Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C19orf25	Gene	0	101.54	32.03	101.19	80.71	51.42	48.70	104.67	186.37	62.12	56.42	23.91	36.72	76.58	57.48	76.83	57.43	98.67	65.35	44.54	103.30	46.82	147.98	74.08	69.96	50.05	57.20	19.83	52.49	62.58
2	436106	Transcript	0	3.04	2.76	4.38	12.27	8.52	1.95	5.01	5.58	0.69	1.91	1.77	2.03	5.32	1.84	1.81	10.04	6.59	7.75	0.73	4.81	4.42	8.37	3.56	1.60	0.88	6.84	0.47	10.41	5.89
3	335104	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	427685	Transcript	0	4.99	0.00	2.03	0.00	4.11	2.57	6.01	2.13	2.89	3.32	0.25	0.00	1.03	2.99	0.98	3.81	10.04	4.96	2.02	2.58	1.53	1.57	0.77	3.86	0.61	1.17	1.92	2.49	1.06
5	IG44_AR1	ActiveIntergenicRegion	0	3.01	0.00	0.52	3.35	2.29	2.57	0.94	1.72	0.35	0.45	0.37	0.58	2.83	0.42	0.00	0.00	0.23	1.22	0.00	0.86	0.44	3.94	2.91	0.67	0.22	0.00	0.00	0.51	1.13
6	ER1a	ExonRegion	0	3.04	2.76	4.38	12.27	8.52	1.95	5.01	5.58	0.69	1.91	1.77	2.03	5.32	1.84	1.81	10.04	6.59	7.75	0.73	4.81	4.42	8.37	3.56	1.60	0.88	6.84	0.47	10.41	5.89
7	ER1b	ExonRegion	1	93.72	21.53	63.74	165.14	137.68	46.93	80.57	110.11	22.25	54.54	24.93	27.38	60.48	26.71	48.85	129.98	82.50	99.31	25.27	69.64	37.56	192.09	87.25	51.15	36.29	101.33	19.38	142.63	81.46
8	E1_Da	NovelBoundary	0	7.20	0.00	4.86	27.39	6.19	7.37	4.86	11.05	2.50	7.47	0.00	1.45	4.17	2.84	0.00	17.37	5.40	9.89	0.00	10.75	9.51	8.65	6.21	7.18	6.97	5.32	0.00	5.84	8.58
9	E1a_E2a	KnownJunction	1	206.98	31.70	136.51	370.34	263.50	83.49	174.39	180.80	41.42	107.77	43.28	63.97	105.76	51.49	145.30	211.75	179.78	125.09	72.61	126.78	67.83	365.36	171.59	121.78	82.59	191.23	39.46	269.50	143.87
10	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I1	Intron	0	1.27	0.00	0.66	0.00	1.92	1.09	0.40	0.73	1.11	0.86	0.00	0.25	0.00	0.72	4.93	2.32	1.78	3.82	1.27	2.43	0.85	3.22	2.15	0.85	0.57	0.31	0.00	0.65	3.73
12	I1_AR1	ActiveIntronRegion	0	1.28	0.00	0.67	0.00	1.93	1.10	0.40	0.74	1.12	0.87	0.00	0.25	0.00	0.73	4.94	2.34	1.79	3.84	1.28	2.44	0.86	3.24	2.17	0.85	0.57	0.31	0.00	0.65	3.76
13	E2_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.92	0.00	0.00	2.74	0.00	0.00	0.00	0.00	1.04	8.17	0.00	4.19	0.00	8.09	0.00	1.68	0.00	0.00	3.05	0.00	0.00	0.00	1.98	3.53
14	E2_Ab	NovelBoundary	0	4.84	0.00	0.00	0.00	0.00	3.61	0.00	2.34	1.16	1.64	0.00	0.00	0.00	2.24	0.00	0.00	1.33	0.00	0.00	0.00	0.00	2.09	1.92	2.93	0.00	1.80	0.00	0.00	0.00
15	ER2a	ExonRegion	1	146.47	29.56	113.70	307.13	209.22	71.94	135.73	160.79	33.33	94.33	40.46	48.65	90.93	45.65	95.21	183.06	134.90	133.73	51.29	103.99	55.63	301.66	150.69	86.05	66.70	173.40	32.97	228.75	125.72
16	ER2b	ExonRegion	0	75.92	8.12	69.38	92.17	50.43	28.10	64.10	98.90	22.44	34.11	14.43	22.37	36.42	34.43	36.25	47.02	76.89	47.79	11.68	60.96	26.89	135.48	50.95	61.35	31.47	51.13	7.14	59.69	52.97
17	E2_Da	KnownBoundary	0	8.49	0.00	1.30	0.00	0.00	0.00	0.00	4.58	1.64	0.00	0.00	0.00	1.37	1.09	0.00	3.75	8.42	0.00	0.00	6.62	0.00	6.08	0.00	8.25	0.00	2.19	0.00	1.84	3.43
18	E2a_E3a	KnownJunction	0	148.88	13.48	35.93	28.47	12.38	71.71	52.24	209.12	42.36	9.55	11.64	11.29	31.40	40.64	68.96	40.93	29.82	28.51	16.18	97.34	31.41	271.82	42.35	103.66	41.94	17.12	2.53	9.80	34.83
19	ER2c	ExonRegion	0	9.99	0.00	2.96	0.00	8.22	5.13	12.01	4.27	5.78	6.64	0.51	0.00	2.07	5.99	1.96	7.61	20.08	9.92	4.04	5.15	3.07	3.14	1.54	7.73	1.21	2.34	3.85	4.99	2.11
20	E2_Db	NovelBoundary	0	8.55	0.00	4.31	0.00	0.00	3.76	2.92	0.00	10.23	5.75	0.00	1.45	3.53	8.97	9.97	7.65	17.85	13.87	0.00	4.13	5.66	0.00	0.00	2.57	5.04	4.08	2.34	2.29	4.32
21	E2b_E3a	KnownJunction	0	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	I2	Intron	0	8.02	4.06	4.72	2.57	4.47	3.83	2.57	5.05	5.76	5.00	1.80	1.94	1.76	5.29	5.13	4.75	20.37	8.57	2.29	2.41	3.40	2.65	1.29	7.36	2.56	1.19	0.80	4.47	3.49
23	I2_AR1	ActiveIntronRegion	0	8.41	2.11	0.00	9.38	3.19	2.70	1.32	4.82	2.20	2.81	0.00	0.00	1.70	4.44	3.02	1.62	1.95	6.51	2.09	1.77	1.87	1.18	0.00	4.22	1.87	0.00	0.00	1.07	0.88
24	I2_SR1	SilentIntronRegion	0	3.96	3.00	1.55	0.51	4.89	3.73	1.08	0.66	4.51	2.70	1.94	1.87	1.14	3.21	7.89	3.98	9.55	7.39	1.82	0.49	2.39	1.07	1.61	4.39	2.57	1.12	0.00	2.57	0.85
25	I2_AR2	ActiveIntronRegion	0	9.26	4.57	6.13	2.63	4.45	3.96	3.14	6.46	6.46	5.91	1.91	2.13	1.96	6.02	4.46	5.27	25.36	9.13	2.46	3.07	3.86	3.28	1.31	8.57	2.62	1.31	1.12	5.37	4.54
26	E3_Aa	NovelBoundary	0	21.65	4.17	14.65	28.04	11.79	13.28	20.60	21.60	18.61	15.58	2.91	8.40	1.62	11.37	42.06	6.04	40.43	9.25	8.09	24.31	11.27	13.22	12.71	10.89	5.00	6.57	11.68	12.49	12.38
27	ER3a	ExonRegion	0	150.01	28.57	62.71	54.53	23.36	76.12	149.93	235.25	52.35	74.29	25.03	39.37	86.97	62.48	78.65	89.23	107.58	93.00	39.33	142.54	59.98	190.00	108.76	88.81	49.84	53.49	14.76	46.32	51.95
28	E3_Da	KnownBoundary	0	101.69	36.07	95.60	58.02	46.57	46.81	127.25	193.79	64.07	55.36	38.50	72.38	110.88	51.78	70.96	45.98	164.66	104.03	24.28	156.22	40.03	169.87	128.94	55.81	32.81	62.57	36.73	85.01	70.88
29	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER3b	ExonRegion	0	148.48	29.97	154.10	132.70	92.91	82.94	170.48	243.87	85.36	72.16	30.21	56.06	96.30	76.13	120.19	65.88	133.59	91.66	46.48	159.48	56.59	192.69	118.84	75.92	57.83	76.90	26.16	61.94	56.94
31	E3_Ab	KnownBoundary	0	111.95	38.20	193.84	227.34	91.52	79.46	139.32	196.28	40.93	48.85	29.77	40.99	62.77	74.00	85.11	106.95	117.86	97.09	89.02	177.47	64.38	188.68	102.93	44.08	31.71	65.70	11.33	45.43	41.53
32	ER3c	ExonRegion	0	212.63	57.63	233.20	193.86	108.66	89.83	237.08	383.85	108.93	109.83	51.00	75.88	149.30	110.36	158.93	93.80	186.28	120.83	78.61	198.02	92.16	290.44	158.76	118.75	96.00	105.10	31.02	89.71	96.42
33	E3_Db	KnownBoundary	0	234.35	66.02	194.78	178.59	107.58	105.63	332.65	468.94	151.29	164.94	94.33	113.73	223.10	142.60	175.00	124.23	273.94	162.72	121.16	163.33	105.57	318.54	234.18	144.16	148.40	143.98	73.55	154.20	191.38
34	ER3d	ExonRegion	0	89.83	33.70	94.00	67.03	44.55	44.52	90.68	176.17	64.10	52.86	22.33	34.39	74.43	55.70	72.99	52.88	92.77	59.43	46.67	96.67	44.47	134.55	64.73	68.07	49.17	53.60	20.75	48.32	64.46