Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF726	Gene	0	7.60	3.03	3.26	15.72	2.27	4.45	9.69	3.22	2.74	7.29	0.24	4.73	0.52	3.69	3.83	6.22	7.90	9.01	13.66	6.97	8.44	3.16	2.00	3.81	5.01	4.84	5.15	4.69	4.19
2	322487	Transcript	0	12.65	6.64	9.32	38.25	6.18	9.34	21.79	5.66	6.38	14.43	1.62	12.47	1.49	7.26	8.50	13.50	17.49	15.39	14.73	13.30	14.50	5.70	5.11	8.01	10.30	13.09	12.88	12.81	9.80
3	ER1a	ExonRegion	0	31.06	9.07	20.98	189.63	33.63	13.57	44.64	7.76	9.13	32.98	0.00	23.22	2.02	9.48	13.94	27.23	24.01	32.56	38.52	9.01	17.70	12.23	11.16	9.24	17.31	34.25	44.02	34.93	17.30
4	E1a_E2a	KnownJunction	0	4.54	3.68	30.89	110.87	20.19	9.32	25.35	0.00	11.42	12.86	0.00	17.05	1.85	9.31	7.57	15.38	28.27	5.39	8.09	18.28	15.80	3.84	3.94	5.08	11.18	36.09	16.40	29.43	21.03
5	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	6.48	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00	3.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E2_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	44.79	17.41	8.88	24.47	8.08	18.87	36.36	19.19	11.54	14.62	0.13	14.38	3.43	17.07	8.47	14.89	25.90	24.11	22.95	26.93	30.77	25.48	3.45	17.48	18.71	13.02	4.11	6.10	24.12
8	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E2a_E3a	KnownJunction	0	19.23	9.70	12.88	41.20	0.00	10.90	46.29	4.73	6.79	41.90	1.42	41.51	4.97	8.75	0.00	32.21	58.84	14.26	16.18	26.30	34.49	4.81	4.24	22.55	25.00	23.35	16.95	8.31	22.32
10	ER3a	ExonRegion	0	44.41	19.98	21.67	60.25	7.78	24.00	85.08	19.04	18.98	53.65	2.96	45.47	5.29	16.42	26.84	34.51	51.76	63.42	67.23	37.18	37.15	12.90	22.17	29.69	32.31	54.45	50.94	60.07	34.97
11	E3_Da	NovelBoundary	0	13.51	9.40	30.77	29.77	19.31	9.25	35.93	11.79	2.65	14.66	0.00	12.11	0.00	15.38	0.00	7.65	9.18	0.00	0.00	11.00	14.72	3.99	2.51	24.58	14.32	6.01	50.24	8.67	12.55
12	E3a_E4a	KnownJunction	0	7.79	8.14	21.20	28.90	0.00	15.23	7.38	11.05	8.62	15.74	0.00	11.75	0.00	14.62	0.00	16.14	22.67	18.49	24.28	2.98	13.56	2.43	2.51	2.93	6.82	3.82	6.11	11.95	1.68
13	Ix_AR1	ActiveIntronRegion	0	10.66	6.57	5.12	76.78	14.94	6.66	22.61	1.17	6.01	11.78	1.06	6.92	0.17	3.58	3.75	3.21	3.62	13.38	15.07	14.59	7.27	3.91	1.15	10.97	5.47	3.20	14.71	7.90	2.21
14	Ix_AR2	ActiveIntronRegion	0	0.00	3.84	2.14	0.00	0.00	3.95	9.71	0.28	1.35	3.73	0.00	2.15	0.00	1.03	9.99	3.89	2.99	0.13	9.40	5.06	6.85	1.00	0.53	2.32	1.76	1.77	9.02	2.71	0.00
15	Ix_AR3	ActiveIntronRegion	0	0.00	16.24	7.34	2.72	4.84	7.54	16.64	4.16	3.37	10.07	0.00	5.94	1.63	4.77	11.68	0.00	12.68	2.50	7.89	9.72	10.31	6.08	1.60	1.91	3.59	5.61	13.19	2.00	0.00
16	Ix_AR4	ActiveIntronRegion	0	0.00	14.47	8.95	7.14	1.78	7.36	17.85	2.59	7.30	11.07	0.00	5.15	3.43	1.71	5.33	1.21	10.64	3.31	17.24	11.71	12.77	3.31	1.77	2.36	1.09	0.00	6.93	0.00	0.00
17	Ix_AR5	ActiveIntronRegion	0	1.39	9.47	6.20	13.77	0.00	8.41	8.66	0.00	6.34	5.94	0.00	3.78	2.60	1.81	0.33	3.28	6.78	8.19	8.79	7.11	15.52	3.50	2.98	3.42	0.08	0.00	7.22	0.96	0.00
18	Ix_AR6	ActiveIntronRegion	0	2.14	3.83	5.61	17.06	11.21	11.00	11.42	0.00	4.59	7.34	0.00	3.92	0.87	0.91	0.00	4.85	5.18	6.60	18.48	7.03	18.54	1.80	1.81	2.15	1.43	4.32	12.67	1.63	0.00
19	Ix_AR7	ActiveIntronRegion	0	2.14	6.57	4.32	21.94	14.94	10.15	13.80	0.00	2.42	8.11	0.00	3.33	0.00	1.54	0.00	2.53	4.62	1.26	26.81	5.62	16.90	1.80	1.81	2.15	1.43	4.71	14.65	1.63	0.00
20	Ix_AR8	ActiveIntronRegion	0	2.14	9.53	3.03	16.09	14.94	10.72	14.92	0.00	2.25	10.83	0.00	2.72	0.00	0.91	0.00	3.80	4.01	1.64	31.23	2.81	13.69	1.08	0.54	3.01	1.43	4.71	14.65	2.93	0.00
21	ER4a	ExonRegion	0	2.65	1.27	1.42	6.60	0.31	2.61	3.03	1.48	1.13	3.78	0.15	1.50	0.04	2.19	2.45	3.87	4.39	4.98	11.10	5.05	6.14	0.95	0.60	1.52	2.72	0.62	1.43	0.69	1.00
22	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	7.51	0.00	1.54	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	5.94	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	0	2.77	4.56	2.59	20.28	0.00	19.84	16.13	4.68	7.16	5.79	13.38	2.83	0.00	5.03	9.37	10.79	2.50	0.00	0.00	15.55	16.97	6.86	9.26	11.25	5.34	0.00	0.00	4.22	4.65
24	E5_Aa	NovelBoundary	0	11.97	19.39	3.86	20.06	0.00	24.75	31.53	5.08	10.96	8.11	8.04	4.70	3.50	24.64	9.97	22.95	25.01	0.00	0.00	28.94	21.82	12.40	0.00	23.81	13.18	10.86	10.14	2.25	31.03
25	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	4.83	0.00	0.68	1.65	0.00	0.03	0.00	0.02	0.00	0.00	1.73	1.05	0.00	0.00	0.88	2.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5_Da	NovelBoundary	0	15.40	18.61	4.09	52.20	6.93	30.12	37.25	18.46	34.05	65.95	26.32	19.94	6.69	19.74	34.88	45.52	41.44	36.73	39.56	49.95	55.67	8.26	29.25	39.12	32.01	6.01	24.45	15.10	18.69
27	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E6_Aa	NovelBoundary	0	38.69	3.78	10.56	77.00	7.37	87.44	68.66	4.53	32.92	85.16	31.00	34.67	1.27	52.80	9.97	58.83	73.85	14.90	16.18	25.55	74.73	18.04	32.75	44.02	32.62	25.71	19.48	38.33	78.70
29	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.23	0.00	1.07	0.20	0.00	0.00	0.00	0.91	0.00	0.00	0.00	2.28	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00
30	E6_Da	NovelBoundary	0	33.80	39.65	8.10	87.57	93.14	58.01	73.41	41.36	38.71	73.38	36.95	60.66	5.00	40.26	121.58	119.87	26.36	51.50	80.03	131.33	72.92	11.86	30.88	43.01	70.09	18.58	67.09	26.02	8.62
31	E6a_E7a	KnownJunction	0	5.07	12.51	0.00	15.10	10.32	6.52	12.70	5.23	5.24	1.92	2.97	3.52	1.75	9.15	41.86	18.51	4.93	31.47	0.00	31.09	13.28	2.33	8.77	2.57	13.90	3.69	26.34	10.51	0.00
32	Ix	Intron	0	1.89	0.00	0.84	8.13	0.00	1.04	1.27	1.62	0.21	2.18	0.00	4.97	0.00	1.02	1.16	2.50	1.32	1.25	4.02	0.94	2.51	1.36	0.68	0.00	0.90	1.98	0.23	0.21	0.51
33	Ix_SR1	SilentIntronRegion	0	1.89	0.00	0.84	8.15	0.00	1.04	1.27	1.63	0.21	2.19	0.00	4.98	0.00	1.03	1.16	2.51	1.32	1.26	4.03	0.95	2.52	1.37	0.68	0.00	0.91	1.98	0.23	0.21	0.51
34	E7_Aa	NovelBoundary	0	11.15	0.00	0.00	8.41	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.91	2.04	0.00	0.00
35	ER7a	ExonRegion	0	2.14	0.00	0.67	0.00	0.00	0.55	1.21	0.37	1.16	2.56	0.00	0.86	0.00	1.38	0.00	1.98	2.39	1.99	3.19	0.55	1.71	0.00	0.36	1.71	0.57	0.94	1.10	0.33	0.40