Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SUPT4H1	Gene	0	1010.42	511.64	615.89	1247.83	961.95	411.63	1070.66	718.59	617.73	543.43	554.38	553.25	710.20	506.35	1125.79	384.07	561.06	307.36	760.27	1021.36	398.95	1177.11	450.84	615.81	970.32	773.80	545.90	540.94	360.94
2	225504	Transcript	0	1505.07	787.05	662.99	1081.70	861.82	599.98	1886.42	1065.06	747.09	792.36	889.29	1021.93	1113.37	713.17	2062.43	617.29	1048.30	498.95	1449.83	1567.78	498.26	1675.21	753.75	788.37	1454.04	1221.50	876.68	913.58	635.15
3	ER1a	ExonRegion	0	696.49	352.69	1081.63	4198.81	3002.59	230.86	767.72	440.79	266.59	335.86	430.25	658.20	675.78	281.44	827.70	391.80	617.89	227.34	633.18	741.62	206.06	888.64	447.37	349.20	621.82	685.66	526.98	553.49	413.68
4	E1_Da	NovelBoundary	0	148.64	143.87	154.32	96.41	49.66	145.49	101.84	30.61	123.64	205.44	31.13	107.44	68.59	114.93	126.57	148.56	211.83	401.73	128.81	56.90	79.82	179.25	147.16	79.08	147.45	202.25	124.39	72.34	93.10
5	E1a_E2a	KnownJunction	0	221.31	125.36	624.19	502.35	293.86	87.29	257.35	181.00	120.07	78.61	59.57	217.59	291.06	158.66	325.89	31.52	271.69	79.11	121.39	300.12	62.57	257.09	74.71	197.27	159.12	148.83	45.13	106.49	199.67
6	Ix	Intron	0	6.51	9.78	4.06	0.00	0.00	0.83	4.90	2.24	9.90	14.03	2.89	5.62	0.00	4.41	14.53	10.54	17.22	28.27	5.82	5.76	3.46	3.28	1.10	3.92	6.07	8.59	2.22	5.94	3.26
7	Ix_SR1	SilentIntronRegion	0	6.67	10.01	4.16	0.00	0.00	0.85	5.01	2.29	10.13	14.37	2.96	5.76	0.00	4.51	14.82	10.74	17.62	28.92	5.96	5.90	3.55	3.36	1.12	4.01	6.22	8.80	2.28	6.06	3.34
8	Ix	Intron	0	24.67	23.37	21.51	17.80	11.02	46.54	5.00	1.25	41.37	42.35	11.55	13.91	2.78	27.05	50.41	39.77	123.97	59.05	23.79	9.78	21.89	7.32	5.71	35.44	21.29	10.64	7.03	9.20	13.73
9	Ix_SR1	SilentIntronRegion	0	6.14	4.49	4.23	7.07	0.00	8.11	0.00	0.00	7.71	9.58	1.31	1.73	0.82	8.74	8.96	11.89	23.74	15.56	34.70	1.97	7.27	0.00	0.06	7.46	8.39	2.72	2.08	2.99	1.70
10	Ix_AR1	ActiveIntronRegion	0	27.79	26.53	24.40	19.64	12.84	52.96	5.83	1.45	46.99	47.85	13.26	15.94	3.11	30.16	57.33	44.50	140.72	66.37	22.30	11.08	24.37	8.53	6.65	40.12	23.50	11.97	7.86	10.25	15.73
11	E2_Aa	NovelBoundary	0	32.80	64.96	12.06	8.63	0.00	109.08	10.07	7.46	75.31	71.34	20.18	25.93	3.38	41.19	111.62	99.37	210.35	121.75	40.46	15.80	56.07	14.05	11.28	58.50	45.61	11.67	3.78	3.68	15.91
12	ER2a	ExonRegion	0	1473.19	585.51	517.52	667.78	546.81	496.94	1074.71	1041.24	526.68	524.02	450.68	512.61	806.40	613.97	1204.86	437.72	626.22	350.38	896.45	1592.60	392.35	1804.78	318.83	866.23	1165.32	621.25	349.28	414.82	334.07
13	E2_Da	NovelBoundary	0	26.13	12.70	18.74	0.00	0.00	17.96	6.98	4.33	39.47	24.37	17.49	8.04	0.00	24.88	95.87	36.72	112.55	41.61	0.00	21.01	13.76	14.10	4.63	27.75	12.16	1.85	4.77	10.02	15.71
14	E2a_E3a	KnownJunction	0	1845.89	1135.87	389.74	418.23	389.50	876.24	2551.15	1210.60	836.99	1254.53	1194.11	1144.29	1371.15	906.18	2673.47	1106.40	1253.70	634.70	2305.90	2150.34	808.91	1884.65	864.97	1066.51	2413.21	1263.01	763.35	963.65	645.98
15	E2a_E4a	NovelJunction	1	47.78	8.92	0.00	0.00	0.00	13.77	83.82	13.19	38.86	48.21	18.85	23.73	33.82	25.95	73.95	2.91	21.29	13.87	161.85	61.11	19.81	39.23	24.28	14.42	36.26	18.93	22.31	6.69	15.45
16	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	2.05
17	Ix	Intron	0	30.55	13.85	19.68	33.75	4.04	36.67	9.23	8.83	23.73	42.23	8.14	12.35	4.63	26.06	33.19	41.57	63.64	70.48	22.70	12.69	24.31	13.44	9.54	18.00	18.88	14.59	6.15	8.88	9.89
18	Ix_AR4	ActiveIntronRegion	0	27.92	17.05	12.74	15.23	8.30	23.67	3.33	10.80	24.90	29.01	7.59	8.27	2.20	18.57	42.05	30.01	43.13	52.56	14.63	7.78	15.62	19.76	6.00	24.83	19.47	11.55	2.29	6.07	9.64
19	Ix_SR2	SilentIntronRegion	0	10.54	4.06	7.54	26.12	1.18	17.10	4.35	0.68	9.11	22.56	2.64	6.21	1.40	11.19	10.55	20.04	24.45	46.13	20.60	7.88	16.09	2.48	3.82	6.74	7.58	4.72	3.01	3.49	4.17
20	Ix_AR3	ActiveIntronRegion	0	35.21	12.61	19.56	52.91	4.75	38.74	9.28	11.51	25.12	49.77	7.98	14.77	5.58	26.67	45.06	41.33	80.55	74.22	20.63	12.41	30.28	11.30	9.93	18.88	19.35	17.08	3.98	13.01	15.07
21	Ix_SR1	SilentIntronRegion	0	40.25	19.69	28.73	31.99	4.27	50.85	13.53	11.46	31.43	52.72	11.50	15.51	6.52	36.57	36.61	57.73	81.86	86.29	27.46	17.06	27.92	19.46	13.69	22.34	25.13	19.16	10.60	10.24	10.08
22	E3_Aa	NovelBoundary	0	35.69	13.28	26.78	19.84	7.37	37.33	10.47	10.35	42.27	41.10	9.08	31.42	8.31	32.64	7.57	56.23	75.68	113.28	32.37	18.03	35.62	16.43	18.57	28.71	35.84	26.44	11.68	21.43	11.46
23	Ix_AR1	ActiveIntronRegion	0	8.66	3.92	8.67	1.97	0.00	8.88	6.12	0.00	6.40	18.77	5.81	5.80	2.35	9.70	11.42	17.52	14.18	64.66	20.71	7.24	10.53	7.70	2.36	8.03	8.41	13.66	0.00	1.50	2.58
24	ER3a	ExonRegion	0	1554.78	750.13	263.91	396.71	247.83	713.95	2753.69	1226.23	687.07	1244.94	1658.35	1698.80	1683.10	927.44	2527.98	908.58	1683.86	633.75	1618.95	1664.12	550.10	1574.44	1273.56	842.56	1932.23	2012.98	1282.47	1409.63	985.22
25	E3_Da	NovelBoundary	0	31.97	4.85	51.50	29.77	7.22	38.44	7.21	4.58	25.12	44.42	18.32	16.29	4.84	45.71	29.50	34.42	98.75	110.06	24.05	11.16	17.01	8.36	21.03	11.31	11.02	27.85	0.00	19.19	15.32
26	E3a_E4a	KnownJunction	0	1356.49	632.12	175.38	445.40	224.74	592.93	3468.30	967.60	671.14	1127.66	1703.93	1880.54	1567.25	866.10	2834.72	824.43	1782.24	618.26	1844.86	1329.14	425.09	1456.33	1449.37	694.88	1494.19	2087.04	1718.09	1679.67	1079.48
27	Ix	Intron	0	39.99	12.43	20.50	39.49	4.34	45.68	11.46	8.51	36.05	47.98	10.36	16.33	12.30	32.09	31.65	46.58	72.41	83.93	25.55	7.29	36.49	18.58	14.46	34.02	30.99	17.60	11.72	17.38	7.85
28	Ix_SR1	SilentIntronRegion	0	44.43	11.10	25.83	47.06	5.85	46.67	13.28	11.00	38.42	49.65	11.71	16.38	14.72	35.28	34.64	42.88	80.96	95.09	25.32	6.99	39.64	20.51	17.98	33.87	34.74	16.97	16.72	15.06	9.72
29	Ix_AR1	ActiveIntronRegion	0	31.25	15.59	9.41	23.97	1.16	44.46	7.77	3.29	31.70	45.38	7.64	16.55	7.35	25.87	25.89	55.51	55.47	61.62	26.60	8.09	30.46	14.78	7.13	35.06	23.52	19.35	1.14	22.78	3.98
30	E4_Aa	NovelBoundary	0	34.15	20.17	19.11	9.71	0.00	77.31	9.61	5.08	50.28	57.16	13.82	13.19	9.71	32.57	44.05	42.00	86.95	82.97	40.24	10.34	71.28	10.60	8.91	23.15	38.72	15.23	21.97	7.77	5.35
31	ER4a	ExonRegion	0	2349.96	1473.34	776.49	709.73	810.79	1074.92	2924.26	1765.05	1268.43	1127.16	1309.25	1620.30	1663.10	1066.08	3259.14	831.30	1649.65	868.68	2541.67	2256.81	945.96	2453.33	1223.15	1058.84	2156.70	2002.58	1602.39	1507.64	1052.26
32	E4_Da	NovelBoundary	0	40.52	16.38	13.11	37.96	0.00	30.69	15.51	4.78	24.67	89.76	7.59	18.46	8.22	19.96	62.19	48.27	118.38	51.63	24.28	0.00	34.94	9.72	22.85	36.97	9.58	14.29	0.00	8.49	20.04
33	E4a_E5a	KnownJunction	0	3133.60	1562.16	1558.93	1379.57	1441.15	947.91	2245.11	2106.34	1712.83	930.69	708.77	1027.69	1350.46	1122.90	3924.60	692.85	1108.47	808.21	2450.44	3164.65	704.06	3685.39	745.39	1427.98	2253.90	1492.90	1122.27	1124.28	712.43
34	Ix	Intron	0	21.66	9.30	9.25	22.42	2.35	17.53	3.39	4.43	12.28	21.19	5.73	2.67	2.80	12.84	30.49	25.43	23.70	45.96	13.07	11.27	11.67	8.67	6.96	11.38	9.28	5.67	1.32	6.27	3.71
35	Ix_SR1	SilentIntronRegion	0	29.02	5.81	12.07	29.12	0.00	20.47	4.55	3.32	13.93	26.06	8.06	3.34	2.92	12.66	38.96	30.41	35.03	51.01	14.42	16.17	14.16	12.20	6.53	16.50	13.55	6.38	2.48	9.56	4.24
36	Ix_AR1	ActiveIntronRegion	0	13.50	13.55	6.14	15.08	5.14	14.47	2.12	5.81	10.61	15.94	3.13	1.95	2.72	13.32	21.25	20.12	10.98	41.02	11.76	5.80	9.00	4.74	7.61	5.66	4.51	4.96	0.00	2.57	3.17
37	E5_Aa	NovelBoundary	0	13.21	47.12	41.63	8.63	13.26	42.82	13.62	5.08	24.70	56.20	13.35	17.14	17.00	30.04	17.14	39.47	95.12	127.92	80.92	13.98	32.45	26.40	23.10	16.45	36.79	39.82	7.45	27.95	17.40
38	ER5a	ExonRegion	0	913.91	466.24	579.11	1016.72	799.13	378.81	935.47	646.69	634.00	507.77	488.70	437.32	612.01	475.77	983.50	330.98	441.02	270.11	635.64	910.63	389.21	1072.28	386.42	591.90	889.86	679.23	480.16	462.54	293.52