Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	APOC1	Gene	0	8039.49	2211.22	1008.17	1662.38	7675.77	4852.86	2273.96	2279.39	4048.81	1689.47	1128.86	620.19	1137.30	3554.94	6580.39	2149.55	408.90	1375.79	1968.94	5088.23	1052.69	7423.11	1075.24	3370.53	2069.87	2233.42	1537.91	311.81	1027.70
2	252491	Transcript	0	9408.99	2908.37	1065.56	2371.93	11032.75	6644.45	3701.80	2509.18	4884.34	2902.79	1809.16	847.08	1402.17	4189.48	11304.18	3790.85	497.05	2589.27	3829.61	6050.87	1425.85	8050.45	1672.38	3778.81	2692.88	3120.30	2120.31	409.64	1306.92
3	IG47_AR1	ActiveIntergenicRegion	0	65.05	0.00	0.00	11.61	27.60	7.75	4.90	12.83	17.12	4.68	8.65	4.01	5.26	7.33	51.03	7.47	0.00	7.80	18.10	19.67	2.29	21.63	5.86	12.05	13.16	10.35	10.38	2.61	5.35
4	IG47_SR2	SilentIntergenicRegion	0	7.45	0.00	0.00	0.00	1.00	5.79	0.00	0.42	1.92	0.00	0.02	0.00	0.08	1.21	4.22	2.10	1.45	4.79	0.00	0.09	0.02	0.19	0.56	1.59	3.63	6.58	0.00	0.03	0.06
5	IG47_AR2	ActiveIntergenicRegion	0	24.25	4.56	3.16	20.31	17.90	14.06	42.83	8.69	92.49	5.45	2.25	14.58	28.13	6.76	41.80	12.98	3.36	21.83	9.05	7.81	5.40	28.08	4.79	13.33	9.71	17.46	2.59	6.17	17.73
6	ER1a	ExonRegion	0	4037.88	1029.40	574.77	1292.56	5882.78	2814.25	1190.82	1009.44	1456.56	998.31	625.86	293.95	421.60	1366.97	3645.28	1555.28	165.04	1019.42	1460.74	2049.62	653.96	3224.38	603.44	1196.38	986.81	1020.73	855.09	131.71	401.25
7	E1_Da	NovelBoundary	0	18.76	4.07	1.05	0.00	12.67	10.21	2.40	4.78	5.24	1.52	1.36	0.00	0.00	1.84	8.17	0.00	3.94	4.62	0.00	0.00	1.68	6.17	0.00	2.45	0.00	13.35	0.00	0.00	4.75
8	E1a_E2a	KnownJunction	0	24400.57	6303.33	2854.43	8407.68	42242.40	17310.45	7416.30	5486.39	8804.03	6380.23	4165.89	1528.01	2255.44	7559.79	26972.92	9748.39	805.22	7566.47	10764.10	12690.19	3791.55	19325.19	3681.41	7765.31	5951.50	5988.76	5967.28	773.05	2056.15
9	E1a_E3a	NovelJunction	0	18.76	0.00	0.00	0.00	0.00	1.84	24.66	0.00	1.25	0.00	3.80	1.87	0.00	1.88	0.00	0.00	0.00	0.00	0.00	7.44	7.10	2.09	0.00	5.14	1.59	0.00	0.00	0.00	3.57
10	I1	Intron	0	56.24	9.52	4.94	26.50	50.54	24.89	17.88	11.57	16.38	5.34	4.84	3.88	1.68	14.90	44.48	12.47	2.21	17.44	8.26	31.32	4.74	46.64	5.35	11.13	14.26	18.59	6.09	0.60	2.98
11	I1_AR1	ActiveIntronRegion	0	57.02	9.64	5.00	26.88	51.21	25.24	18.11	11.72	16.62	5.40	4.90	3.94	1.70	15.07	45.13	12.64	2.24	17.70	8.39	31.74	4.81	47.26	5.40	11.26	14.44	18.85	6.17	0.60	3.02
12	E2_Aa	NovelBoundary	0	147.17	23.85	36.55	8.84	142.80	103.52	51.89	15.13	49.67	52.17	16.45	1.51	18.95	85.90	51.03	26.47	12.16	27.74	32.37	71.45	28.28	142.30	10.88	14.83	13.75	22.74	11.18	0.00	14.53
13	ER2a	ExonRegion	0	11962.68	3103.40	2184.20	3484.11	17267.96	8162.49	3709.06	2962.35	5586.69	3026.48	1853.40	1153.59	1760.25	5073.94	10409.74	4281.12	758.16	2192.75	2996.62	6255.44	1810.45	10273.72	1929.20	3903.92	2713.04	3231.67	2498.12	466.04	1622.12
14	E2_Da	NovelBoundary	0	8.20	0.00	2.12	0.00	7.37	4.91	2.92	5.08	4.35	2.04	1.49	1.17	0.00	7.33	19.93	3.60	1.71	0.00	8.09	0.00	0.00	0.00	0.00	2.51	0.00	4.38	0.00	0.00	1.52
15	E2a_E3a	KnownJunction	1	1885.71	1194.24	82.24	425.78	958.65	1181.80	1419.56	703.89	1634.99	537.31	349.15	406.62	877.57	1669.43	3603.50	421.36	229.37	704.05	1326.71	2373.47	284.74	1791.40	584.64	1198.40	569.19	2319.77	662.52	346.11	1011.14
16	E2a_E4a	NovelJunction	0	58.93	4.65	0.00	8.20	0.00	12.55	7.50	28.07	13.70	15.62	1.58	1.60	4.52	13.60	137.73	3.82	0.00	4.62	40.46	76.74	4.73	22.36	0.00	14.12	10.61	1.80	7.16	0.00	3.10
17	I2	Intron	0	18.49	3.98	1.60	0.76	11.96	15.08	3.00	5.10	10.51	3.69	0.38	3.15	1.45	10.65	14.19	1.25	3.18	11.76	3.06	7.89	2.43	6.91	1.35	9.85	3.96	3.85	0.39	0.52	0.78
18	I2_AR1	ActiveIntronRegion	0	21.60	5.13	2.05	1.06	12.63	19.93	3.80	6.87	11.85	4.46	0.49	3.64	2.00	13.61	16.40	1.69	4.23	14.69	4.12	10.20	2.92	9.39	1.81	12.35	4.76	3.95	0.38	0.66	1.08
19	I2_SR1	SilentIntronRegion	0	11.06	1.05	0.46	0.00	10.88	2.60	0.98	0.50	7.48	1.78	0.10	1.98	0.03	3.13	9.01	0.10	0.48	4.41	0.33	1.98	1.23	0.48	0.16	3.56	1.99	3.82	0.44	0.17	0.00
20	E3_Aa	NovelBoundary	0	22.18	4.36	4.24	9.27	0.00	12.35	2.52	8.61	9.01	5.47	2.72	0.00	2.58	14.45	35.28	13.16	2.57	14.64	0.00	6.70	5.86	17.31	5.96	20.64	9.13	18.75	0.00	6.16	0.00
21	ER3a	ExonRegion	0	12615.59	3431.26	193.62	414.29	517.31	8095.59	2994.65	3702.29	6362.52	2149.67	1105.60	659.81	1461.10	5092.37	8283.26	2920.61	427.82	1859.61	2718.06	7684.73	1693.30	11155.76	1052.98	5248.48	3135.09	2536.60	726.55	287.92	1157.37
22	E3_Da	NovelBoundary	0	35.75	8.14	2.29	0.00	0.00	59.89	34.10	4.43	55.91	21.13	4.52	11.51	10.89	38.38	84.51	12.93	6.64	23.12	24.28	11.58	16.45	40.45	7.54	23.69	15.84	16.39	29.87	3.91	2.77
23	E3a_E4a	KnownJunction	0	6583.42	3948.98	282.49	614.29	702.08	7237.55	7666.04	2312.52	7727.05	6207.50	3537.85	1403.83	2142.20	5994.29	21469.31	6756.37	756.81	3997.65	6399.57	7522.15	1362.71	5623.27	2952.37	4586.83	4098.23	4704.42	2124.37	529.20	1986.55
24	I3	Intron	0	5.95	2.48	0.27	0.57	1.55	3.16	2.56	2.92	4.81	2.40	0.47	0.98	0.98	4.24	13.34	2.05	0.71	2.98	1.01	1.63	1.13	1.57	0.43	6.14	2.83	2.12	0.44	0.65	1.17
25	I3_AR1	ActiveIntronRegion	0	8.57	3.09	0.00	0.00	0.89	3.17	6.85	1.39	3.89	0.86	0.45	1.46	1.67	3.31	22.28	1.61	0.00	5.66	0.00	2.64	0.90	2.90	1.37	6.63	2.29	2.97	2.08	0.00	1.36
26	I3_AR2	ActiveIntronRegion	0	7.74	1.45	0.38	0.00	0.00	3.10	3.18	4.15	3.66	3.26	1.07	0.97	1.32	4.90	8.08	4.48	0.67	1.81	2.16	1.87	0.97	2.03	0.00	5.34	1.94	1.42	0.00	0.00	1.51
27	E4_Aa	NovelBoundary	0	14.63	0.00	0.00	0.00	0.00	3.64	0.00	6.82	10.32	3.83	3.01	1.45	1.50	5.18	0.00	10.25	0.00	0.00	0.00	10.17	1.72	2.48	0.00	0.00	4.89	1.93	0.00	0.00	0.00
28	ER4a	ExonRegion	0	4377.08	1348.02	1287.19	1964.83	9658.07	1709.03	1516.16	1387.37	2618.51	1020.02	1026.38	483.72	897.02	2569.54	4745.24	852.80	336.90	784.95	1141.46	3780.53	384.25	4959.40	902.62	2552.38	1396.29	2040.15	2008.23	333.42	913.86
29	IG48_AR1	ActiveIntergenicRegion	0	11.33	7.17	2.18	1.58	7.55	8.94	4.02	2.03	2.09	1.24	0.28	0.03	1.45	3.36	5.55	3.29	0.23	0.00	0.00	3.75	4.72	9.28	2.07	0.00	2.46	1.35	2.02	0.36	1.22
30	IG48_AR2	ActiveIntergenicRegion	0	14.06	0.96	0.00	2.14	5.83	5.33	6.01	2.75	3.85	2.14	1.06	0.54	0.00	6.35	4.13	1.48	0.00	0.61	4.76	2.50	2.55	2.69	1.08	3.85	3.83	0.94	0.00	0.97	1.99
31	IG48_AR3	ActiveIntergenicRegion	0	8.80	5.46	0.86	5.54	7.42	2.85	2.05	0.00	1.16	0.74	0.92	1.27	0.67	5.55	6.39	0.00	0.00	0.99	4.87	1.42	1.44	5.52	2.79	2.19	1.88	1.62	2.83	0.00	1.21
32	IG48_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00