Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	STAP2	Gene	0	43.56	23.80	41.39	11.19	7.95	25.66	36.28	23.17	35.93	26.42	18.45	20.02	43.78	18.79	8.52	10.24	30.09	14.94	8.80	8.67	20.46	56.51	21.61	16.15	22.35	17.17	9.91	6.93	15.27
2	314714	Transcript	0	13.42	12.96	28.56	2.63	5.39	5.92	5.83	8.09	12.85	11.44	8.40	4.05	12.34	8.79	10.54	2.79	18.67	8.55	5.44	7.46	13.54	15.87	10.90	9.61	5.78	10.62	4.08	12.05	7.92
3	424810	Transcript	1	21.94	20.07	10.41	0.00	6.78	16.27	35.13	19.46	50.64	27.24	16.23	7.17	32.26	15.29	0.00	17.44	16.41	4.62	8.09	0.00	11.35	33.25	20.34	11.36	19.25	14.63	8.40	0.00	7.89
4	IG6_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	3.93	2.68	3.02	1.11	1.01	0.00	0.79	0.65	2.09	4.27	0.00	0.00	0.00	0.00	0.00	1.27	0.00	3.04	0.00	0.99	0.05	0.78	0.00	2.01	0.00	0.74
5	ER1a	ExonRegion	0	19.33	11.65	20.63	6.72	0.00	22.11	23.82	10.79	12.79	16.15	13.95	5.37	15.44	6.18	1.94	7.39	11.66	9.50	6.00	0.97	18.72	47.21	12.84	4.77	8.58	9.49	3.11	1.80	12.15
6	E1a_E2a	KnownJunction	0	32.50	26.66	9.74	10.35	0.00	23.21	44.46	17.02	20.28	26.88	8.89	11.33	24.55	10.95	8.37	11.40	4.52	13.87	24.28	4.13	27.11	88.92	9.21	2.93	20.76	14.03	7.16	2.11	28.99
7	I1_AR1	ActiveIntronRegion	0	0.99	0.00	1.05	0.00	0.00	0.00	0.44	0.00	1.39	0.98	0.93	1.71	3.09	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	1.29	0.00	0.00	0.00	0.49	0.00
8	E2_Aa	NovelBoundary	0	0.00	0.00	2.62	0.00	0.00	1.96	2.92	0.00	2.68	0.00	0.00	0.00	0.00	1.04	0.00	0.00	2.63	0.00	7.87	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	64.39	16.52	13.93	4.47	2.98	39.81	47.68	34.32	36.23	36.01	19.34	13.81	46.93	19.67	5.91	17.50	19.10	16.30	11.50	8.08	41.96	87.71	23.48	18.37	24.64	18.66	14.68	4.57	16.39
10	E2_Da	NovelBoundary	0	0.00	0.00	2.74	0.00	7.37	0.00	2.92	0.00	0.00	1.80	1.58	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	62.94	17.94	25.94	10.78	14.00	61.43	80.39	20.45	42.27	50.41	46.28	22.02	69.13	27.50	8.37	39.09	33.27	23.12	8.09	13.73	45.77	60.33	32.70	19.86	29.59	36.26	12.08	6.16	14.72
12	I2	Intron	0	0.00	0.00	0.00	0.00	14.37	0.45	0.66	0.00	0.37	0.00	0.39	0.81	0.00	0.44	0.00	0.00	1.46	0.00	1.04	0.00	2.33	0.59	0.00	0.00	0.47	0.00	0.00	0.00	0.44
13	I2_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	14.85	0.46	0.64	0.00	0.38	0.00	0.40	0.84	0.00	0.46	0.00	0.00	1.51	0.00	1.08	0.00	2.41	0.61	0.00	0.00	0.48	0.00	0.00	0.00	0.45
14	E3_Aa	NovelBoundary	0	0.00	0.00	2.19	0.00	12.97	0.00	0.00	0.00	3.99	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	1.67	0.00	0.00	1.68
15	ER3a	ExonRegion	0	63.54	29.91	36.68	4.34	10.61	34.70	47.18	26.22	27.67	34.73	34.05	19.14	46.58	29.14	5.24	11.30	31.37	16.29	14.17	10.37	24.55	45.83	27.29	16.56	35.21	19.98	6.52	4.86	19.97
16	E3_Da	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	0.00	0.00	0.00	4.66	0.00	0.00	0.00	0.00	1.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E3a_E4a	KnownJunction	0	64.65	21.04	51.52	0.00	21.07	28.32	45.89	14.03	41.96	23.93	18.79	15.12	55.00	22.58	0.00	6.43	24.42	13.87	16.18	8.02	16.77	44.92	15.56	27.34	27.20	7.17	4.27	2.11	2.05
18	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	12.08	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00
19	ER4a	ExonRegion	1	54.87	14.35	53.52	23.73	6.29	33.60	47.21	17.31	35.34	26.37	14.87	18.01	53.49	33.39	6.78	8.70	31.55	16.28	2.54	9.07	24.25	45.92	17.35	16.68	22.24	11.14	3.66	3.15	10.01
20	E4a_E5a	KnownJunction	0	60.87	17.16	49.63	30.20	13.41	38.18	21.28	10.35	36.42	14.70	11.29	22.05	37.67	38.40	0.00	17.37	38.00	23.12	0.00	10.92	25.43	40.45	15.51	8.91	19.59	21.89	4.62	8.00	19.54
21	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.86	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	1.45
22	ER5a	ExonRegion	0	51.06	26.51	41.57	30.92	9.47	34.94	37.72	22.40	29.66	32.26	23.70	22.77	50.37	27.05	3.55	13.38	36.29	16.29	9.99	5.73	19.25	60.72	24.99	14.85	30.48	29.15	9.86	6.07	13.25
23	E5a_E6a	KnownJunction	0	58.45	7.95	40.69	9.27	6.63	31.92	32.78	19.56	33.44	24.37	15.22	22.23	55.09	19.30	7.57	11.47	44.64	23.12	8.09	8.27	7.94	59.90	18.12	16.03	19.70	16.87	19.33	3.95	14.46
24	E5a_E7a	NovelJunction	0	0.00	3.49	1.49	0.00	0.00	0.00	0.00	0.00	1.52	1.80	3.23	3.13	6.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	2.46	0.00	1.93	0.00	0.00	0.00	0.00
25	I5	Intron	0	1.37	0.91	0.83	0.00	6.93	0.68	2.14	0.78	2.67	0.92	0.25	0.44	0.87	0.58	0.00	0.88	1.80	0.43	1.81	0.20	0.81	0.51	0.13	0.31	0.61	0.11	0.00	0.12	0.57
26	I5_SR1	SilentIntronRegion	0	1.64	1.23	0.80	0.00	9.33	0.79	0.96	0.70	2.69	0.97	0.34	0.47	0.86	0.43	0.00	0.47	2.28	0.40	1.25	0.00	0.54	0.34	0.17	0.21	0.55	0.00	0.00	0.00	0.51
27	I5_AR1	ActiveIntronRegion	0	0.60	0.00	0.93	0.00	0.00	0.38	5.62	1.03	2.63	0.80	0.00	0.34	0.90	1.01	0.00	2.07	0.42	0.54	3.49	0.77	1.59	1.00	0.00	0.60	0.80	0.44	0.00	0.45	0.75
28	E6_Aa	NovelBoundary	0	0.00	0.00	4.96	0.00	20.48	0.00	0.00	2.49	2.80	0.00	0.00	0.00	0.00	0.84	0.00	0.00	2.43	4.62	24.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER6a	ExonRegion	0	40.00	16.08	50.46	3.41	1.29	21.97	37.46	18.08	27.47	23.72	10.63	21.72	41.46	19.42	6.76	11.47	38.74	14.37	4.59	4.56	20.61	45.35	22.32	14.15	20.22	15.34	6.48	4.52	20.09
30	E6a_E7a	KnownJunction	0	43.77	34.81	38.89	9.49	0.00	26.36	37.82	23.79	36.82	20.41	12.21	31.93	53.24	15.35	0.00	10.33	51.28	14.38	0.00	3.64	15.60	56.30	19.21	8.43	19.70	10.00	8.80	8.63	23.34
31	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	0.00	0.00	1.32
32	ER7a	ExonRegion	0	58.85	22.38	34.34	28.21	13.66	25.73	54.57	26.59	31.17	28.09	19.33	44.95	81.76	18.56	7.60	8.21	70.38	23.59	2.78	7.99	11.39	61.96	21.54	14.47	23.83	16.66	17.98	10.94	28.17
33	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.38	0.00	2.54	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E7a_E8a	KnownJunction	0	54.92	25.98	38.17	8.63	0.00	33.92	62.59	20.95	45.10	36.83	21.48	52.62	61.91	19.74	0.00	7.50	79.28	18.49	0.00	0.00	15.20	47.99	26.30	3.05	13.56	20.86	4.08	20.80	32.42
35	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	1.54	1.53	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00
36	ER8a	ExonRegion	0	66.97	43.28	55.42	14.06	10.64	34.86	38.24	39.34	55.41	42.49	23.66	40.59	57.36	28.20	15.71	10.02	53.62	14.36	5.18	17.06	28.06	87.32	33.71	24.71	24.81	17.21	21.66	7.77	18.28
37	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E8a_E9a	KnownJunction	0	39.87	33.64	59.35	8.20	6.93	24.75	41.14	43.45	45.77	28.64	11.23	25.06	57.70	25.70	0.00	6.73	45.94	14.64	0.00	18.03	23.71	84.06	22.46	23.87	27.62	8.33	34.49	11.19	18.06
39	I8_SR1	SilentIntronRegion	0	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.60
40	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER9a	ExonRegion	0	60.28	30.36	58.86	17.28	11.25	28.83	50.97	31.27	28.29	22.93	15.72	28.49	68.57	19.50	4.24	12.62	45.38	27.58	12.21	13.20	17.70	74.10	20.77	19.43	30.49	13.24	14.96	7.53	18.63
42	E9a_E10a	KnownJunction	0	75.27	27.05	66.72	28.47	7.37	24.48	42.22	42.20	25.34	22.89	3.01	36.93	58.85	15.58	0.00	14.92	47.94	14.77	8.09	11.99	23.26	81.82	15.71	11.19	24.70	12.23	4.77	8.76	21.23
43	E9a_E11a	NovelJunction	0	0.00	0.00	3.84	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	5.51	1.11	0.00	0.00	2.07	4.62	0.00	0.00	1.56	2.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER10a	ExonRegion	0	55.76	36.00	71.04	16.87	8.00	32.85	47.48	41.29	60.57	45.27	21.98	32.55	60.84	19.96	8.51	13.26	32.76	13.70	9.62	13.42	22.19	71.48	29.98	20.39	27.33	24.70	17.97	10.27	18.49
45	E10a_E11a	KnownJunction	0	56.04	26.76	57.95	33.22	0.00	23.17	52.69	37.72	55.09	27.64	17.53	23.31	74.39	17.48	8.57	10.79	26.54	24.14	16.18	7.11	20.58	62.62	24.62	19.26	19.59	26.26	30.91	4.40	25.85
46	ER11a	ExonRegion	0	42.98	29.60	48.59	12.19	14.94	27.57	56.44	35.97	65.93	32.76	26.86	22.90	69.31	25.94	10.48	13.39	35.53	17.84	14.79	16.17	27.01	73.31	29.90	17.16	32.75	26.06	15.09	5.82	15.73
47	E11_Da	NovelBoundary	0	0.00	0.00	2.57	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	3.05	0.00	2.02	0.00	0.00	0.00
48	E11a_E12a	KnownJunction	0	7.55	17.94	36.38	0.00	0.00	7.40	2.35	6.92	8.71	11.42	4.56	1.23	9.78	5.41	0.00	0.00	14.25	0.00	0.00	8.27	19.69	13.37	11.23	8.19	3.45	6.22	2.68	1.80	8.35
49	E11a_E12b	KnownJunction	1	21.94	20.07	10.41	0.00	6.78	16.27	35.13	19.46	50.64	27.24	16.23	7.17	32.26	15.29	0.00	17.44	16.41	4.62	8.09	0.00	11.35	33.25	20.34	11.36	19.25	14.63	8.40	0.00	7.89
50	I11	Intron	0	0.00	0.00	0.00	0.00	0.00	1.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	0.00
51	I11_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.39	0.00	0.00	0.00	0.00
52	E12_Aa	NovelBoundary	1	96.38	93.36	51.42	20.28	91.22	86.52	52.64	55.04	76.10	116.28	51.28	28.46	27.64	48.61	128.76	68.93	67.46	0.00	0.00	39.20	92.61	42.10	24.03	72.32	96.87	80.25	52.83	91.93	46.22
53	ER12a	ExonRegion	1	19.29	7.99	20.74	5.26	10.79	4.44	9.31	9.27	16.99	11.45	12.24	6.87	14.90	12.18	21.07	5.59	23.09	17.10	10.88	6.65	7.39	18.36	10.58	11.02	8.11	15.03	5.47	22.29	7.49
54	E12_Ab	KnownBoundary	0	7.31	13.28	9.32	0.00	0.00	5.64	2.12	8.96	23.17	13.54	9.11	2.68	17.74	5.23	0.00	0.00	0.99	4.62	8.09	10.75	5.62	22.85	11.13	8.37	12.62	3.86	2.19	3.95	7.00
55	ER12b	ExonRegion	1	36.73	47.94	18.48	0.00	0.94	26.55	31.54	27.74	58.16	22.75	13.14	13.49	41.27	16.58	15.44	10.02	16.58	11.88	14.74	12.84	28.26	70.04	18.18	22.96	23.91	13.19	5.87	0.79	8.89
56	E12_Da	NovelBoundary	0	0.00	0.00	4.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.04	0.00	0.00	0.00	2.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55
57	E12a_E13a	KnownJunction	0	26.54	8.43	18.56	0.00	0.00	5.45	15.68	18.46	19.55	8.63	7.02	8.83	16.62	12.43	16.94	10.17	4.73	4.62	16.18	3.72	3.29	48.42	4.63	24.46	12.46	1.93	2.48	1.75	1.65
58	ER13a	ExonRegion	0	27.04	18.64	55.02	7.12	14.56	13.68	19.90	7.75	40.74	10.19	13.08	12.38	29.10	10.08	7.96	6.67	12.17	9.36	6.67	6.37	11.27	45.95	17.06	22.11	20.58	13.15	5.84	4.24	11.44