Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LCAT	Gene	0	30.42	13.62	12.38	13.76	6.60	15.64	4.25	3.68	18.20	12.41	4.70	10.29	4.92	19.30	36.97	38.64	49.75	100.47	20.03	9.71	27.80	8.23	16.23	48.96	23.26	14.49	9.90	14.41	29.01
2	264005	Transcript	0	31.35	12.69	13.56	19.98	3.63	14.05	5.58	4.54	21.61	10.33	5.15	9.59	5.09	16.43	30.14	46.58	44.54	97.69	17.32	8.24	29.17	8.51	18.23	47.78	23.38	11.94	10.70	13.54	27.19
3	ER1a	ExonRegion	0	27.32	14.40	12.48	15.56	6.62	16.63	4.01	3.16	10.35	10.38	4.94	5.68	3.84	16.13	22.66	28.51	43.37	118.36	14.16	9.80	28.40	4.24	12.70	40.32	16.94	10.37	8.45	6.78	24.29
4	E1_Da	NovelBoundary	0	28.02	20.07	12.83	0.00	6.78	15.50	5.03	0.00	13.06	8.55	5.60	6.78	5.06	8.75	78.33	12.39	37.55	126.89	8.09	7.11	26.67	6.90	2.02	28.41	8.22	16.26	14.66	7.46	17.10
5	E1a_E2a	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	1.73	0.00	0.00	6.49	3.52	0.00	0.00	1.40	0.86	0.00	3.82	2.16	18.49	0.00	0.00	5.90	0.00	6.50	2.81	1.74	0.00	0.00	0.00	1.39
6	I1	Intron	0	18.44	5.56	7.78	4.48	7.08	11.45	3.64	2.17	9.42	6.31	2.06	5.90	2.74	9.07	24.44	19.98	26.41	79.20	9.31	4.62	21.68	5.50	10.54	32.69	13.49	11.45	4.32	10.74	13.56
7	I1_AR1	ActiveIntronRegion	0	18.49	5.57	7.79	4.49	7.10	11.48	3.65	2.18	9.44	6.33	2.07	5.92	2.75	9.10	24.49	20.04	26.48	79.42	9.34	4.63	21.73	5.52	10.57	32.78	13.53	11.48	4.33	10.77	13.60
8	E2_Aa	NovelBoundary	0	21.88	4.56	11.61	0.00	0.00	20.10	2.29	2.19	18.06	20.49	13.32	20.45	12.77	26.74	41.26	28.46	67.15	102.49	0.00	6.62	27.28	10.26	17.93	43.84	28.22	25.28	24.50	7.55	20.44
9	ER2a	ExonRegion	0	32.17	10.86	8.98	8.06	6.35	17.49	7.22	3.60	27.71	15.03	4.79	9.76	5.79	23.05	28.43	50.10	41.59	104.91	26.23	7.16	35.30	10.22	13.48	62.45	34.14	16.42	13.47	13.78	25.77
10	E2_Da	NovelBoundary	0	8.49	0.00	2.72	0.00	0.00	6.91	0.00	8.41	8.86	1.80	1.55	2.89	2.71	9.75	0.00	3.75	21.54	0.00	0.00	0.00	5.09	2.48	0.00	2.93	3.41	19.78	0.00	14.24	3.30
11	E2a_E3a	KnownJunction	0	41.35	4.27	8.77	10.78	0.00	12.32	8.01	11.50	43.64	7.67	13.07	13.34	13.44	19.34	15.95	65.87	54.38	163.49	0.00	0.00	48.13	6.17	21.03	94.15	34.17	7.51	7.06	21.39	32.91
12	I2	Intron	0	0.00	0.00	0.00	9.26	0.00	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.84	1.17	8.93	0.00	0.96	2.49	0.00	1.78	4.60	0.00	1.17	1.39	0.92	5.07	0.00	1.05	0.00
13	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	9.50	0.00	0.00	0.00	0.00	0.00	2.87	0.00	0.00	0.86	1.20	9.16	0.00	0.98	2.52	0.00	1.79	4.72	0.00	1.20	1.42	0.95	5.20	0.00	1.08	0.00
14	E3_Aa	NovelBoundary	0	8.20	0.00	1.54	8.84	0.00	0.00	0.00	0.00	0.00	3.60	0.00	1.30	0.00	3.12	9.77	3.21	15.46	4.62	0.00	0.00	1.85	0.00	0.00	2.33	1.93	0.00	0.00	10.56	0.00
15	ER3a	ExonRegion	0	42.09	8.78	16.89	25.09	4.29	15.25	6.93	6.70	27.68	14.76	11.11	16.66	9.59	19.79	29.55	55.07	62.33	125.52	21.93	8.04	36.46	12.95	19.92	53.98	28.33	18.83	10.89	18.59	30.72
16	E3_Da	NovelBoundary	0	0.00	4.36	3.96	0.00	0.00	0.00	0.00	0.00	3.53	3.91	0.00	1.23	1.21	4.23	7.77	2.91	11.10	0.00	0.00	0.00	3.65	0.00	0.00	0.00	5.11	5.45	0.00	4.22	2.51
17	E3a_E4a	KnownJunction	0	37.57	28.79	25.64	92.32	0.00	19.26	2.29	2.29	41.87	10.87	6.23	6.23	4.74	18.48	33.69	82.62	46.86	85.79	16.18	8.27	38.02	9.24	19.75	46.66	28.15	15.58	16.60	0.00	29.32
18	I3	Intron	0	0.00	0.00	0.00	0.00	0.00	1.49	0.00	0.00	1.22	0.78	0.65	0.00	0.00	0.98	5.00	3.66	6.48	3.14	1.73	0.00	2.32	0.98	0.98	3.50	1.55	0.85	0.99	1.77	0.73
19	I3_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	1.25	0.80	0.66	0.00	0.00	1.01	5.11	3.74	6.61	3.20	1.77	0.00	2.37	1.00	1.00	3.58	1.58	0.87	1.00	1.81	0.74
20	E4_Aa	NovelBoundary	0	3.01	0.00	1.54	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	1.42	1.24	5.47	8.77	0.00	11.16	9.25	0.00	0.00	0.00	0.00	2.51	5.62	0.00	2.19	2.48	4.13	1.42
21	ER4a	ExonRegion	0	32.80	13.65	22.00	29.17	2.28	11.33	7.16	3.78	21.02	14.21	3.91	13.39	2.96	18.32	34.48	50.90	33.45	110.73	32.44	12.30	36.22	7.64	21.08	51.45	28.88	6.60	18.43	19.22	24.54
22	E4_Da	NovelBoundary	0	2.24	0.00	2.92	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	1.54	0.00	1.97	0.00	6.58	9.50	0.00	0.00	0.00	4.01	2.09	0.00	3.05	1.93	4.08	2.34	1.98	0.00
23	E4a_E5a	KnownJunction	0	16.34	0.00	14.25	0.00	6.04	15.04	5.26	1.94	7.22	5.23	2.91	1.54	1.27	7.73	52.22	47.66	31.78	69.48	0.00	19.35	13.32	12.45	16.15	14.00	15.34	5.62	14.06	11.55	15.65
24	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I4	Intron	0	5.27	0.00	0.00	0.00	3.00	0.84	0.00	0.00	0.69	0.89	0.00	0.76	0.00	1.11	9.04	1.10	1.83	2.37	0.00	1.69	3.51	1.11	1.11	0.00	0.00	0.00	1.13	3.00	0.82
26	I4_AR1	ActiveIntronRegion	0	5.40	0.00	0.00	0.00	3.08	0.87	0.00	0.00	0.71	0.91	0.00	0.78	0.00	1.14	9.27	1.12	1.88	2.43	0.00	1.73	3.59	1.14	1.14	0.00	0.00	0.00	1.15	3.08	0.85
27	E5_Aa	NovelBoundary	0	2.95	0.00	1.37	0.00	0.00	3.26	5.03	0.00	3.20	5.55	0.00	1.33	1.94	3.37	9.57	14.23	15.82	9.25	0.00	3.14	0.00	2.48	2.02	2.39	11.29	8.20	0.00	11.37	1.88
28	ER5a	ExonRegion	0	46.78	11.61	19.16	20.28	6.77	20.85	8.78	3.53	22.73	14.03	6.81	16.41	4.53	27.51	48.91	63.58	63.14	124.51	28.56	12.19	37.59	11.22	30.23	61.88	33.05	16.21	15.07	18.45	44.51
29	E5_Da	NovelBoundary	0	10.03	0.00	0.00	18.12	0.00	0.00	8.75	0.00	1.46	11.86	1.42	4.49	0.00	7.27	8.37	7.65	29.49	27.61	0.00	0.00	5.25	2.29	4.83	21.59	10.68	17.55	2.44	31.05	4.39
30	E5a_E6a	KnownJunction	0	43.18	32.19	10.44	10.78	0.00	11.16	10.18	9.75	10.02	5.63	0.00	11.78	3.25	11.10	17.94	32.13	58.43	80.40	32.37	4.13	21.38	10.16	25.66	50.30	15.19	17.08	6.26	21.25	41.13
31	I5	Intron	0	8.96	3.52	1.93	5.52	1.34	6.50	1.33	2.03	5.68	4.85	1.77	4.71	1.89	7.64	16.67	9.47	24.56	28.17	6.15	3.77	8.63	2.88	3.08	12.66	7.71	7.01	3.33	8.07	5.45
32	I5_AR1	ActiveIntronRegion	0	10.25	3.71	2.28	7.07	1.48	7.30	1.84	2.24	7.06	6.25	1.99	5.94	1.72	8.31	14.08	10.58	24.81	30.41	6.55	3.32	9.74	2.60	3.02	13.71	7.38	5.97	3.06	7.92	5.53
33	I5_AR2	ActiveIntronRegion	0	5.97	3.26	1.07	1.54	1.05	4.71	0.00	1.57	2.17	1.24	1.28	1.59	2.50	6.30	25.18	7.00	25.61	23.87	5.48	5.31	6.11	3.86	3.49	10.60	9.19	10.44	4.32	9.08	5.58
34	E6_Aa	NovelBoundary	0	10.38	0.00	8.00	0.00	0.00	1.57	0.00	0.00	8.25	3.67	1.58	5.30	1.46	9.55	17.34	0.00	35.99	9.25	0.00	0.00	13.60	6.76	4.53	25.84	11.82	4.38	0.00	15.82	7.73
35	ER6a	ExonRegion	0	25.21	15.00	8.96	7.74	7.52	13.51	1.59	3.66	18.94	12.30	2.91	10.67	5.20	18.45	47.69	32.07	52.45	72.92	18.67	9.35	20.20	9.31	14.00	47.61	21.23	17.07	7.38	17.89	28.89
36	IG15	Intergenic	0	7.28	4.02	0.77	3.32	0.75	4.24	0.47	1.70	6.01	4.79	0.92	2.47	3.80	10.30	21.94	5.88	29.60	5.05	3.94	4.29	4.40	0.56	2.65	5.64	6.29	11.16	9.04	9.94	6.56
37	IG15_AR3	ActiveIntergenicRegion	0	1.35	1.41	0.00	0.00	0.00	2.67	0.00	0.81	1.48	1.26	0.26	0.67	2.41	3.47	19.23	3.23	11.73	2.18	1.40	1.21	1.25	0.39	0.79	2.73	1.56	5.49	7.22	2.14	1.61
38	IG15_AR1	ActiveIntergenicRegion	0	14.37	7.45	1.64	7.03	1.60	6.97	0.99	3.01	11.64	9.20	1.75	4.74	6.25	19.24	32.06	10.03	53.92	9.08	6.27	8.18	8.39	0.88	5.02	9.85	12.15	19.52	13.77	19.45	12.68