Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C17orf99	Gene	0	4.09	2.74	3.43	1.58	15.30	3.12	1.50	5.69	3.90	3.65	2.20	5.39	3.62	2.04	87.33	77.04	12.20	28.13	3.91	5.43	4.13	14.45	5.05	12.53	44.33	98.97	5.93	3.70	5.81
2	340363	Transcript	0	0.00	0.00	2.82	0.00	15.58	1.00	0.00	0.65	0.05	0.13	0.30	1.98	1.12	0.01	20.36	49.64	3.21	6.84	1.35	0.90	0.63	10.27	5.22	5.09	24.16	61.24	6.92	0.00	6.71
3	451352	Transcript	0	2.44	2.04	1.04	0.84	3.61	1.63	1.15	1.61	3.07	2.56	1.15	1.81	1.41	1.41	26.61	19.42	4.63	6.85	2.67	1.45	2.82	1.80	1.02	3.45	8.76	13.68	1.37	2.73	1.69
4	ER1a	ExonRegion	0	0.00	0.00	0.49	0.00	2.76	2.29	0.00	0.00	0.00	0.80	0.00	1.65	0.72	0.00	13.70	18.84	0.87	6.79	0.00	1.10	0.00	3.43	2.38	0.00	11.50	20.29	1.97	0.00	6.24
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	3.06	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.17	27.54	2.79	0.00	0.00	0.00	0.00	4.28	2.27	0.00	17.47	14.08	7.40	0.00	13.44
7	I1	Intron	0	0.00	0.00	0.58	1.25	17.06	0.72	0.00	0.00	0.00	0.76	0.00	1.08	0.00	0.00	14.63	17.52	2.35	13.57	0.00	1.44	0.50	6.61	2.84	1.88	4.99	30.19	1.92	0.00	0.23
8	I1_SR1	SilentIntronRegion	0	0.00	0.00	0.64	1.37	17.02	0.72	0.00	0.00	0.00	0.62	0.00	1.14	0.00	0.00	15.41	18.27	2.58	14.47	0.00	1.54	0.53	6.69	2.89	1.83	5.35	31.34	2.11	0.00	0.26
9	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	10.78	63.52	0.00	0.00	0.00	0.00	1.52	0.00	2.41	0.00	0.00	70.56	78.26	4.88	23.12	0.00	0.00	0.00	20.18	7.29	4.79	42.73	102.31	4.32	0.00	1.91
10	I1_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	18.89	0.74	0.00	0.00	0.00	2.29	0.00	0.52	0.00	0.00	7.23	10.76	0.00	4.78	0.00	0.47	0.18	6.31	2.56	2.60	1.43	19.91	0.00	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	2.55	0.00	23.10	1.12	0.00	1.28	0.00	0.00	0.43	1.57	0.12	0.00	22.40	68.64	5.19	10.50	0.00	0.51	0.13	10.16	7.01	8.93	34.09	50.82	16.15	0.00	10.37
12	E2_Da	NovelBoundary	0	0.00	4.27	1.40	0.00	6.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	17.74	11.32	1.06	4.62	0.00	4.13	0.00	6.76	0.00	0.00	8.33	35.92	0.00	0.00	1.52
13	E2a_E4a	KnownJunction	0	0.00	0.00	6.85	0.00	58.65	1.96	0.00	2.54	0.00	0.00	0.00	3.31	1.53	0.00	34.68	146.42	6.37	9.25	0.00	0.00	1.60	25.04	13.54	15.07	68.65	203.11	14.56	0.00	6.77
14	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	8.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00
15	I2	Intron	0	0.84	0.36	0.94	0.88	19.73	0.77	0.16	0.68	0.29	1.24	0.69	1.12	0.56	0.12	48.55	20.56	5.13	15.14	1.04	0.99	2.23	3.95	1.34	5.37	28.92	52.98	2.52	0.33	2.89
16	I2_SR1	SilentIntronRegion	0	0.99	0.00	1.14	0.00	15.98	0.54	0.00	1.44	0.22	0.72	0.35	0.66	0.63	0.18	38.47	25.01	5.10	14.72	0.93	1.87	1.87	6.07	0.39	4.16	16.32	41.77	1.07	0.00	1.28
17	I2_AR1	ActiveIntronRegion	0	1.09	0.00	0.97	0.00	18.11	0.27	0.19	0.18	0.00	2.07	1.03	1.61	0.56	0.17	34.81	24.54	6.76	16.90	0.31	1.34	1.72	3.55	0.49	6.05	31.13	40.08	1.59	0.16	1.64
18	I2_SR2	SilentIntronRegion	0	0.78	0.47	0.90	1.15	20.54	0.88	0.18	0.64	0.34	1.20	0.69	1.11	0.55	0.11	52.15	19.30	4.89	14.94	1.16	0.81	2.37	3.70	1.61	5.45	30.48	56.62	2.88	0.40	3.32
19	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	12.23	0.00	0.00	0.00	0.00	0.00	0.00	1.75	1.66	0.00	78.93	68.31	8.44	18.49	0.00	0.00	0.00	0.00	0.00	11.78	83.80	48.88	0.00	0.00	1.45
20	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	21.66	0.00	0.00	0.00	4.66	0.00	0.00	1.87	0.00	0.00	118.20	24.40	17.96	46.62	0.00	0.00	5.94	2.48	0.00	14.59	60.81	57.89	7.16	0.00	0.00
21	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.08	0.00	0.00	0.00	0.00	0.24	0.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00
22	E4_Aa	NovelBoundary	0	5.25	0.00	0.00	0.00	13.41	0.00	0.00	5.08	0.00	4.07	0.00	1.23	4.46	0.00	138.33	98.22	12.92	38.53	8.09	0.00	6.34	2.19	2.02	24.17	101.80	47.59	4.92	0.00	2.51
23	ER4a	ExonRegion	0	4.51	0.39	7.45	1.22	53.40	3.50	0.69	2.96	0.21	2.21	3.67	11.39	5.14	1.12	164.53	168.35	22.73	68.27	2.17	10.28	3.38	45.19	12.21	29.60	116.52	289.08	17.07	0.55	14.38
24	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	13.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72	0.00	16.54	3.67	0.90	4.62	0.00	0.00	0.00	1.99	0.00	5.98	3.60	18.37	0.00	0.00	1.91
25	E4a_E5a	KnownJunction	0	2.42	0.00	2.79	0.00	7.22	5.10	0.00	2.34	1.40	0.00	1.52	7.35	2.55	0.93	127.96	91.26	16.36	70.38	0.00	3.47	0.00	39.62	1.87	13.76	47.47	231.91	7.60	0.00	4.82
26	I4	Intron	0	0.00	0.00	0.28	0.40	8.71	0.31	0.00	0.00	0.44	0.89	0.00	0.72	0.22	0.00	26.74	10.89	2.25	5.19	0.00	0.31	0.80	0.91	0.20	3.00	8.05	18.13	0.51	0.09	1.42
27	I4_SR1	SilentIntronRegion	0	0.00	0.00	0.28	0.40	8.73	0.31	0.00	0.00	0.44	0.89	0.00	0.72	0.22	0.00	26.80	10.92	2.25	5.20	0.00	0.31	0.80	0.91	0.20	3.00	8.07	18.17	0.51	0.09	1.42
28	E5_Aa	NovelBoundary	0	0.00	0.00	1.35	0.00	7.37	0.00	0.00	12.34	0.00	0.00	0.00	0.00	0.00	0.00	41.06	32.51	3.35	9.25	0.00	0.00	0.00	0.00	0.00	11.78	16.06	14.25	0.00	0.00	0.00
29	ER5a	ExonRegion	0	3.49	1.05	7.88	2.71	29.83	3.26	0.00	21.48	0.93	1.91	2.77	11.35	7.13	0.55	185.71	202.94	22.87	78.12	3.29	15.68	1.77	48.23	13.66	30.28	116.69	328.14	9.84	1.83	9.53
30	E5_Da	KnownBoundary	0	0.00	0.00	1.12	0.00	6.19	0.00	0.00	4.98	0.00	0.00	0.00	1.51	0.00	0.00	36.28	42.07	3.33	10.02	0.00	0.00	0.00	6.42	0.00	0.00	7.12	6.01	0.00	1.66	0.00
31	E5a_E5b	KnownJunction	0	0.00	0.00	3.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.36	3.07	4.36	0.00	34.08	33.05	2.79	10.66	8.09	3.31	2.05	18.13	4.53	6.04	8.83	75.40	0.00	0.00	3.20
32	ER5b	ExonRegion	0	4.87	4.08	2.09	1.68	7.23	3.22	2.29	3.22	6.14	5.12	2.23	3.62	2.82	2.82	53.21	38.60	9.06	13.69	5.34	2.89	5.63	3.61	2.04	6.91	17.53	27.11	2.74	5.46	3.38
33	E5_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	50.03	30.14	9.12	13.87	0.00	0.00	0.00	0.00	2.12	0.00	5.46	18.37	5.07	0.00	0.00
34	ER5c	ExonRegion	0	2.47	1.23	3.85	1.37	10.02	3.09	0.39	10.57	0.84	0.83	1.19	5.38	5.07	1.47	146.21	102.80	14.59	29.76	0.94	7.29	1.48	14.81	7.04	14.73	64.22	116.51	8.80	1.54	6.73
35	ER5d	ExonRegion	0	0.00	0.00	0.00	0.00	3.40	0.62	0.00	0.08	0.31	0.00	0.00	2.25	0.00	0.08	8.15	3.34	1.27	3.85	0.00	0.51	0.00	0.57	1.56	0.49	4.42	3.71	1.42	0.00	0.24
36	IG25	Intergenic	0	0.39	0.15	0.15	0.00	6.17	0.19	0.00	0.17	0.10	0.07	0.21	0.58	0.44	0.00	17.95	5.65	0.94	6.66	0.43	0.25	0.90	0.98	1.06	1.65	4.71	10.13	0.33	0.37	1.24
37	IG25_SR1	SilentIntergenicRegion	0	0.38	0.00	0.20	0.00	6.99	0.24	0.00	0.11	0.13	0.08	0.28	0.65	0.23	0.00	20.76	6.55	1.05	5.53	0.37	0.32	0.84	0.97	0.85	1.83	5.19	11.79	0.11	0.48	1.45
38	IG25_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	4.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.80	5.06	1.00	2.73	0.00	0.00	0.00	1.80	0.00	2.15	0.00	13.36	0.00	0.00	0.00
39	IG25_SR2	SilentIntergenicRegion	0	0.49	0.41	0.00	0.00	3.81	0.00	0.00	0.42	0.00	0.00	0.00	0.42	0.95	0.00	6.77	2.36	0.53	8.65	0.14	0.00	0.98	1.03	1.81	1.17	3.14	4.96	1.15	0.00	0.48
40	IG25_AR2	ActiveIntergenicRegion	0	0.00	2.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.87	0.00	20.28	4.19	0.79	25.97	4.53	0.00	2.51	0.37	1.87	0.00	3.25	0.00	0.76	0.00	1.02