Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF699	Gene	0	15.20	17.37	9.08	32.49	12.42	27.23	23.95	17.98	7.64	27.30	28.16	8.78	5.00	24.61	9.81	15.69	31.07	16.38	23.43	25.13	12.25	4.91	7.63	10.83	18.03	7.92	12.54	7.65	7.05
2	308650	Transcript	0	15.11	10.50	12.47	35.69	11.71	25.73	23.68	19.14	5.03	26.48	24.30	7.05	1.93	22.84	4.75	16.79	21.38	15.93	14.84	24.39	8.12	4.13	9.42	7.19	13.78	7.75	10.32	6.97	7.21
3	ER1a	ExonRegion	0	10.18	3.01	1.64	26.51	4.26	10.77	5.17	17.87	1.01	15.01	12.99	3.89	0.81	6.37	1.87	8.70	7.95	11.66	13.95	12.94	3.27	1.39	8.02	5.11	9.44	9.23	9.88	5.40	5.96
4	E1a_E2a	KnownJunction	0	29.61	3.59	11.46	30.41	13.71	20.99	6.87	34.19	1.89	24.21	24.55	9.46	1.85	22.64	16.14	15.99	19.16	13.87	16.18	37.79	7.74	4.62	13.99	13.64	18.45	14.50	17.10	11.28	14.69
5	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	2.04	0.00	0.00	0.00	0.00	0.00	0.00	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	20.86	12.54	11.65	22.28	6.39	18.79	22.27	25.83	6.08	22.44	18.93	6.42	3.85	25.11	1.15	18.73	27.64	10.83	17.93	22.09	6.50	6.37	8.07	7.77	14.89	10.72	6.56	7.39	6.24
7	E2a_E3a	KnownJunction	0	21.18	4.85	25.49	34.51	19.60	33.34	49.32	26.87	14.31	21.53	17.34	4.52	0.00	24.24	0.00	31.06	23.70	18.49	0.00	37.38	7.06	4.18	5.02	7.96	7.84	5.36	0.00	12.49	5.28
8	E3_Aa	NovelBoundary	0	0.00	4.17	0.00	0.00	0.00	1.80	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	17.86	13.05	17.56	30.96	4.31	23.31	34.74	26.94	5.25	31.78	24.20	6.03	1.88	27.87	7.16	16.28	18.11	16.20	16.72	19.37	12.66	4.39	11.31	7.93	15.83	10.80	5.96	5.68	6.52
10	E3_Da	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	3.06	0.00	6.73	1.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.95	0.00	0.00	0.00
11	E3a_E4a	KnownJunction	1	5.66	22.88	15.70	80.24	0.00	22.91	19.51	6.62	3.05	28.48	15.37	3.22	0.00	19.50	0.00	26.55	14.47	23.12	0.00	14.89	6.34	4.86	9.95	5.44	12.92	3.43	7.60	0.00	11.69
12	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.35	0.00	0.00	0.00	1.37	0.00	0.00	3.69	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
13	ER4a	ExonRegion	1	12.76	16.50	13.12	47.85	11.89	35.93	28.20	9.17	5.59	30.24	32.75	7.41	2.17	29.92	5.63	15.42	24.29	13.75	20.17	30.75	11.54	1.75	7.28	5.30	13.51	5.71	8.13	3.12	2.01
14	E4a_E5a	KnownJunction	0	2.77	0.00	7.18	16.39	31.98	38.10	23.46	6.97	0.00	37.23	43.85	13.28	1.34	25.52	0.00	2.75	24.47	18.49	24.28	18.94	5.29	4.42	13.64	0.00	12.43	2.19	24.20	9.30	5.02
15	I4	Intron	0	0.60	0.00	0.00	0.00	0.00	0.77	1.70	0.52	0.00	2.24	1.01	0.17	0.00	0.00	0.00	0.70	0.63	0.27	3.15	0.00	1.00	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I4_SR1	SilentIntronRegion	0	0.61	0.00	0.00	0.00	0.00	0.78	1.71	0.52	0.00	2.25	1.01	0.18	0.00	0.00	0.00	0.70	0.63	0.27	3.17	0.00	1.01	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	0.00	5.11	1.61	0.00	0.00	0.00	0.00	0.00	2.50	0.00	0.00	0.00	3.25	2.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER5a	ExonRegion	0	15.07	18.10	8.45	32.08	13.23	27.49	23.62	17.84	8.08	27.36	28.73	9.19	5.46	24.41	10.76	15.67	32.66	16.93	24.37	25.35	12.72	5.14	7.48	11.59	18.74	7.79	13.45	8.10	7.48
19	IG33_SR2	SilentIntergenicRegion	0	4.29	1.09	1.87	18.28	0.00	3.05	5.04	3.58	2.18	7.38	5.42	1.17	0.00	5.14	12.45	0.00	5.01	1.06	5.03	3.59	0.00	0.40	5.63	3.70	1.59	4.80	0.00	1.18	1.57
20	IG33_AR1	ActiveIntergenicRegion	0	8.05	19.17	9.74	32.44	10.47	26.25	25.73	13.36	18.39	28.05	17.91	9.20	4.82	14.95	14.74	13.61	26.24	11.41	14.58	16.83	15.13	5.88	6.72	17.09	15.42	7.97	11.37	7.49	6.87