Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF175	Gene	0	19.46	70.83	28.62	21.92	33.48	29.75	23.18	12.45	30.31	48.59	72.67	42.67	23.77	47.13	16.98	27.98	72.49	29.36	43.20	19.85	32.10	12.26	18.36	48.44	32.94	22.65	37.64	18.86	36.98
2	262259	Transcript	0	17.54	39.19	25.85	17.76	22.55	20.52	11.89	20.20	12.50	36.78	42.16	24.24	13.52	35.68	8.28	21.16	50.02	17.49	21.41	21.48	19.04	15.78	17.32	24.33	20.19	17.99	14.47	13.48	20.62
3	IG43_AR2	ActiveIntergenicRegion	0	4.01	9.38	0.00	1.72	0.00	0.00	0.79	3.09	1.79	7.83	1.99	0.73	0.00	0.65	0.00	4.27	4.92	0.00	0.89	0.00	3.06	0.00	0.43	1.55	0.68	1.92	0.00	0.39	1.29
4	IG43_AR3	ActiveIntergenicRegion	0	0.71	8.05	1.78	4.57	0.00	0.00	0.56	3.57	1.09	5.81	0.21	0.49	0.42	0.00	0.00	5.76	3.79	0.00	0.53	0.00	2.39	0.73	0.38	7.41	0.00	0.58	0.00	0.00	0.98
5	ER1a	ExonRegion	0	4.09	11.08	12.36	16.80	12.40	6.96	7.06	8.94	1.92	14.22	8.14	4.33	3.01	6.90	0.00	7.11	19.26	10.53	9.35	3.99	10.61	7.15	5.72	6.74	5.12	8.79	3.73	9.58	10.05
6	E1_Da	NovelBoundary	0	0.00	4.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	3.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E2a	KnownJunction	0	25.19	42.17	7.75	21.57	20.04	25.40	11.44	27.12	11.82	23.69	18.70	15.84	5.99	23.18	0.00	25.55	54.11	9.25	24.28	7.53	28.92	26.64	15.51	13.16	12.81	20.13	2.29	12.36	25.39
8	E2_Aa	NovelBoundary	0	0.00	0.00	2.64	0.00	0.00	2.92	0.00	0.00	0.00	13.26	0.00	1.33	1.97	0.00	0.00	3.82	4.10	0.00	15.74	0.00	0.00	2.04	1.97	2.87	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	18.46	33.53	19.27	17.56	12.87	11.25	14.73	20.06	12.35	36.54	32.95	16.26	10.63	33.98	9.27	18.10	45.90	26.45	16.70	18.74	15.11	10.90	15.57	20.39	19.21	19.36	10.16	13.67	17.35
10	E2_Da	NovelBoundary	0	0.00	4.75	0.00	0.00	0.00	1.57	5.21	2.54	8.47	2.04	7.40	0.00	0.00	2.15	0.00	0.00	6.75	0.00	0.00	0.00	0.00	0.00	0.00	2.69	1.59	0.00	0.00	2.25	1.32
11	E2a_E3a	KnownJunction	0	27.61	67.96	22.10	46.16	38.91	8.44	2.69	27.42	6.21	39.03	32.20	22.47	12.23	34.39	19.53	17.52	58.70	10.02	8.09	42.76	8.78	2.38	18.47	18.96	24.28	15.02	12.47	16.40	13.44
12	I2_AR1	ActiveIntronRegion	0	1.40	3.43	1.38	3.11	1.41	1.89	2.19	0.00	1.93	2.51	2.32	1.65	0.38	3.53	0.00	1.44	2.94	1.97	4.39	1.59	1.91	0.91	0.00	2.49	0.87	0.91	0.53	0.94	0.73
13	E3_Aa	NovelBoundary	0	0.00	0.00	2.02	0.00	0.00	1.84	2.17	0.00	1.55	2.00	0.00	2.65	0.00	1.82	0.00	0.00	2.21	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	3.50	0.00
14	ER3a	ExonRegion	0	16.52	35.00	35.91	19.58	21.30	14.21	12.49	20.77	9.47	34.90	39.90	20.50	10.43	40.01	5.60	25.91	46.39	19.36	19.56	24.94	15.70	14.55	15.98	23.59	17.04	18.34	18.57	14.12	11.58
15	E3_Da	NovelBoundary	0	2.83	0.00	1.45	0.00	0.00	6.87	2.86	0.00	1.46	1.68	1.33	6.63	0.00	6.51	0.00	3.60	5.13	4.62	0.00	0.00	0.00	4.23	0.00	0.00	1.93	0.00	0.00	0.00	0.00
16	E3a_E4a	KnownJunction	0	13.63	16.38	34.41	0.00	17.39	11.93	8.24	16.47	13.76	41.78	46.15	28.79	9.68	41.70	0.00	20.73	44.25	13.87	8.09	18.52	8.54	26.89	13.64	19.14	16.90	19.96	7.95	1.75	17.23
17	I3	Intron	0	3.25	1.83	1.90	0.00	0.93	0.26	1.15	0.00	1.17	1.37	2.03	1.75	0.00	4.97	0.00	1.41	4.53	1.46	5.45	1.57	1.35	0.34	0.34	3.67	0.81	0.89	0.00	1.55	1.27
18	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.29	0.00	1.40	0.36	0.00	0.00	0.00	1.85	0.00	1.99	1.47	2.53	2.91	0.00	0.76	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.91
19	I3_SR1	SilentIntronRegion	0	3.66	2.06	2.14	0.00	1.04	0.29	1.26	0.00	1.15	1.50	2.29	1.97	0.00	5.37	0.00	1.36	4.92	1.35	5.79	1.76	1.43	0.17	0.39	4.13	0.92	1.01	0.00	1.74	1.32
20	E4_Aa	NovelBoundary	0	0.00	9.70	0.00	0.00	0.00	0.00	2.40	0.00	2.80	0.00	0.00	3.28	0.00	4.12	0.00	3.75	4.07	4.62	0.00	4.13	2.01	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00
21	ER4a	ExonRegion	0	18.29	45.99	33.28	15.23	30.30	23.30	9.95	23.86	10.10	43.07	56.21	34.18	20.69	44.97	11.26	21.99	53.12	22.63	25.27	25.30	20.10	16.24	24.39	24.87	26.59	17.80	15.45	15.33	31.40
22	E4_Da	NovelBoundary	0	0.00	0.00	2.49	0.00	0.00	1.76	0.00	0.00	3.11	0.00	2.82	1.75	0.00	8.60	0.00	2.91	20.82	9.25	0.00	3.89	2.05	0.00	0.00	3.05	0.00	0.00	0.00	4.36	0.00
23	E4a_E5a	KnownJunction	0	13.45	20.75	37.57	0.00	12.67	49.69	14.70	25.78	11.85	45.30	63.33	27.38	22.20	44.89	9.57	23.18	48.73	13.87	32.37	31.01	27.68	24.79	27.28	37.03	23.07	18.41	16.10	17.93	17.63
24	I4	Intron	0	2.07	5.08	0.65	1.62	2.21	3.93	2.07	0.57	3.65	3.95	3.36	4.05	0.39	5.09	2.70	4.47	15.15	3.80	6.58	1.85	3.17	0.22	0.37	2.57	1.38	0.81	0.60	1.07	1.26
25	I4_SR1	SilentIntronRegion	0	2.12	4.86	0.62	1.58	2.15	4.05	2.04	0.61	3.53	3.81	3.45	3.90	0.41	5.15	2.79	4.25	14.93	3.59	6.46	1.97	3.20	0.24	0.36	2.55	1.38	0.83	0.64	0.93	1.26
26	I4_AR2	ActiveIntronRegion	0	1.40	8.42	1.09	2.34	3.19	2.25	2.64	0.00	5.50	6.14	1.95	6.25	0.00	4.29	1.51	7.88	18.54	6.93	8.36	0.00	2.80	0.00	0.59	2.81	1.40	0.51	0.00	3.20	1.31
27	E5_Aa	NovelBoundary	0	8.14	4.85	1.27	0.00	14.74	10.78	2.92	0.00	17.33	9.27	1.61	2.77	0.00	9.31	0.00	0.00	15.08	0.00	0.00	3.47	4.01	1.80	0.00	11.48	3.18	0.00	0.00	2.02	9.67
28	ER5a	ExonRegion	0	20.67	79.87	29.97	22.90	37.08	33.53	25.74	11.36	35.04	52.48	81.83	48.41	26.79	51.11	19.33	30.37	79.69	31.40	49.01	20.58	35.88	12.48	19.30	55.10	36.66	24.12	43.48	20.17	41.49
29	IG44	Intergenic	0	1.54	6.93	7.38	3.60	5.61	3.94	3.55	2.77	8.75	9.37	11.05	10.51	2.83	7.66	5.42	7.47	21.58	4.80	4.35	2.37	3.22	1.36	1.23	10.26	6.66	8.29	6.37	8.83	5.54
30	IG44_SR1	SilentIntergenicRegion	0	0.49	8.01	5.97	10.61	11.94	7.41	6.05	0.00	4.68	7.97	22.45	12.71	2.20	6.89	3.18	10.60	24.27	4.73	5.59	1.90	4.63	0.41	2.81	9.88	6.04	5.97	8.23	4.27	3.26
31	IG44_AR1	ActiveIntergenicRegion	0	0.00	6.57	7.29	14.63	4.98	10.54	12.09	0.00	1.31	10.35	32.73	14.64	1.52	2.72	4.67	5.06	19.37	5.46	13.58	0.00	5.71	0.00	1.81	13.27	11.43	3.14	18.32	1.63	4.25
32	IG44_SR2	SilentIntergenicRegion	0	1.93	6.00	9.37	2.20	4.16	2.76	3.49	4.07	7.29	10.99	8.89	10.70	2.49	8.10	6.51	5.59	22.03	4.29	2.01	2.70	3.24	1.87	1.19	8.20	6.04	9.78	5.10	9.72	5.24
33	IG44_AR2	ActiveIntergenicRegion	0	1.78	6.91	6.73	2.58	5.22	3.99	2.96	2.91	12.62	8.01	9.14	10.05	3.57	7.85	5.23	8.28	22.26	5.56	6.16	2.32	2.75	1.41	0.81	12.83	7.28	8.75	7.28	10.62	7.32
34	IG44_SR3	SilentIntergenicRegion	0	0.00	10.92	1.64	0.00	0.40	1.52	0.19	0.62	2.78	11.84	5.98	5.63	1.72	5.61	5.52	6.12	5.02	2.99	3.61	1.90	2.27	0.00	0.00	6.86	8.13	0.93	2.40	2.71	1.05