35	0.00	0.21
11	ER3b	ExonRegion	0	3.51	4.62	4.29	2.86	0.00	15.30	3.77	0.93	4.93	7.99	0.00	2.49	0.00	13.43	3.25	3.34	3.57	10.05	33.98	4.73	5.95	15.70	4.09	13.53	9.57	1.96	1.33	0.85	1.58
12	E3a_E4a	KnownJunction	0	5.31	12.51	6.60	0.00	0.00	10.55	0.00	2.54	2.77	5.39	0.00	1.42	0.00	19.48	0.00	7.42	2.03	4.62	72.61	11.08	0.00	22.27	4.43	29.73	14.06	4.29	2.39	2.07	0.00
13	ER4a	ExonRegion	0	5.33	11.01	3.51	0.00	1.62	27.18	8.69	2.13	6.76	15.92	2.76	3.73	6.01	20.75	9.49	10.34	9.52	12.23	66.68	12.70	8.50	22.48	8.57	28.90	16.03	7.45	10.13	0.70	9.24
14	E4_Da	NovelBoundary	0	0.00	0.00	1.22	0.00	0.00	12.16	0.00	0.00	6.09	3.40	1.61	2.89	0.00	9.44	0.00	3.82	5.15	4.62	8.09	4.13	0.00	2.19	0.00	0.00	5.80	0.00	0.00	0.00	2.94
15	E4a_E5a	KnownJunction	0	0.00	9.21	3.69	0.00	0.00	12.55	7.44	0.00	0.00	3.52	0.00	4.46	0.00	5.58	0.00	6.81	5.63	13.87	24.28	7.36	0.00	20.71	1.82	0.00	9.89	0.00	10.83	0.00	0.00
16	I4	Intron	0	2.27	4.09	2.88	1.90	0.81	9.18	1.13	0.61	2.22	8.41	2.56	1.02	0.34	6.57	0.52	3.32	3.21	4.81	21.13	3.66	3.07	1.91	3.47	7.75	3.55	1.92	4.30	0.00	2.13
17	I4_AR1	ActiveIntronRegion	0	2.16	3.67	2.76	2.07	0.88	9.68	1.16	0.53	2.25	8.20	2.69	1.00	0.37	6.24	0.56	3.51	3.32	4.74	20.88	3.58	3.13	1.81	3.44	7.41	3.44	1.75	4.60	0.00	2.19
18	I4_AR3	ActiveIntronRegion	0	3.64	9.20	4.26	0.00	0.00	3.51	0.86	1.56	1.91	11.04	1.01	1.31	0.00	10.57	0.00	1.05	1.90	5.73	24.44	4.68	2.41	3.06	3.84	11.87	4.86	4.01	0.78	0.00	1.42
19	ER5a	ExonRegion	0	2.27	1.78	0.73	1.27	0.94	2.68	1.29	1.24	2.73	3.21	0.73	1.00	1.23	1.75	5.07	2.27	2.41	3.60	13.38	2.00	2.29	1.36	1.23	4.98	2.47	2.70	1.11	2.86	1.47
20	E5_Da	KnownBoundary	0	0.00	4.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00
21	ER5b	ExonRegion	0	0.00	0.21	0.00	0.00	0.00	0.35	0.01	0.01	0.06	0.22	0.00	0.00	0.00	0.18	1.05	0.13	0.30	0.30	3.07	0.00	0.29	0.00	0.08	1.09	0.87	0.80	0.46	0.00	0.00
22	E5_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.50	0.00	0.00	0.00	0.00	2.29	0.00	0.00	1.86	0.00	0.00	0.00	1.91
23	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E6_Aa	NovelBoundary	0	96.56	48.96	89.54	74.63	0.00	86.63	56.36	90.77	170.11	95.07	47.52	94.00	69.99	121.91	86.11	68.85	370.59	8.99	0.00	80.80	88.04	67.38	81.85	73.99	79.26	160.46	92.54	122.44	102.44
25	ER6a	ExonRegion	0	1.83	1.61	0.24	1.02	1.59	1.37	0.54	0.76	1.49	2.11	0.42	0.63	0.62	0.64	3.11	1.22	0.85	2.38	4.76	0.96	1.38	0.69	0.62	1.92	1.22	1.45	0.52	1.62	0.69
26	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.74	0.00	0.00	0.00	0.00	0.00
27	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E7_Aa	NovelBoundary	0	225.03	184.40	208.36	193.26	143.69	193.56	209.12	170.90	362.14	317.93	115.85	210.69	191.26	354.08	264.30	185.74	824.45	9.12	8.09	145.72	270.46	161.94	172.87	243.63	218.11	325.59	146.71	371.13	209.80
29	ER7a	ExonRegion	0	0.35	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.46	0.24	0.58	0.10	0.00	0.00	0.76	0.00	0.00	0.00	1.05	0.68	0.00	0.00	0.30	1.41	0.00	0.26	0.00	0.00	0.00