Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CCDC9	Gene	0	42.97	35.77	72.47	19.91	38.52	26.24	15.45	13.66	68.18	52.87	24.82	45.23	90.74	53.27	16.25	30.57	52.70	75.66	22.37	17.05	30.24	39.11	48.07	82.23	29.46	44.44	19.35	44.13	52.37
2	221922	Transcript	0	45.81	40.34	79.58	32.73	41.59	32.41	19.05	14.61	69.69	64.36	30.00	52.71	102.88	61.57	18.15	38.64	62.27	87.91	26.58	18.74	35.01	44.55	56.65	91.24	34.91	57.15	23.48	53.73	67.96
3	IG21_AR1	ActiveIntergenicRegion	0	10.01	0.00	1.20	0.00	0.88	1.97	0.36	0.00	1.31	0.00	0.43	0.88	0.00	0.00	1.66	6.18	3.75	2.48	0.57	1.35	0.26	0.32	0.00	0.39	0.00	0.85	0.00	0.00	2.28
4	IG21_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	0	14.85	19.49	28.04	24.57	16.96	17.52	6.31	5.02	25.72	19.64	13.20	20.86	33.43	18.35	5.52	32.88	26.57	50.81	12.15	2.19	14.54	17.88	28.84	17.94	9.80	40.52	12.89	39.07	41.84
6	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.03	0.00	0.00	1.78
7	E1a_E2a	KnownJunction	1	27.02	32.58	109.63	58.02	23.87	39.52	12.99	6.32	32.95	35.23	24.23	55.15	89.61	43.43	7.77	46.59	81.98	32.11	16.18	8.02	25.03	46.14	39.05	41.33	25.19	90.59	25.00	67.98	135.62
8	I1_AR1	ActiveIntronRegion	0	2.94	3.11	8.77	0.00	2.17	2.01	2.33	1.22	6.33	2.54	0.27	1.38	10.23	2.39	0.00	0.99	3.16	8.42	0.00	0.34	6.76	4.47	7.94	4.13	1.27	6.04	2.39	0.98	12.95
9	I1_SR2	SilentIntronRegion	0	2.22	2.99	2.64	0.54	1.48	0.73	0.61	0.28	4.65	2.08	1.42	1.87	6.58	1.35	0.00	0.56	2.91	5.50	1.93	0.00	3.10	1.41	2.69	2.13	1.08	2.26	0.69	1.05	4.88
10	E2_Aa	NovelBoundary	0	0.00	0.00	0.97	0.00	0.00	1.96	0.00	0.00	1.43	0.00	0.00	1.33	0.00	1.13	0.00	0.00	4.61	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	13.82	15.40	46.88	15.12	14.34	18.58	9.59	8.93	28.57	20.41	11.37	34.77	60.33	23.74	3.78	16.31	39.22	25.85	8.50	4.71	20.66	17.71	21.77	18.92	15.28	41.14	7.90	26.87	66.87
12	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3a	KnownJunction	0	11.38	12.89	14.13	9.49	7.37	14.69	5.15	0.00	22.84	26.12	12.27	20.06	54.39	28.38	0.00	3.82	17.67	14.51	0.00	7.44	11.39	14.97	20.14	41.33	14.17	10.00	1.99	10.20	32.78
14	I2	Intron	0	0.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.47	0.00	0.00	0.71	0.47	0.00	0.00	0.00	0.00
15	I2_SR1	SilentIntronRegion	0	0.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.48	0.00	0.00	0.72	0.48	0.00	0.00	0.00	0.00
16	E3_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	3.76	0.00	0.00	0.00	6.03	0.00	0.00	0.00	0.00	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	48.26	42.67	26.09	6.13	12.19	36.95	23.15	19.11	83.95	56.71	22.59	45.84	116.33	66.77	18.40	49.80	42.79	99.63	22.50	21.23	39.31	57.22	44.60	95.06	45.83	58.17	17.09	40.01	89.90
18	E3_Da	NovelBoundary	0	7.79	8.53	1.54	0.00	0.00	1.61	0.00	0.00	1.55	5.39	0.00	1.63	0.00	2.06	8.17	3.82	5.92	4.62	0.00	0.00	0.00	1.99	0.00	0.00	1.93	0.00	2.53	5.80	1.65
19	E3a_E4a	KnownJunction	0	42.65	41.11	41.11	31.71	7.07	43.66	34.50	14.68	69.22	125.71	54.41	81.17	176.61	64.99	25.31	98.84	83.96	143.97	40.46	14.39	29.36	36.75	73.04	60.41	50.54	103.72	24.85	96.51	167.58
20	E4_Aa	NovelBoundary	0	2.42	0.00	2.27	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	0.00	1.24	1.02	0.00	0.00	3.26	0.00	0.00	0.00	1.72	0.00	0.00	0.00	0.00	8.07	0.00	0.00	0.00
21	ER4a	ExonRegion	1	41.69	17.81	65.41	5.95	42.93	27.29	14.74	8.19	52.73	57.11	38.27	70.59	105.33	54.53	12.08	35.06	72.66	74.44	16.77	15.57	24.08	37.56	48.45	61.52	32.01	78.89	44.96	87.32	102.89
22	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	1	45.60	13.19	108.06	10.78	87.24	20.99	2.92	2.54	46.78	51.01	9.87	41.17	64.17	37.33	42.26	20.73	36.98	47.65	40.46	25.80	17.69	40.16	26.40	82.13	30.99	30.30	21.17	32.26	41.96
24	ER5a	ExonRegion	0	49.73	32.85	70.90	17.96	42.96	23.50	9.65	7.87	38.23	50.04	14.19	35.45	66.37	47.76	20.49	32.75	34.88	84.47	21.71	17.19	20.11	36.71	36.08	74.10	29.99	31.45	10.81	29.57	36.36
25	E5_Da	NovelBoundary	0	6.02	9.21	0.00	0.00	0.00	0.00	2.40	0.00	3.78	1.72	0.00	0.00	0.00	0.93	0.00	0.00	3.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5a_E6a	KnownJunction	0	68.01	42.27	85.18	0.00	26.08	25.21	8.07	17.62	52.04	62.55	17.75	53.13	88.46	63.08	25.71	40.09	55.87	126.76	64.74	6.95	28.32	38.65	50.38	117.30	26.75	51.97	29.02	42.06	61.11
27	E6_Aa	NovelBoundary	0	3.01	0.00	4.14	0.00	0.00	1.57	0.00	0.00	8.71	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	1.89	0.00	2.51	0.00	0.00	0.00	0.00	4.18	1.32
28	ER6a	ExonRegion	0	67.75	35.16	78.76	22.55	38.07	24.35	12.05	15.23	58.77	56.27	19.03	47.19	96.17	65.23	20.27	44.26	49.59	108.58	36.58	15.43	20.41	40.67	53.82	88.94	33.56	41.01	22.89	32.54	40.04
29	E6a_E7a	KnownJunction	0	67.95	30.83	82.37	55.00	41.26	20.68	15.05	22.25	71.87	40.70	22.14	36.90	93.30	55.97	16.94	55.00	48.28	97.61	24.28	32.42	31.97	34.23	69.49	76.98	28.41	57.42	19.13	26.51	31.53
30	E7_Aa	NovelBoundary	0	2.83	0.00	0.00	0.00	0.00	1.65	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00
31	ER7a	ExonRegion	0	38.19	20.22	55.84	15.09	24.82	15.46	10.79	10.78	40.00	31.18	16.41	30.18	64.20	46.66	13.68	23.02	38.00	72.95	13.14	21.55	24.26	25.89	41.14	50.17	14.79	30.63	7.76	37.06	30.59
32	E7_Da	NovelBoundary	0	5.66	0.00	0.00	0.00	0.00	1.84	2.75	2.44	0.00	3.52	0.00	0.00	0.00	1.13	0.00	0.00	0.92	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.16	3.37
33	E7a_E8a	KnownJunction	0	36.04	50.32	46.42	32.35	6.34	27.47	23.34	15.78	46.96	44.82	9.05	38.88	74.52	41.99	16.34	33.51	39.95	69.22	16.18	4.05	25.47	29.02	59.59	63.82	12.65	26.01	6.96	51.00	16.90
34	E7a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	I7_SR1	SilentIntronRegion	0	1.56	2.60	0.61	0.00	2.66	2.74	2.20	0.33	4.59	1.57	0.43	0.22	0.71	2.63	1.67	1.68	0.81	2.80	1.16	0.00	1.29	0.33	0.00	2.73	0.77	3.99	0.00	2.66	1.58
36	I7_AR1	ActiveIntronRegion	0	2.54	4.74	1.32	0.00	0.00	0.54	0.00	2.91	1.33	1.71	0.94	0.00	1.03	1.25	1.82	0.98	2.95	3.05	0.00	0.00	1.69	0.71	0.00	0.00	0.57	0.00	2.90	1.93	2.11
37	E8_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	2.23	0.00	7.13	1.68	0.00	0.00	1.62	1.73	0.00	2.98	2.81	4.62	8.09	0.00	3.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.97
38	ER8a	ExonRegion	0	46.34	37.43	97.17	19.41	45.16	26.95	13.35	9.36	50.81	46.61	22.78	40.12	94.41	56.18	26.90	29.13	56.02	85.53	15.57	21.79	35.74	40.00	50.72	67.95	19.11	50.57	16.43	40.60	47.47
39	E8_Da	NovelBoundary	0	11.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.52	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	5.66	0.00
40	E8a_E9a	KnownJunction	0	43.12	37.23	108.23	83.04	68.23	44.85	31.12	10.95	83.17	83.49	46.60	59.10	112.51	85.59	9.97	38.86	81.12	97.09	16.18	19.19	47.37	47.55	54.67	110.42	49.14	94.71	72.66	111.03	60.22
41	I8	Intron	0	2.05	1.71	0.80	0.00	0.90	1.47	0.45	0.41	2.15	1.70	0.57	0.89	0.55	0.93	0.61	0.61	2.86	2.82	1.77	0.17	2.37	0.07	0.20	2.54	0.68	0.75	0.00	1.26	0.67
42	I8_SR1	SilentIntronRegion	0	2.06	1.72	0.80	0.00	0.90	1.47	0.45	0.41	2.15	1.71	0.57	0.89	0.55	0.94	0.61	0.61	2.87	2.82	1.77	0.18	2.37	0.07	0.20	2.54	0.69	0.75	0.00	1.26	0.67
43	E9_Aa	NovelBoundary	0	5.66	0.00	2.64	0.00	7.22	0.00	0.00	0.00	1.49	1.80	2.91	1.51	0.00	0.97	8.37	0.00	4.84	4.62	0.00	0.00	0.00	0.00	0.00	5.74	0.00	1.93	0.00	2.20	0.00
44	ER9a	ExonRegion	0	50.17	47.46	119.56	46.83	55.75	40.10	38.47	14.34	97.46	97.04	48.79	67.74	131.09	102.88	17.04	44.10	96.63	126.99	33.61	30.20	56.05	58.68	74.87	132.04	44.83	85.47	35.27	83.17	91.75
45	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.30	0.00	2.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E9a_E10a	KnownJunction	0	43.94	81.73	100.98	49.82	63.96	50.76	44.00	17.97	120.29	98.71	48.56	67.53	128.84	95.72	43.25	57.68	80.67	164.90	40.24	45.07	57.36	62.18	99.19	161.08	50.24	87.29	9.49	67.35	114.66
47	E10_Aa	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	1.73	0.00	0.00	3.47	1.72	0.00	0.00	2.42	0.00	0.00	0.00	2.48	4.62	0.00	4.13	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
48	ER10a	ExonRegion	0	53.46	78.33	114.15	38.23	57.51	49.91	19.37	28.20	95.04	95.94	37.37	71.02	131.38	86.40	21.66	42.15	88.15	104.73	40.13	26.43	62.90	64.74	74.79	136.99	48.41	52.66	32.01	54.05	66.67
49	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.44	0.00	0.00	0.00	0.00	0.00
50	E10a_E11a	KnownJunction	0	59.52	57.88	108.40	87.36	53.20	44.43	20.60	8.96	115.99	78.45	61.28	77.08	128.43	77.33	23.52	37.71	101.58	126.50	40.46	25.64	56.52	61.74	113.27	142.84	67.32	69.39	39.76	70.63	60.22
51	E11_Aa	NovelBoundary	0	2.48	0.00	0.00	0.00	7.37	0.00	0.00	0.00	0.00	2.04	3.07	0.00	1.34	1.06	0.00	0.00	1.33	5.39	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
52	ER11a	ExonRegion	0	68.09	88.60	144.58	50.91	64.71	58.75	38.62	31.49	144.27	118.40	66.67	92.00	205.99	105.88	13.58	41.71	124.15	127.63	45.69	36.25	70.70	77.96	101.18	172.17	67.15	80.79	41.85	81.12	110.54
53	E11a_E12a	KnownJunction	0	76.80	62.34	111.57	57.37	116.57	53.75	29.24	46.38	139.41	136.33	49.60	84.52	165.62	103.52	17.94	42.00	88.89	84.25	24.28	16.54	61.69	103.80	76.93	196.13	59.67	66.56	22.41	68.48	76.33
54	E12_Aa	NovelBoundary	0	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.71	0.00	1.20	0.00	1.02	0.00	0.00	2.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER12a	ExonRegion	0	39.38	30.00	66.95	15.12	39.93	20.05	15.17	13.99	85.80	47.78	23.60	41.94	84.62	44.40	15.08	22.82	46.50	55.73	21.44	12.90	24.33	34.41	44.56	88.91	27.12	35.26	17.73	40.30	39.18
56	IG22_AR1	ActiveIntergenicRegion	0	5.13	11.93	3.59	24.05	6.55	13.49	23.00	3.44	22.96	11.76	6.66	19.50	18.00	1.79	15.40	11.79	6.88	11.63	13.46	16.24	12.42	16.89	26.36	12.20	6.86	18.30	6.05	37.71	15.89
57	IG22_SR2	SilentIntergenicRegion	0	8.21	17.54	4.45	0.00	0.00	4.89	0.00	4.11	12.98	8.06	0.62	3.25	10.75	2.18	1.55	2.92	7.52	18.60	6.20	1.43	15.84	0.06	7.79	34.15	10.47	25.85	0.11	8.73	9.02
58	IG22_AR2	ActiveIntergenicRegion	0	2.44	5.72	1.83	0.00	0.00	4.34	0.65	1.40	4.77	6.37	0.00	2.62	8.22	1.45	2.92	1.72	4.17	8.03	8.45	1.52	5.44	0.00	2.77	9.20	6.22	11.95	0.59	4.04	9.12