Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C17orf80	Gene	0	103.70	67.25	49.80	221.47	58.15	100.16	115.88	106.29	52.11	84.84	117.05	105.34	61.67	107.58	133.60	80.59	106.63	96.33	184.00	108.65	120.00	58.08	81.02	81.71	79.36	43.67	100.46	105.33	62.48
2	426147	Transcript	0	2.49	5.90	0.24	4.13	1.41	4.59	3.50	2.15	8.81	2.29	5.74	2.67	0.21	2.68	2.88	2.04	4.74	8.34	13.35	1.48	6.84	1.92	1.32	1.87	1.60	1.36	1.06	2.59	0.30
3	359042	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	268942	Transcript	0	16.57	28.12	24.99	44.43	28.30	16.65	24.37	49.62	10.41	6.03	7.24	28.67	9.14	22.44	64.58	29.22	28.34	36.86	24.28	66.82	15.00	2.38	20.39	19.44	11.82	22.36	0.00	10.60	14.06
5	ER1a	ExonRegion	0	29.43	6.85	16.89	141.11	36.59	37.66	65.50	36.71	14.88	31.53	36.28	32.27	14.69	21.00	10.92	44.08	25.86	42.66	53.81	18.63	49.10	22.43	30.52	4.97	15.67	30.97	34.51	104.91	36.57
6	E1a_E2a	KnownJunction	1	93.37	19.78	55.83	406.80	99.48	113.49	118.21	86.44	44.22	128.86	140.27	115.21	33.63	83.40	60.19	131.96	103.34	131.77	169.49	62.60	122.66	85.27	98.60	23.81	56.75	79.43	137.36	341.25	129.25
7	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	36.82	0.00	0.00	0.00
8	E2_Aa	NovelBoundary	0	5.96	0.00	2.09	9.49	0.00	11.51	5.84	0.00	1.67	0.00	0.00	3.34	0.00	3.90	0.00	0.00	5.63	0.00	8.09	8.27	0.00	2.48	2.07	0.00	0.00	0.00	2.53	6.47	1.25
9	ER2a	ExonRegion	1	56.20	21.57	43.31	228.21	49.86	69.52	44.42	68.87	18.60	76.72	88.55	76.94	36.97	65.31	26.68	63.36	86.87	56.46	69.60	44.79	62.14	46.68	46.64	22.75	47.72	41.50	87.86	150.70	106.70
10	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.66	0.00	0.00	0.00	0.00	0.00	0.00	3.52	1.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	89.78	31.99	9.04	59.32	0.00	51.76	53.04	77.83	22.26	38.07	47.77	27.47	13.72	62.97	40.86	41.39	32.93	32.36	80.92	76.58	87.16	44.97	21.13	32.78	31.98	11.93	16.15	33.83	26.21
12	E2a_E4a	NovelJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	2.24	1.19	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	5.07	0.00	0.00
13	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	1.84	1.42	0.00	0.00	1.13	0.00	0.00	2.23	0.00	0.00	0.00	3.53	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	126.28	64.00	60.49	248.38	58.87	139.96	130.89	102.76	37.09	108.53	169.22	107.84	55.48	130.36	93.54	89.89	115.45	117.82	195.75	131.08	162.84	61.77	93.21	71.59	96.06	48.12	120.42	119.72	62.18
15	E3_Da	NovelBoundary	0	5.84	0.00	0.00	0.00	0.00	7.14	0.00	0.00	0.00	1.92	6.07	7.11	1.31	0.00	9.57	0.00	4.57	0.00	15.96	7.86	0.00	0.00	0.00	2.87	0.00	0.00	8.55	0.00	1.62
16	E3a_E4a	KnownJunction	0	68.54	39.17	48.63	137.18	27.56	54.64	63.22	81.37	14.95	52.93	67.41	91.32	34.90	55.72	121.58	59.29	56.41	46.49	80.92	48.46	66.30	50.03	76.14	55.69	56.64	31.41	73.45	67.58	31.46
17	E3a_E5a	KnownJunction	0	16.57	28.12	24.99	44.43	28.30	16.65	24.37	49.62	10.41	6.03	7.24	28.67	9.14	22.44	64.58	29.22	28.34	36.86	24.28	66.82	15.00	2.38	20.39	19.44	11.82	22.36	0.00	10.60	14.06
18	I3	Intron	0	3.66	2.73	0.83	2.08	0.55	4.20	1.33	1.19	2.21	2.90	1.46	2.91	1.70	2.18	5.08	2.00	4.20	4.31	7.35	1.16	3.08	0.29	1.02	1.45	1.24	0.83	1.41	1.60	0.86
19	I3_SR1	SilentIntronRegion	0	3.67	4.27	1.36	4.52	1.76	6.94	1.45	1.33	3.13	3.64	2.25	5.56	3.21	2.81	7.63	3.23	3.50	8.07	9.79	1.92	3.47	0.81	3.58	1.74	1.55	1.27	1.32	3.23	0.84
20	I3_AR1	ActiveIntronRegion	0	5.51	4.05	0.91	3.91	1.14	6.21	1.88	3.15	3.23	3.71	3.43	5.81	3.48	4.15	8.74	4.28	6.74	4.55	8.71	1.60	3.44	0.56	1.27	2.85	1.89	1.96	4.42	1.78	1.61
21	I3_SR2	SilentIntronRegion	0	3.29	1.33	0.40	0.42	0.00	2.02	1.19	0.54	2.07	2.55	0.84	1.32	0.42	1.45	3.09	1.44	2.87	3.34	7.69	0.65	2.45	0.00	0.17	0.93	0.76	0.46	0.98	1.74	0.47
22	I3_AR2	ActiveIntronRegion	0	1.40	3.64	0.81	0.00	0.00	2.27	0.98	0.30	2.05	3.76	0.77	0.36	0.84	2.19	4.18	0.02	5.19	3.90	6.34	2.22	3.45	0.00	0.41	0.93	1.85	0.51	0.00	1.58	1.75
23	I3_AR3	ActiveIntronRegion	0	3.24	3.72	1.16	4.96	0.00	4.29	0.47	0.00	1.40	2.08	0.55	0.91	1.30	0.42	3.70	0.57	2.41	3.21	9.05	0.64	4.85	0.00	0.42	0.79	0.66	0.00	0.00	0.38	0.31
24	I3_AR4	ActiveIntronRegion	0	4.67	0.39	0.84	0.00	0.00	3.69	2.03	0.62	0.85	2.18	0.00	1.97	0.98	1.29	2.47	0.72	6.26	2.59	1.61	0.46	2.15	0.30	0.00	1.08	1.43	0.26	0.00	0.00	0.00
25	E4_Aa	NovelBoundary	0	6.02	4.85	1.49	0.00	0.00	1.65	0.00	0.00	0.00	2.00	0.00	1.60	0.00	1.24	8.37	6.58	7.07	4.62	0.00	3.31	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER4a	ExonRegion	0	103.01	54.02	48.53	177.54	31.60	79.48	94.11	125.48	30.54	65.81	78.21	76.70	57.07	65.98	96.97	49.30	53.72	65.90	97.98	72.95	100.11	74.80	82.41	40.15	56.33	42.24	55.39	106.45	30.09
27	E4_Da	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.84	0.00	0.00	0.00	1.40	1.13	7.57	0.00	3.29	0.00	8.09	0.00	0.00	0.00	2.31	2.99	1.93	0.00	0.00	2.25	0.00
28	E4a_E5a	KnownJunction	0	89.72	41.79	56.21	124.45	33.01	69.71	89.43	101.27	25.85	54.33	40.24	57.20	37.35	46.15	39.27	36.64	34.53	46.23	97.11	63.10	77.45	56.06	51.02	20.52	39.74	13.30	37.67	82.58	14.96
29	I4	Intron	0	2.41	3.02	0.47	1.34	0.00	5.67	2.46	1.03	2.62	2.84	0.55	1.10	0.91	0.59	0.42	2.56	3.77	3.37	3.89	1.80	2.81	0.00	0.34	0.61	0.27	0.88	0.00	2.90	0.13
30	I4_AR1	ActiveIntronRegion	0	3.50	6.48	0.59	0.00	0.00	7.18	1.35	2.47	1.21	4.18	0.00	0.59	0.82	0.41	0.00	3.03	2.66	3.48	4.29	3.44	2.68	0.00	0.00	2.21	0.00	1.05	0.00	0.94	0.00
31	I4_SR1	SilentIntronRegion	0	2.24	2.47	0.45	1.57	0.00	5.45	2.65	0.80	2.86	2.64	0.65	1.18	0.93	0.62	0.49	2.49	3.97	3.36	3.85	1.54	2.84	0.00	0.40	0.35	0.31	0.85	0.00	3.23	0.15
32	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.39	0.00	2.04	0.00	1.14	0.00	2.99	0.00	0.00	0.83	0.00	15.96	4.13	3.37	0.00	2.36	0.00	0.00	0.00	0.00	0.00	0.00
33	ER5a	ExonRegion	0	109.60	62.26	85.89	238.95	66.79	71.90	95.58	175.81	29.11	61.60	81.30	120.05	64.78	107.59	130.06	65.05	99.16	99.36	130.41	97.72	94.01	83.18	95.10	56.53	71.48	52.01	76.84	142.99	56.30
34	E5_Da	NovelBoundary	0	2.95	7.37	1.22	10.14	0.00	3.15	0.00	0.00	7.16	5.91	5.82	2.74	0.00	1.91	0.00	0.00	8.31	0.00	0.00	4.13	2.05	0.00	0.00	2.45	0.00	1.97	0.00	0.00	2.71
35	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.76	2.75	0.00	10.08	0.00	4.02	0.00	0.00	0.00	0.00	0.00	0.00	9.12	0.00	0.00	4.09	2.48	0.00	0.00	1.48	0.00	0.00	0.00	0.00
36	E5a_E7a	KnownJunction	0	148.11	47.70	94.70	207.06	53.20	99.07	117.75	204.14	35.08	75.14	85.41	98.28	74.64	101.63	114.41	49.72	108.45	126.12	137.35	123.47	102.88	76.43	106.67	65.68	69.78	64.76	134.73	146.21	85.64
37	I5	Intron	0	4.92	5.13	0.75	5.29	1.60	3.89	2.23	1.43	3.38	3.43	2.10	3.23	0.66	3.99	5.02	3.24	8.63	6.06	8.25	2.89	5.15	0.22	0.30	1.41	1.99	0.90	0.23	3.34	0.71
38	I5_SR1	SilentIntronRegion	0	3.43	3.76	0.41	4.34	1.48	3.29	1.01	0.62	3.22	2.47	1.34	1.44	0.74	2.74	2.53	2.19	6.90	4.12	7.15	1.88	4.96	0.00	0.27	0.87	1.61	0.86	0.00	2.71	0.61
39	I5_AR1	ActiveIntronRegion	0	8.88	0.42	1.50	6.96	0.00	1.66	2.85	1.40	2.76	4.26	2.23	3.67	0.80	6.13	15.29	2.21	7.33	7.58	2.73	0.85	4.71	0.00	0.80	1.06	3.90	0.00	0.00	4.92	0.00
40	I5_AR2	ActiveIntronRegion	0	7.93	9.50	1.49	7.36	2.22	5.84	5.20	3.50	3.91	5.72	3.98	7.66	0.43	6.72	9.38	6.09	13.26	10.67	12.12	5.84	5.74	0.82	0.27	2.84	2.60	1.19	0.83	4.64	1.12
41	E6_Aa	NovelBoundary	0	3.01	4.65	2.77	9.27	0.00	3.61	2.92	4.38	3.14	3.56	4.84	8.46	0.00	3.19	7.97	10.94	18.35	4.62	0.00	0.00	6.14	2.48	0.00	2.39	3.83	0.00	0.00	0.00	0.00
42	ER6a	ExonRegion	0	4.98	11.80	0.49	8.26	2.81	7.41	4.26	4.31	7.55	4.58	7.46	5.34	0.42	5.35	5.76	4.09	9.47	7.56	26.69	2.95	9.58	1.35	2.64	3.73	1.72	2.72	2.11	5.18	0.60
43	E6_Da	NovelBoundary	0	7.79	0.00	1.20	10.57	0.00	5.18	0.00	0.00	1.49	1.76	1.61	5.81	0.00	6.49	8.97	10.33	13.33	9.25	24.28	0.00	16.57	0.00	0.00	0.00	3.56	0.00	0.00	1.66	0.00
44	I6	Intron	0	9.50	6.30	2.92	5.73	3.55	7.39	4.83	4.08	7.64	8.29	4.24	6.05	1.22	9.25	12.02	11.39	19.14	8.55	15.43	6.07	6.22	0.72	0.92	5.16	4.99	1.88	1.60	5.92	2.74
45	I6_AR1	ActiveIntronRegion	0	6.36	8.30	1.50	5.50	3.01	8.44	5.60	3.90	5.57	8.25	6.10	4.14	0.93	8.34	16.34	8.36	17.03	8.00	17.74	4.29	6.86	0.33	0.99	4.87	3.64	1.81	0.46	3.15	2.55
46	I6_SR1	SilentIntronRegion	0	21.43	0.00	2.24	0.00	4.98	12.37	6.05	1.84	3.75	12.99	3.57	3.71	1.30	9.98	0.00	6.75	12.19	7.73	27.15	2.81	11.41	1.80	4.22	4.66	0.71	0.00	0.00	3.26	5.37
47	I6_AR2	ActiveIntronRegion	0	8.42	5.81	2.86	5.12	3.01	7.55	4.08	3.24	8.19	9.30	4.79	7.45	1.42	9.67	7.96	10.59	21.24	9.52	16.12	7.55	5.58	0.45	1.00	3.73	5.53	1.60	0.37	7.41	1.84
48	I6_AR3	ActiveIntronRegion	0	12.98	5.29	4.12	6.62	4.51	6.35	4.96	5.10	8.80	7.26	2.20	6.20	1.26	9.55	12.82	14.71	18.84	8.04	12.79	6.06	6.29	1.29	0.74	6.84	5.57	2.26	3.76	6.69	3.77
49	E7_Aa	NovelBoundary	0	22.59	4.27	1.32	0.00	0.00	5.33	7.50	11.60	21.80	11.38	7.97	3.31	3.25	11.52	16.74	11.09	10.42	13.87	8.09	0.00	7.34	0.00	0.00	0.00	1.48	4.25	0.00	1.93	4.09
50	ER7a	ExonRegion	0	99.98	82.71	45.17	224.68	65.90	82.35	123.56	119.98	76.70	77.80	92.34	119.55	77.35	107.27	197.34	85.98	117.69	93.16	211.89	110.81	103.20	60.41	81.84	110.24	79.48	44.26	101.15	97.68	70.05