Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PRAM1	Gene	0	5.79	19.17	28.94	1.33	0.11	14.10	2.86	1.50	4.96	5.95	2.05	1.63	6.66	9.50	3.53	3.66	2.60	6.72	1.11	3.41	10.45	35.78	4.33	27.63	19.62	7.13	6.69	7.43	15.41
2	423345	Transcript	0	4.90	19.12	20.59	5.82	0.00	9.88	0.00	0.00	1.71	6.75	6.88	0.06	4.18	10.27	14.70	7.99	1.76	7.86	0.00	0.00	8.84	45.25	3.12	39.68	21.34	2.13	3.51	6.74	13.72
3	255612	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	IG9	Intergenic	0	0.35	0.40	0.68	0.63	0.12	0.89	0.76	0.54	1.35	0.44	0.20	0.23	0.19	0.57	2.02	1.37	2.72	0.95	1.17	0.48	0.56	0.59	0.30	0.76	1.54	0.68	0.00	4.10	1.06
5	IG9_AR1	ActiveIntergenicRegion	0	2.95	1.06	1.51	10.32	1.02	3.67	6.19	9.17	9.29	2.62	2.79	0.84	1.45	4.22	5.35	3.52	5.04	7.94	3.80	8.03	4.55	5.75	5.76	4.57	7.75	7.59	0.00	16.52	3.01
6	IG9_SR1	SilentIntergenicRegion	0	0.28	0.38	0.65	0.36	0.10	0.81	0.61	0.29	1.13	0.38	0.12	0.21	0.15	0.46	1.93	1.31	2.65	0.75	1.10	0.27	0.45	0.45	0.14	0.65	1.36	0.48	0.00	3.75	1.00
7	ER1a	ExonRegion	0	4.75	9.03	4.49	0.00	0.00	1.62	0.00	0.00	0.00	0.26	2.85	0.18	2.46	2.88	0.00	1.54	0.00	3.41	0.00	0.00	4.23	15.71	2.26	5.99	1.38	2.64	0.92	2.50	7.05
8	ER1b	ExonRegion	0	8.34	12.28	16.78	0.00	0.00	7.26	0.00	1.60	0.00	1.44	7.35	1.72	10.42	7.08	0.00	5.06	0.76	2.20	0.00	0.00	11.44	37.35	6.56	13.51	15.13	2.60	9.64	3.30	28.51
9	E1a_E2a	KnownJunction	0	2.65	13.67	26.78	0.00	0.00	5.52	0.00	5.08	0.00	0.00	0.00	1.48	8.79	8.42	0.00	3.21	1.40	0.00	0.00	0.00	1.97	20.03	0.00	5.44	16.18	0.00	12.67	4.18	48.56
10	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	5.17	15.33	31.38	1.30	0.18	15.37	3.05	1.28	3.36	5.26	1.17	1.73	6.01	9.05	2.97	3.54	1.80	7.45	1.50	3.77	10.14	30.22	3.72	23.32	18.48	6.17	5.32	7.85	13.19
12	E2_Da	NovelBoundary	0	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3a	KnownJunction	0	4.72	12.22	21.97	0.00	0.00	19.57	2.75	0.00	1.16	9.07	0.00	0.00	1.31	12.56	0.00	7.42	2.52	13.74	0.00	4.13	13.76	61.55	6.55	47.01	35.88	3.78	3.98	4.18	17.33
14	ER3a	ExonRegion	0	4.39	31.62	25.84	3.54	0.00	14.46	0.54	0.00	4.32	5.91	1.10	0.99	8.16	13.46	4.90	7.08	3.16	10.49	0.07	3.25	14.67	40.08	3.70	46.72	31.42	2.31	4.38	3.39	15.08
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E3b_E4a	KnownJunction	0	5.66	20.94	26.98	10.14	0.00	15.65	0.00	0.00	2.89	11.34	8.26	0.00	4.46	13.43	32.89	12.32	3.26	9.25	0.00	0.00	10.87	61.74	2.27	58.56	33.57	2.19	4.72	10.11	17.56
17	ER3b	ExonRegion	0	4.29	27.37	30.30	7.31	0.00	12.37	0.00	0.00	2.25	8.66	9.52	0.00	5.63	14.51	11.20	10.12	2.00	10.92	0.00	0.00	11.41	58.29	4.82	54.50	29.06	1.57	4.88	7.61	16.55
18	ER4a	ExonRegion	0	9.60	25.72	38.30	1.52	0.00	17.26	0.31	0.96	6.60	6.84	7.20	1.40	7.52	13.04	2.18	5.69	3.17	2.37	0.00	1.64	12.95	55.98	3.45	39.22	37.61	7.23	6.07	9.59	15.16
19	E4_Da	NovelBoundary	0	2.71	4.85	8.52	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.95	8.37	0.00	2.59	4.62	0.00	0.00	4.09	1.90	0.00	0.00	5.11	1.85	0.00	0.00	1.35
20	E4a_E5a	KnownJunction	0	5.19	32.96	43.65	0.00	0.00	11.63	2.46	2.09	5.45	1.88	1.36	1.30	15.44	13.05	0.00	0.00	5.38	10.02	0.00	0.00	20.82	64.08	0.00	32.78	38.72	14.20	9.59	4.13	20.50
21	I4	Intron	0	2.04	0.98	2.07	0.00	0.00	2.53	0.58	0.45	1.07	0.61	0.32	0.37	0.19	1.27	0.92	0.85	1.06	1.12	0.35	0.55	1.93	1.08	0.08	4.62	2.53	0.59	0.16	1.26	1.65
22	I4_SR1	SilentIntronRegion	0	3.24	2.16	1.89	0.00	0.00	4.24	0.25	0.80	0.63	1.44	0.30	0.81	0.40	1.95	0.00	1.31	1.30	1.36	0.40	0.86	3.60	1.24	0.23	5.64	3.48	1.47	0.23	2.04	3.01
23	I4_AR1	ActiveIntronRegion	0	2.01	0.00	1.97	0.00	0.00	2.08	0.48	0.66	0.61	0.17	0.29	0.44	0.00	0.54	1.66	0.60	1.25	2.01	0.00	0.00	1.82	1.08	0.00	3.87	2.06	0.19	0.00	1.37	0.56
24	I4_SR2	SilentIntronRegion	0	1.36	0.00	2.67	0.00	0.00	1.14	1.16	0.12	1.68	0.18	0.38	0.00	0.12	1.21	1.18	0.63	0.95	0.63	0.61	0.70	0.63	1.15	0.00	4.53	2.19	0.10	0.23	0.73	1.37
25	E5_Aa	NovelBoundary	0	3.01	0.00	2.94	0.00	0.00	8.86	4.58	0.00	5.76	1.84	0.00	0.00	0.00	4.76	8.37	3.60	1.35	0.00	8.09	0.00	1.76	0.00	0.00	13.40	3.83	0.00	0.00	1.84	8.81
26	ER5a	ExonRegion	0	3.62	34.77	37.49	1.89	0.00	13.08	5.35	0.35	6.06	11.55	0.25	0.32	13.06	17.73	3.86	3.67	9.07	6.54	5.62	2.91	22.31	59.09	6.45	55.67	33.89	10.68	8.02	4.97	29.46
27	E5_Da	NovelBoundary	0	2.77	4.07	1.54	0.00	0.00	0.00	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	3.05	0.00	0.00	0.00	0.00	0.00
28	E5a_E6a	KnownJunction	0	2.89	43.82	42.70	9.92	0.00	14.50	5.72	0.00	10.08	7.95	0.00	0.00	12.29	23.15	17.14	9.41	10.31	4.62	0.00	0.00	24.55	62.33	5.86	57.00	28.38	5.58	14.11	9.84	21.69
29	I5	Intron	0	0.00	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.16	2.10	0.00	0.00	0.00	0.00
30	I5_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	2.14	0.00	0.00	0.00	0.00
31	E6_Aa	NovelBoundary	0	3.01	4.36	4.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	2.02	0.00
32	ER6a	ExonRegion	0	7.14	43.28	32.70	5.70	0.00	15.40	2.61	3.67	7.58	10.87	5.21	1.99	9.80	15.12	10.02	6.66	7.09	10.34	0.00	2.45	12.34	57.41	5.09	44.54	27.67	6.88	17.06	12.44	20.91
33	E6_Da	NovelBoundary	0	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.37	0.00	0.00	0.00	0.00	1.68
34	E6a_E7a	KnownJunction	0	5.54	58.17	35.90	0.00	0.00	13.85	0.00	2.19	7.77	13.74	15.91	4.28	9.46	14.60	25.51	6.73	10.60	14.64	0.00	0.00	20.66	60.04	8.72	36.01	27.28	12.23	27.58	8.90	17.96
35	I6	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.06	1.12	0.62	0.00	1.28	0.00
36	I6_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00
37	I6_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.80	0.00	0.00	0.00	0.00	0.00	0.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.58	1.04	0.68	0.00	1.41	0.00
38	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.23	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	1.97	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER7a	ExonRegion	0	8.17	36.23	25.55	0.00	0.00	13.38	4.95	3.58	9.42	10.12	4.09	1.98	9.61	12.89	6.01	4.11	4.40	6.31	0.00	5.12	11.06	51.76	8.63	38.13	21.97	14.63	9.78	7.93	29.12
40	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E7a_E8a	KnownJunction	0	2.95	18.32	7.50	0.00	0.00	3.91	7.61	2.54	8.22	12.70	1.61	1.54	11.40	3.37	0.00	0.00	0.00	4.62	0.00	0.00	7.70	29.51	2.51	13.40	21.67	22.01	7.21	12.58	16.61
42	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER8a	ExonRegion	0	6.62	22.41	14.22	0.00	0.00	14.92	3.20	3.14	16.79	12.74	5.18	2.44	6.38	5.31	6.26	0.00	3.15	6.98	0.00	0.25	10.57	36.53	3.94	36.82	15.89	11.51	7.97	7.48	16.03
44	E8a_E9a	KnownJunction	0	16.34	22.20	12.98	0.00	0.00	23.98	0.00	2.54	24.30	11.66	9.81	1.54	3.03	6.54	9.97	0.00	2.72	9.25	0.00	0.00	11.03	50.08	3.94	46.42	17.96	13.99	5.02	4.49	12.78
45	I8_SR1	SilentIntronRegion	0	1.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E9_Aa	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55
47	ER9a	ExonRegion	0	18.92	29.56	23.85	0.00	0.00	23.84	3.11	3.95	24.94	11.26	8.81	2.12	7.57	9.54	15.04	2.24	4.75	3.51	0.00	4.34	13.12	70.26	10.69	58.57	26.75	15.63	22.97	5.03	16.60
48	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	2.48	0.00	6.10	0.00	0.00	0.00	0.00	0.00
49	E9a_E10a	KnownJunction	0	11.80	30.73	21.63	0.00	0.00	13.93	5.32	5.08	14.50	3.83	0.00	1.60	8.06	11.79	0.00	3.82	4.21	0.00	0.00	8.27	15.28	70.15	18.81	65.56	21.63	8.67	29.77	9.03	20.50
50	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	2.05	0.00	0.00	3.05	0.00	0.00	0.00	2.25	0.00
51	ER10a	ExonRegion	0	3.88	6.74	14.97	0.00	0.00	4.08	1.83	0.51	7.11	1.79	0.25	1.08	3.62	2.94	0.07	1.03	2.36	1.73	0.00	2.41	4.68	29.03	3.22	18.98	7.52	8.02	5.69	4.08	9.91
52	IG8_AR1	ActiveIntergenicRegion	0	31.38	292.11	0.00	287.77	256.00	101.92	29.51	16.52	95.36	129.54	163.54	58.99	97.53	54.40	226.67	89.28	0.13	175.32	333.24	54.50	112.49	50.01	99.05	212.31	125.54	86.09	219.70	117.77	35.49