Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CBX8	Gene	0	7.48	11.38	23.18	14.66	7.47	15.73	11.73	21.94	16.43	24.86	15.65	17.92	18.21	20.20	34.96	26.80	18.85	19.08	20.54	23.27	17.58	9.43	12.03	19.97	26.00	20.75	11.46	11.00	12.21
2	485449	Transcript	0	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.00	0.00	0.00	0.00	0.00	0.69	0.55	0.19	0.98	0.54	0.00	0.00	0.00	0.51	0.36	0.44	0.80	0.00	0.00	0.00
3	427800	Transcript	0	0.00	0.00	0.00	9.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
4	413392	Transcript	0	0.61	0.04	0.00	0.00	0.00	0.40	0.00	0.00	0.01	0.02	0.00	0.00	0.00	0.28	0.00	0.00	0.00	0.55	0.00	0.00	0.02	0.01	0.02	0.02	0.02	0.01	0.00	0.00	0.00
5	269385	Transcript	0	4.58	7.66	26.36	34.29	7.86	15.80	14.28	21.28	15.94	23.08	14.13	18.78	14.36	22.12	24.27	26.41	25.71	17.54	14.06	22.91	19.46	10.03	14.26	19.80	19.20	19.32	10.81	15.42	12.70
6	ER1a	ExonRegion	0	0.72	0.00	0.00	0.00	0.00	0.00	0.00	0.62	0.00	0.00	0.00	0.00	0.00	0.00	1.37	1.11	0.38	1.95	1.08	0.00	0.00	0.00	1.03	0.73	0.89	1.59	0.00	0.00	0.00
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.37	3.52	1.13	0.00	0.00	0.00	0.00	0.00	2.36	0.00	1.52	0.00	2.24	0.00	0.00
8	ER1b	ExonRegion	0	0.03	0.00	0.68	0.61	0.00	0.00	0.05	0.04	0.04	0.01	0.00	0.05	0.00	0.00	0.38	0.65	0.20	0.74	2.67	0.00	0.02	0.00	0.42	0.00	0.09	0.62	0.00	0.04	0.00
9	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	9.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.36	0.00	0.00	3.82	0.00	0.00	0.00
13	ER2a	ExonRegion	0	1.21	0.07	0.00	0.00	0.00	0.79	0.00	0.00	0.02	0.05	0.00	0.00	0.00	0.56	0.00	0.00	0.00	1.09	0.00	0.00	0.05	0.02	0.04	0.05	0.03	0.02	0.00	0.00	0.00
14	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	0.00	0.00	1.00	0.00	3.37	0.00	0.00	8.09	0.00	3.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E3_Aa	NovelBoundary	1	0.00	0.00	2.69	0.00	0.00	8.75	0.00	0.00	0.00	5.19	0.00	1.45	1.46	2.99	0.00	7.42	0.00	0.00	7.87	0.00	3.97	0.00	7.24	0.00	1.93	5.36	4.08	12.63	0.00
17	ER3a	ExonRegion	0	6.43	8.66	38.10	74.85	19.98	23.69	18.95	22.09	18.99	25.12	17.33	25.10	16.47	29.20	25.25	45.12	38.17	24.74	26.28	29.07	25.65	17.79	20.37	25.69	24.66	35.84	10.96	24.72	18.24
18	E3a_E4a	KnownJunction	0	3.01	3.78	23.59	21.14	0.00	10.78	18.08	26.77	13.89	21.13	10.76	15.99	10.70	23.73	17.34	13.31	24.92	13.87	0.00	23.73	16.20	6.56	14.09	17.47	8.94	7.08	9.99	14.20	11.03
19	I3	Intron	0	0.75	1.69	2.63	6.26	0.00	1.92	0.35	1.93	1.08	1.51	2.49	1.94	0.79	2.29	3.68	5.51	3.13	2.36	3.35	4.33	1.99	0.31	0.32	1.88	4.99	3.57	1.28	4.27	0.47
20	I3_AR1	ActiveIntronRegion	0	0.75	1.70	2.65	6.30	0.00	1.93	0.35	1.94	1.08	1.52	2.51	1.95	0.80	2.31	3.71	5.55	3.15	2.37	3.37	4.36	2.00	0.32	0.32	1.89	5.03	3.59	1.29	4.30	0.47
21	E4_Aa	NovelBoundary	0	2.60	4.75	1.05	0.00	0.00	16.96	2.57	2.54	2.74	3.24	6.83	1.87	1.97	4.74	8.77	13.39	8.98	4.62	16.18	28.86	12.80	4.47	0.00	11.36	7.54	2.19	0.00	7.91	1.75
22	ER4a	ExonRegion	0	7.02	16.50	24.79	24.76	2.94	32.09	28.04	57.03	22.42	41.94	16.23	30.75	24.39	47.46	42.51	39.11	26.57	21.90	21.91	44.78	43.25	32.53	17.59	55.20	37.75	39.36	10.61	35.16	28.16
23	E4_Da	NovelBoundary	0	5.25	0.00	0.00	0.00	0.00	8.48	0.00	4.33	0.00	6.07	3.10	1.51	0.00	5.23	8.37	10.40	4.88	32.36	8.09	11.00	7.46	0.00	0.00	10.41	3.26	3.95	0.00	2.29	3.57
24	E4a_E5a	KnownJunction	1	16.40	13.57	19.58	18.77	7.37	46.92	30.15	60.86	38.31	53.77	24.67	33.76	31.49	59.60	58.20	54.47	28.70	50.86	24.28	61.78	55.43	51.78	13.49	88.41	65.88	62.83	10.83	51.13	24.26
25	I4	Intron	0	1.31	2.95	1.02	4.38	0.00	2.94	2.46	2.81	1.72	0.88	2.18	0.56	0.00	0.97	4.23	1.52	0.91	1.76	5.85	0.84	2.18	0.00	0.00	3.28	2.18	0.48	0.00	0.00	0.00
26	I4_SR1	SilentIntronRegion	0	1.33	2.99	1.03	4.43	0.00	2.97	2.49	2.85	1.74	0.89	2.21	0.57	0.00	0.97	4.28	1.52	0.92	1.79	5.92	0.85	2.20	0.00	0.00	3.32	2.20	0.49	0.00	0.00	0.00
27	E5_Aa	NovelBoundary	0	0.00	0.00	2.69	0.00	0.00	3.22	0.00	0.00	9.68	0.00	0.00	1.54	0.00	1.99	0.00	0.00	3.74	9.25	0.00	0.00	0.00	2.43	0.00	6.10	0.00	0.00	0.00	0.00	3.47
28	ER5a	ExonRegion	0	28.22	38.97	18.63	3.10	1.81	52.97	40.80	80.00	50.95	71.18	44.00	41.64	42.49	86.29	88.59	95.52	54.82	70.09	67.68	88.96	55.46	42.83	32.00	75.94	80.67	75.34	19.40	34.33	38.84
29	E5_Da	NovelBoundary	0	5.72	4.85	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	1.20	1.33	0.00	0.00	0.00	0.00	1.22	4.62	8.09	0.00	3.53	1.90	0.00	0.00	3.18	0.00	0.00	0.00	0.00
30	E5a_E6a	KnownJunction	0	21.82	42.66	15.17	0.00	0.00	46.89	59.16	85.80	53.72	86.88	48.94	55.90	43.21	83.53	94.28	114.44	88.30	67.55	153.76	72.11	52.26	22.85	56.54	59.22	106.15	107.29	45.77	54.01	60.15
31	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	1.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	0.00	3.56	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	I5	Intron	0	0.00	0.00	0.68	0.00	0.00	1.67	1.63	0.75	1.82	0.58	0.00	0.00	1.05	0.37	0.00	0.00	0.60	0.78	3.88	0.00	0.00	0.73	0.00	0.87	0.58	0.00	0.00	0.00	0.54
33	I5_SR1	SilentIntronRegion	0	0.00	0.00	0.69	0.00	0.00	1.70	1.66	0.76	1.85	0.59	0.00	0.00	1.07	0.37	0.00	0.00	0.61	0.79	3.94	0.00	0.00	0.74	0.00	0.88	0.59	0.00	0.00	0.00	0.55
34	E6_Aa	NovelBoundary	0	5.96	0.00	1.22	0.00	22.11	1.57	0.00	2.29	1.49	0.00	0.00	0.00	0.00	0.00	9.57	3.82	0.00	0.00	0.00	0.00	0.00	2.48	0.00	3.05	1.67	0.00	0.00	0.00	0.00
35	ER6a	ExonRegion	0	19.84	32.26	30.51	9.82	15.61	47.29	48.92	59.66	28.84	65.53	51.80	59.26	46.34	69.90	96.38	68.67	67.25	58.41	67.21	67.29	46.20	20.37	41.75	42.99	64.06	102.65	37.70	55.37	47.74
36	E6_Da	NovelBoundary	0	0.00	0.00	1.22	0.00	0.00	3.22	2.23	11.25	2.98	0.00	0.00	1.51	0.00	4.05	0.00	0.00	2.07	13.87	16.18	3.47	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	4.13
37	E6a_E7a	KnownJunction	0	15.99	24.82	59.05	29.33	14.74	24.02	29.75	60.47	19.06	43.14	28.98	46.72	21.62	53.60	95.47	36.11	58.05	36.99	8.09	54.17	28.64	8.85	18.03	41.63	52.36	50.94	44.38	40.35	28.42
38	I6_SR1	SilentIntronRegion	0	0.65	0.00	1.02	0.00	0.00	1.92	2.31	0.93	1.62	2.55	2.54	1.49	0.00	2.79	4.44	2.99	3.15	3.59	3.03	1.86	0.00	1.08	0.00	3.08	0.86	2.37	1.66	1.95	0.47
39	E7_Aa	NovelBoundary	0	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	2.28	0.00	0.00	0.00	0.00	0.00	0.00	3.14	1.04	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER7a	ExonRegion	0	19.58	13.26	63.79	81.68	32.70	33.12	25.18	46.56	21.88	40.99	27.34	31.08	34.30	44.35	69.65	38.08	42.16	41.78	42.43	61.58	26.39	19.33	24.18	35.92	38.66	40.98	12.98	24.18	24.39
41	E7_Da	KnownBoundary	0	23.65	8.34	33.19	16.39	0.00	30.12	31.75	48.82	16.08	38.75	22.68	26.87	29.77	33.19	106.64	38.17	26.38	60.11	8.09	56.65	24.95	16.72	14.18	26.68	31.56	28.11	16.10	14.78	13.73
42	ER7b	ExonRegion	0	22.93	16.52	46.99	27.45	21.63	23.16	35.74	50.21	26.27	36.96	21.68	27.99	30.50	43.61	58.96	54.41	33.53	37.99	38.71	49.66	19.57	22.92	24.12	33.41	35.83	36.08	13.63	18.61	20.71
43	E7_Db	KnownBoundary	0	24.01	16.77	91.44	46.16	24.32	12.39	26.66	62.41	34.05	35.79	21.13	20.39	25.60	44.05	93.88	46.97	34.26	47.01	48.55	63.60	15.28	27.18	22.01	41.09	34.85	23.65	16.45	15.77	28.56
44	ER7c	ExonRegion	0	20.72	21.34	66.03	19.91	21.12	24.23	35.63	57.95	29.90	31.60	21.84	31.99	36.44	43.33	72.01	50.45	29.89	39.65	37.93	50.39	19.44	21.77	32.77	36.26	46.51	32.53	18.22	19.01	31.29
45	E7_Dc	KnownBoundary	0	21.12	22.10	33.51	29.55	14.15	18.88	31.24	45.88	47.54	54.37	34.77	35.36	51.08	37.27	146.30	64.95	29.42	37.76	72.83	54.25	7.18	20.03	20.78	36.31	69.25	38.06	11.28	25.93	37.80
46	ER7d	ExonRegion	0	4.30	10.54	17.37	6.88	3.61	12.92	5.82	14.97	14.94	22.98	14.30	15.24	15.90	13.42	30.21	20.79	14.05	14.01	15.91	15.94	16.51	5.73	8.32	16.24	23.99	15.04	11.49	7.35	8.84
47	IG50_AR2	ActiveIntergenicRegion	0	1.28	2.85	1.25	0.00	1.31	4.08	0.90	3.28	14.73	3.94	10.05	11.01	12.86	1.14	2.46	2.60	0.83	7.17	3.34	1.48	9.12	0.58	2.66	4.18	1.92	2.67	10.66	1.95	1.91
48	IG50_SR1	SilentIntergenicRegion	0	0.00	5.00	0.00	0.00	1.13	3.41	0.00	2.34	12.56	2.53	12.36	7.06	9.59	0.02	12.47	10.70	1.75	7.69	2.06	3.19	2.07	1.80	5.75	0.00	0.00	1.14	7.78	0.00	0.00
49	IG50_AR1	ActiveIntergenicRegion	0	0.61	3.31	2.87	0.00	0.70	8.07	0.58	7.12	11.00	7.09	12.37	15.69	10.51	2.27	1.89	3.35	3.90	5.06	13.48	0.96	5.72	0.52	5.03	8.92	0.82	3.83	3.78	2.33	3.26