Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF665	Gene	0	7.08	4.91	11.18	16.00	4.24	6.69	8.43	9.16	7.93	5.37	10.20	16.48	1.83	16.69	4.31	8.73	20.48	9.53	26.93	9.21	13.55	3.80	2.89	10.40	13.51	9.57	12.41	15.82	8.81
2	396424	Transcript	0	13.31	7.45	24.22	157.02	1.29	10.14	27.81	15.00	5.53	4.32	22.46	20.91	0.56	18.05	0.66	18.45	26.04	18.31	27.66	14.57	8.85	1.99	7.22	10.41	18.56	25.42	28.71	35.53	13.85
3	IG30_SR4	SilentIntergenicRegion	0	0.29	2.16	0.78	0.96	0.98	0.92	0.00	0.62	2.21	1.45	0.56	3.14	0.00	0.76	0.62	2.45	5.60	2.11	1.50	1.11	1.43	0.24	0.00	0.86	0.48	0.00	0.25	0.55	1.48
4	IG30_AR2	ActiveIntergenicRegion	0	0.80	5.58	0.00	0.00	0.00	16.75	3.70	13.90	4.97	0.00	8.94	1.18	0.00	16.16	0.00	0.00	6.87	26.64	16.29	0.00	0.00	6.67	11.89	5.38	19.21	4.01	1.17	6.72	12.90
5	IG30_AR1	ActiveIntergenicRegion	0	19.40	10.50	35.69	67.69	4.92	13.09	22.19	18.81	14.26	13.35	34.74	23.14	1.29	22.67	3.68	31.08	59.72	40.56	21.50	15.35	16.89	7.77	13.17	8.22	20.83	14.74	12.60	21.73	43.01
6	ER1a	ExonRegion	0	17.34	7.17	28.93	247.97	4.53	9.32	30.27	17.34	4.92	3.62	27.03	19.21	0.00	10.59	0.00	24.53	22.60	26.60	32.67	15.79	5.29	0.43	9.76	7.67	15.49	23.69	35.27	41.43	15.74
7	E1_Da	NovelBoundary	0	22.12	0.00	5.43	116.26	0.00	15.16	46.06	6.82	7.13	13.70	2.97	12.92	0.00	16.42	0.00	40.47	36.87	27.74	0.00	3.97	9.91	4.81	6.89	3.05	12.65	26.86	0.00	19.23	34.47
8	E1a_E2a	KnownJunction	0	42.00	18.42	70.33	688.06	0.00	30.81	108.88	43.30	18.94	13.94	75.32	50.81	0.00	36.71	0.00	67.32	69.13	55.48	56.65	46.39	17.89	4.81	26.05	20.28	40.58	74.37	109.38	130.08	50.77
9	I1	Intron	0	7.84	0.90	2.23	4.78	0.28	1.39	2.50	1.47	1.38	2.26	1.07	2.40	0.15	3.20	0.18	2.46	10.36	3.30	2.56	1.31	1.66	0.24	0.48	2.05	1.88	2.04	0.84	1.52	0.85
10	I1_AR1	ActiveIntronRegion	0	9.52	0.02	1.69	7.23	0.45	1.14	3.70	0.68	0.57	1.99	1.44	3.20	0.36	3.16	0.17	3.06	10.09	4.15	1.33	2.15	1.31	0.50	0.62	1.51	0.92	2.88	0.00	2.39	1.04
11	I1_SR1	SilentIntronRegion	0	7.41	1.14	2.38	4.14	0.24	1.46	2.18	1.68	1.59	2.33	0.97	2.19	0.09	3.21	0.18	2.31	10.43	3.08	2.88	1.09	1.75	0.17	0.45	2.19	2.13	1.82	1.06	1.30	0.81
12	E2_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	3.30	0.00	2.54	3.11	5.11	0.00	1.42	0.00	2.70	0.00	3.37	14.63	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	17.22	7.06	45.84	150.52	0.00	10.15	36.45	14.48	5.97	2.82	20.87	22.37	0.00	16.15	0.00	20.03	37.36	13.05	13.50	12.98	7.18	1.14	7.96	10.83	15.37	28.37	36.54	43.85	15.64
14	E2a_E3a	KnownJunction	0	2.42	0.00	8.97	0.00	0.00	9.48	2.92	4.78	0.00	0.00	4.30	3.19	0.00	6.82	0.00	0.00	7.86	0.00	0.00	0.00	0.00	0.00	0.00	14.59	11.10	16.95	4.27	4.58	0.00
15	Ix_AR2	ActiveIntronRegion	0	4.76	0.52	6.17	2.42	0.00	0.62	4.90	6.31	0.51	1.86	0.67	3.65	0.29	5.13	0.00	1.04	7.68	1.49	4.30	3.92	1.61	0.41	0.61	1.21	4.75	2.30	1.13	1.05	0.15
16	Ix_SR2	SilentIntronRegion	0	3.91	0.86	7.55	3.23	0.00	0.93	5.50	4.77	4.11	1.57	4.20	3.77	0.29	5.00	0.69	1.30	11.12	3.42	6.00	4.16	2.03	0.00	0.27	3.88	4.23	2.24	4.60	1.13	1.30
17	Ix_AR1	ActiveIntronRegion	0	1.44	0.96	1.37	6.41	0.00	1.84	2.86	0.41	2.59	0.32	0.71	2.48	0.00	1.95	0.41	2.25	6.79	3.02	5.72	4.61	1.38	0.13	0.00	1.44	0.96	0.35	0.96	1.09	0.84
18	ER3a	ExonRegion	0	4.78	7.42	3.80	2.88	0.00	2.55	2.86	8.73	0.52	0.30	6.28	9.61	0.68	15.91	0.00	2.69	10.33	5.20	14.90	6.48	6.39	1.22	1.69	6.03	15.26	7.20	1.01	2.04	3.29
19	E3_Da	NovelBoundary	0	0.00	0.00	0.00	9.06	0.00	0.00	5.66	2.14	0.00	0.00	0.00	1.78	0.00	0.00	0.00	3.82	2.14	0.00	0.00	4.05	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00
20	E3a_E4a	KnownJunction	0	2.65	7.37	1.17	0.00	0.00	1.92	5.55	7.42	0.00	3.87	13.60	24.61	1.31	23.31	0.00	6.12	14.47	18.49	48.33	11.25	11.11	2.29	2.36	2.87	18.75	18.32	2.53	11.37	2.74
21	ER4a	ExonRegion	0	6.79	4.72	10.48	9.71	4.49	6.75	7.72	8.93	8.33	5.66	9.85	16.60	1.94	16.84	4.65	8.47	20.53	9.34	27.59	9.13	14.12	4.02	2.71	10.63	13.37	9.05	11.99	15.38	8.78