Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C19orf48	Gene	0	71.35	34.22	122.21	163.19	279.72	34.65	83.32	263.84	35.41	44.35	80.69	96.22	124.41	16.28	29.03	29.24	33.34	51.79	72.23	40.48	28.93	75.34	95.49	26.39	31.79	62.70	41.69	86.62	49.22
2	391812	Transcript	0	42.60	11.12	9.40	54.44	34.06	8.54	13.79	118.21	17.37	16.47	18.95	18.09	19.00	4.58	8.34	8.43	8.18	12.34	15.82	10.68	13.34	29.00	8.19	8.44	18.85	22.57	18.13	9.71	6.13
3	345523	Transcript	0	632.50	371.03	127.94	1447.73	3502.72	260.94	747.85	2316.00	230.89	275.42	793.71	427.91	531.67	97.64	338.44	314.95	77.14	878.72	1204.43	448.73	187.76	892.86	609.22	259.00	303.91	574.53	413.68	929.00	230.57
4	391811	Transcript	0	517.65	205.31	509.42	921.39	1860.61	202.08	539.21	1676.30	205.04	249.77	459.38	402.61	552.73	86.62	170.82	191.07	143.75	395.73	547.63	255.77	166.89	604.82	564.18	155.96	200.11	350.47	235.35	551.77	242.26
5	418173	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	IG9_SR2	SilentIntergenicRegion	0	1.04	0.00	0.81	0.00	0.00	0.00	0.00	3.58	1.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.65
7	IG9_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	2.81
8	ER1a	ExonRegion	0	0.00	0.00	0.00	4.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.21	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	80.40	42.75	92.52	199.28	310.70	45.28	95.46	284.72	55.96	61.14	83.75	83.16	109.27	17.72	29.18	46.93	32.19	75.31	87.92	46.66	41.46	102.44	90.21	31.55	34.41	75.55	49.48	97.43	48.10
10	E1_Da	NovelBoundary	0	2.60	0.00	1.22	0.00	0.00	3.30	4.75	13.14	5.88	1.64	1.58	9.22	1.46	2.75	0.00	0.00	0.00	0.00	0.00	0.00	3.29	2.04	1.97	2.27	0.00	1.76	8.20	1.98	0.00
11	E1a_E2a	KnownJunction	0	22.12	16.87	12.51	82.18	63.81	7.94	11.96	75.30	18.24	25.96	42.39	27.23	23.85	4.63	8.37	16.60	12.74	15.41	16.18	10.75	12.23	16.92	13.25	5.26	20.04	30.98	54.07	18.87	5.71
12	E1a_E3b	KnownJunction	0	632.50	371.03	127.94	1447.73	3502.72	260.94	747.85	2316.00	230.89	275.42	793.71	427.91	531.67	97.64	338.44	314.95	77.14	878.72	1204.43	448.73	187.76	892.86	609.22	259.00	303.91	574.53	413.68	929.00	230.57
13	I1	Intron	0	8.70	11.84	4.76	8.17	4.42	9.58	6.01	15.67	7.64	7.79	5.86	14.54	10.17	2.97	4.90	2.95	6.90	5.48	11.35	1.72	9.22	0.85	4.91	2.45	5.60	6.90	1.84	5.90	3.54
14	I1_SR1	SilentIntronRegion	0	3.22	0.00	0.00	0.00	0.00	4.81	1.18	5.22	0.66	0.00	0.00	1.96	0.76	0.00	0.00	0.00	1.42	0.00	7.17	2.11	5.11	1.50	0.00	0.00	0.00	11.92	2.29	13.45	1.34
15	I1_AR1	ActiveIntronRegion	0	1.96	0.00	0.89	3.97	0.00	3.17	5.35	4.42	2.41	3.11	1.32	7.18	6.54	1.05	0.00	0.00	4.50	2.17	2.61	1.28	4.87	0.80	4.01	1.31	0.33	10.64	1.73	10.90	0.57
16	I1_SR2	SilentIntronRegion	0	6.67	2.77	2.91	6.09	3.79	5.66	4.24	13.85	4.41	5.52	3.22	11.87	6.32	2.11	3.19	1.58	7.18	3.45	2.76	1.76	6.40	1.25	4.50	1.28	1.88	5.75	1.32	5.60	2.33
17	I1_AR2	ActiveIntronRegion	0	12.17	20.95	8.15	12.63	6.15	12.62	6.57	20.72	12.54	9.26	10.11	25.33	20.31	4.76	11.01	4.49	11.23	5.48	15.39	2.68	12.73	0.55	6.33	3.74	8.62	12.46	3.41	8.77	8.08
18	I1_SR3	SilentIntronRegion	1	10.22	19.13	5.59	8.72	4.96	13.54	7.99	16.90	9.44	10.57	7.22	12.43	9.11	3.26	4.01	4.18	4.39	8.59	20.57	1.12	11.21	0.55	4.77	3.27	9.15	3.89	1.46	3.33	2.65
19	E2_Aa	NovelBoundary	0	57.81	44.60	26.66	39.26	0.00	48.15	18.65	34.84	74.55	55.72	41.35	32.68	38.98	38.15	43.45	23.94	66.38	0.00	8.09	37.63	40.55	16.43	20.49	28.05	30.16	31.84	8.70	36.98	20.27
20	ER2a	ExonRegion	0	29.13	14.89	20.90	45.74	27.48	13.52	13.10	86.06	20.38	18.98	21.58	26.33	22.63	5.87	17.43	9.46	14.83	19.32	23.05	9.15	14.72	18.81	9.70	9.35	17.76	25.76	16.01	16.05	6.40
21	E2_Da	NovelBoundary	0	5.66	13.19	5.26	8.84	0.00	12.89	2.63	14.98	11.66	4.07	3.23	7.41	6.43	4.65	0.00	3.14	11.97	0.00	8.09	0.00	4.09	0.00	7.09	8.61	5.23	6.44	2.53	2.29	1.65
22	E2a_E3b	KnownJunction	1	119.15	12.70	4.19	84.98	44.95	12.70	30.09	311.48	30.88	20.93	11.83	18.79	29.52	7.82	7.57	7.65	5.13	14.64	24.05	22.82	26.39	80.27	8.62	19.14	37.58	33.52	2.44	3.91	12.41
23	I2	Intron	0	0.00	2.38	0.00	0.00	0.00	4.06	0.00	9.53	1.66	0.00	0.00	0.91	0.00	0.00	0.00	3.67	0.00	5.70	9.45	0.00	0.00	0.00	0.00	0.00	0.00	2.32	5.41	0.00	0.00
24	I2_AR1	ActiveIntronRegion	0	0.00	2.45	0.00	0.00	0.00	4.19	0.00	9.78	1.71	0.00	0.00	0.94	0.00	0.00	0.00	3.74	0.00	5.87	9.73	0.00	0.00	0.00	0.00	0.00	0.00	2.39	5.58	0.00	0.00
25	E3_Aa	NovelBoundary	0	2.77	0.00	4.19	0.00	6.19	1.46	2.12	13.69	6.43	0.00	2.91	8.70	2.96	2.95	0.00	0.00	7.50	0.00	0.00	0.00	3.69	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00
26	E3_Ab	NovelBoundary	0	5.19	8.53	0.00	0.00	0.00	5.49	2.17	4.18	1.46	2.04	0.00	0.00	0.00	0.89	0.00	0.00	1.37	0.00	0.00	0.00	2.01	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	517.65	205.31	509.42	921.39	1860.61	202.08	539.21	1676.30	205.04	249.77	459.38	402.61	552.73	86.62	170.82	191.07	143.75	395.73	547.63	255.77	166.89	604.82	564.18	155.96	200.11	350.47	235.35	551.77	242.26
28	ER3b	ExonRegion	0	1035.41	431.14	1196.97	2156.14	4382.14	453.06	1144.74	3552.59	400.93	558.52	1127.24	1036.57	1404.66	199.44	371.88	376.95	311.39	686.59	979.50	579.56	353.53	1214.91	1297.47	361.39	448.88	795.28	550.83	1358.92	588.37
29	E3_Da	NovelBoundary	0	0.00	0.00	1.52	9.27	0.00	1.96	0.00	0.00	3.14	0.00	0.00	2.98	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	2.01	0.00	2.07	0.00	1.55	0.00	0.00	4.22	0.00
30	E3a_E4a	KnownJunction	1	307.67	186.14	1492.70	1036.83	1879.72	191.61	353.70	1203.79	310.13	245.86	507.92	946.94	1156.56	143.26	141.32	103.73	379.17	146.28	226.36	229.57	161.48	281.79	474.82	170.71	184.96	312.97	206.64	606.80	493.35
31	E3a_E5a	NovelJunction	0	3.01	8.73	43.43	31.71	20.34	1.57	12.64	11.40	10.20	3.75	22.68	15.51	18.82	1.02	0.00	0.00	6.39	4.62	0.00	0.00	2.05	4.23	18.12	0.00	0.00	4.03	0.00	14.92	5.15
32	I3_SR1	SilentIntronRegion	0	1.56	4.04	2.44	0.00	0.00	2.00	0.00	0.00	2.86	1.05	2.17	2.69	1.65	0.82	1.68	0.00	1.09	0.82	1.16	1.00	2.60	0.00	0.00	1.57	1.55	1.72	1.33	3.56	0.00
33	I3_AR1	ActiveIntronRegion	0	2.78	7.31	0.78	1.65	0.76	0.51	1.40	2.06	4.53	3.32	1.18	2.19	1.59	0.34	0.56	0.31	1.30	0.48	6.28	0.00	3.09	0.39	0.45	0.75	1.33	0.74	0.00	1.21	0.74
34	I3_SR2	SilentIntronRegion	0	1.42	3.85	1.65	0.08	0.68	2.58	1.20	1.57	3.42	1.57	2.77	2.55	2.14	0.25	1.33	0.81	1.05	2.60	3.01	0.00	3.21	0.33	0.87	1.65	0.75	1.37	0.00	0.98	0.59
35	I3_AR2	ActiveIntronRegion	0	5.33	3.70	0.96	0.00	0.00	2.49	0.29	3.53	0.97	1.24	1.03	2.38	1.68	0.52	0.00	1.20	0.49	1.17	0.66	0.00	3.39	0.25	1.56	0.51	0.00	0.30	0.53	1.29	0.00
36	I3	Intron	0	1.30	0.00	0.00	0.00	0.00	0.83	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.55	3.33	1.51	0.91	0.00	0.00	0.00	1.73	1.09	1.10	0.00	0.00	0.00	1.11	0.99	0.00
37	I3_SR1	SilentIntronRegion	0	1.56	0.00	0.00	0.00	0.00	0.92	1.47	0.00	0.00	0.00	0.00	0.00	0.00	0.62	3.68	1.81	0.96	0.00	0.00	0.00	2.00	1.31	1.32	0.00	0.00	0.00	1.26	1.19	0.00
38	E4_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	5.68	0.00	0.00	0.00	0.00	2.85	0.00	2.74	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00
39	E4_Ab	NovelBoundary	1	90.66	77.75	319.91	277.16	377.12	69.06	100.93	439.68	85.91	85.08	145.11	286.68	357.80	41.92	79.73	23.26	82.52	55.48	137.57	24.23	36.58	46.67	138.79	39.72	66.91	84.71	46.57	197.47	147.60
40	ER4a	ExonRegion	0	264.26	149.23	1216.38	750.77	1284.53	167.58	311.39	1083.87	208.92	226.60	399.65	701.20	925.02	110.01	124.28	80.86	293.93	103.45	201.51	148.30	126.00	231.69	429.42	136.14	154.84	255.43	166.67	510.12	386.16
41	ER4b	ExonRegion	0	92.37	49.20	277.52	133.50	211.19	50.13	106.83	508.52	76.97	68.06	129.36	242.31	305.72	46.70	50.41	20.36	91.60	62.14	103.25	48.17	34.70	49.51	133.81	69.44	45.47	113.01	80.16	140.18	126.82
42	E4_Da	NovelBoundary	0	37.57	20.55	11.44	21.57	0.00	9.21	12.59	42.65	13.28	16.74	12.69	18.13	9.46	1.93	16.94	3.29	12.18	23.12	0.00	3.47	2.05	6.37	2.46	21.83	12.84	13.65	8.20	6.20	0.00
43	E4a_E5a	KnownJunction	0	91.13	19.97	73.08	68.37	155.77	29.31	107.33	468.30	64.16	53.25	81.02	134.40	154.67	45.78	8.37	20.88	44.46	47.78	129.48	66.74	29.08	47.79	121.94	69.57	38.91	97.72	93.88	105.90	48.76
44	I4	Intron	1	31.32	18.83	1.48	8.55	11.68	9.43	21.64	19.77	20.40	17.65	13.49	6.78	4.45	5.54	16.44	5.92	11.13	17.33	41.92	4.70	13.61	2.69	5.93	10.91	6.82	7.97	2.18	8.26	7.94
45	I4_AR1	ActiveIntronRegion	1	31.70	19.05	1.49	8.65	11.82	9.54	21.90	20.00	20.64	17.86	13.65	6.87	4.50	5.60	16.64	5.99	11.26	17.54	42.42	4.74	13.77	2.72	6.00	11.04	6.90	8.06	2.21	8.36	8.04
46	I4	Intron	0	10.63	6.20	0.00	15.23	13.84	13.63	4.28	11.74	7.96	3.07	2.53	3.50	0.92	1.93	0.00	3.51	0.00	13.65	9.05	1.95	4.04	1.28	0.00	9.14	1.01	1.11	0.00	0.00	5.70
47	I4_AR1	ActiveIntronRegion	0	10.90	6.38	0.00	15.67	14.23	14.02	4.41	12.07	8.17	3.16	2.60	3.60	0.95	1.98	0.00	3.62	0.00	14.04	9.31	1.97	4.16	1.31	0.00	9.37	1.04	1.15	0.00	0.00	5.87
48	E5_Aa	NovelBoundary	0	70.07	25.21	13.90	18.77	27.26	12.43	63.28	64.10	53.63	25.65	23.60	21.54	17.86	19.48	34.28	22.80	22.06	33.13	56.65	19.60	16.69	9.92	8.72	16.33	6.71	19.14	16.15	25.84	22.75
49	ER5a	ExonRegion	0	40.49	20.43	80.35	100.93	161.39	19.87	51.94	155.63	18.82	25.20	47.12	61.29	78.36	8.92	17.09	17.92	20.52	31.38	44.00	24.29	17.00	40.76	61.34	13.85	17.27	37.35	24.24	44.40	29.16
50	IG8	Intergenic	0	1.11	0.74	0.96	0.00	3.99	1.01	0.66	3.56	1.48	1.57	1.81	6.12	3.79	0.55	1.37	0.32	1.42	1.70	2.00	0.45	1.98	0.93	1.67	1.93	0.62	1.92	3.14	7.68	1.31
51	IG8_SR1	SilentIntergenicRegion	0	1.12	0.75	0.96	0.00	4.02	1.02	0.66	3.59	1.49	1.58	1.83	6.17	3.83	0.56	1.39	0.32	1.43	1.72	2.02	0.45	2.00	0.94	1.69	1.95	0.63	1.94	3.17	7.75	1.32