Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	POLR2C	Gene	0	385.41	223.73	195.48	261.47	228.01	222.13	444.60	309.76	257.67	300.34	240.22	324.43	325.33	283.93	275.53	235.66	355.93	228.19	328.55	479.69	139.17	364.19	361.40	329.13	337.49	254.96	240.77	345.47	221.79
2	219252	Transcript	0	424.95	219.80	174.84	259.95	211.56	230.30	481.08	330.98	215.42	322.79	243.72	372.49	327.48	327.68	271.70	256.66	381.63	260.85	333.46	560.68	135.29	383.71	396.15	306.48	346.11	286.26	224.48	393.18	228.37
3	IG16	Intergenic	0	1.64	3.68	0.82	0.79	0.54	4.59	0.66	1.61	1.01	2.14	0.52	2.16	1.67	2.75	2.12	5.87	5.72	2.67	2.63	0.75	1.25	0.59	0.40	2.59	2.51	0.69	1.61	1.96	0.66
4	IG16_AR1	ActiveIntergenicRegion	0	0.00	6.57	0.00	0.00	0.00	0.00	0.00	1.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG16_SR1	SilentIntergenicRegion	0	1.66	3.66	0.83	0.79	0.54	4.64	0.67	1.62	1.02	2.16	0.53	2.18	1.68	2.78	2.14	5.92	5.78	2.70	2.65	0.76	1.26	0.60	0.40	2.62	2.53	0.70	1.62	1.98	0.67
6	ER1a	ExonRegion	0	60.16	21.84	74.09	126.85	102.73	49.09	99.81	38.07	25.79	49.32	25.67	74.23	67.89	44.59	38.06	65.15	103.04	43.90	38.74	75.44	25.06	53.50	86.73	22.80	35.54	70.40	41.36	98.74	58.63
7	E1a_E2a	KnownJunction	1	58.57	45.37	7.87	51.12	0.00	19.68	87.60	27.17	29.51	9.07	18.57	85.48	67.54	64.70	91.29	28.23	64.40	42.77	64.07	90.64	7.54	114.25	24.08	50.19	17.39	8.02	0.00	20.13	49.59
8	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	8.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	7.77	0.00	0.00	0.00	0.00	0.00	3.97	0.00	0.00	0.00	1.44	4.21	0.00	2.29	1.55
9	ER2a	ExonRegion	0	317.11	110.31	16.99	34.22	21.62	127.43	161.46	168.72	106.78	154.22	97.61	146.89	170.66	209.42	119.07	134.89	167.75	136.13	129.62	468.26	75.63	360.58	103.32	153.46	141.33	89.39	18.72	88.02	127.80
10	E2_Da	NovelBoundary	0	8.97	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	1.61	0.00	0.00	0.00	0.00	3.52	1.19	0.00	0.00	0.00	3.97	2.48	0.00	2.81	0.00	0.00	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	588.08	217.07	38.84	68.59	41.71	356.32	362.40	341.19	255.31	349.56	171.14	240.33	288.45	336.16	216.66	345.24	317.04	276.77	242.77	1005.87	193.45	543.69	217.68	300.15	348.81	225.17	40.35	207.76	243.41
12	I2_AR3	ActiveIntronRegion	0	1.45	0.98	0.00	2.02	0.00	2.05	0.70	0.00	1.13	2.55	1.43	0.77	0.00	1.49	0.00	1.83	1.04	0.77	4.28	0.00	0.44	0.00	0.00	1.93	0.00	0.52	0.00	2.03	0.00
13	E3_Aa	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	3.45	0.00	0.00	5.76	0.00	0.00	4.55	0.00	0.97	0.00	0.00	1.40	9.25	0.00	0.00	0.00	4.47	0.00	2.87	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	487.94	255.08	46.67	116.90	77.97	452.29	858.39	374.81	283.58	578.74	318.74	494.97	497.82	406.84	344.48	510.07	557.45	379.35	398.86	822.06	212.92	393.44	559.77	342.97	510.09	548.45	190.03	584.43	404.32
15	E3a_E4a	KnownJunction	0	386.77	244.22	55.96	224.54	156.21	280.58	714.21	354.78	209.64	462.89	370.79	570.89	504.73	353.44	334.06	250.53	568.02	283.06	461.05	512.32	123.50	295.54	742.54	386.47	391.35	762.28	437.14	892.65	443.67
16	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
17	ER4a	ExonRegion	0	335.96	192.57	143.88	174.54	155.46	186.23	405.55	324.24	147.97	285.13	261.26	464.58	324.66	319.90	221.17	194.34	465.57	223.38	271.04	525.70	95.62	312.18	520.88	301.16	324.67	341.73	479.76	597.02	289.10
18	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00
19	E4a_E5a	KnownJunction	0	339.34	163.46	229.29	196.06	191.58	164.75	344.89	247.54	166.21	236.72	201.23	328.13	198.33	300.35	251.34	156.36	348.49	217.05	274.92	505.21	99.79	314.26	298.90	249.43	282.09	208.09	269.91	390.90	148.36
20	E5_Aa	NovelBoundary	0	5.84	4.65	0.00	0.00	6.78	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	5.58	4.62	8.09	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER5a	ExonRegion	0	470.22	213.04	394.06	493.01	518.00	216.28	433.64	334.61	191.57	322.99	242.51	329.34	299.57	398.02	283.29	245.99	385.54	288.11	335.96	620.29	125.81	420.49	337.44	333.98	377.99	254.10	160.59	326.69	188.69
22	E5_Da	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	3.43	0.00	0.00	12.52	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E5a_E6a	KnownJunction	0	477.25	340.39	163.59	444.97	376.98	207.18	497.02	378.22	188.23	320.00	277.21	362.40	333.89	368.15	331.87	268.20	326.09	359.86	403.95	508.60	145.28	418.35	387.00	355.90	407.23	231.26	155.16	316.72	166.69
24	I5	Intron	0	7.36	3.55	1.84	0.00	0.60	3.03	1.24	1.58	1.10	1.77	1.02	2.19	0.64	4.38	1.70	3.35	7.50	4.41	3.92	1.84	1.22	0.22	0.00	1.58	1.05	1.16	1.80	1.00	0.41
25	I5_AR1	ActiveIntronRegion	0	7.39	3.57	1.85	0.00	0.60	3.05	1.24	1.59	1.11	1.78	1.03	2.20	0.64	4.41	1.70	3.36	7.54	4.43	3.94	1.85	1.23	0.22	0.00	1.59	1.06	1.16	1.80	1.00	0.41
26	E6_Aa	NovelBoundary	0	23.30	0.00	3.64	0.00	0.00	3.91	6.81	2.14	1.19	0.00	1.33	3.13	0.00	4.59	8.37	3.82	9.61	0.00	16.18	4.13	6.14	2.04	4.43	3.05	0.00	3.43	0.00	6.11	0.00
27	ER6a	ExonRegion	0	502.81	265.64	227.91	457.46	346.79	229.73	489.01	401.50	218.20	356.92	285.10	444.26	357.00	390.08	297.37	281.35	401.13	317.48	412.89	617.48	146.84	444.83	464.38	346.46	418.68	273.55	228.06	398.23	201.30
28	E6_Da	NovelBoundary	0	8.85	0.00	0.00	0.00	6.04	1.96	0.00	4.88	0.00	1.48	3.23	0.00	1.31	2.26	0.00	0.00	4.70	10.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78
29	E6a_E7a	KnownJunction	0	477.72	203.79	241.90	403.34	324.95	221.07	571.35	384.34	249.10	349.40	258.61	456.35	320.45	366.16	307.75	282.82	435.64	265.47	331.57	610.49	118.17	381.84	497.91	346.33	370.21	279.07	234.17	447.47	205.28
30	I6_AR1	ActiveIntronRegion	0	5.24	0.00	1.44	0.00	0.00	2.61	0.00	2.01	0.35	0.53	0.04	1.57	0.00	1.39	2.12	4.66	3.75	4.07	3.56	4.56	1.04	0.66	0.00	2.75	0.52	0.00	0.00	2.97	0.00
31	I6_SR1	SilentIntronRegion	0	2.48	0.00	0.94	0.00	0.00	0.96	0.00	0.00	1.64	0.00	0.96	0.00	0.00	1.85	3.05	0.62	2.81	4.07	8.42	0.44	0.00	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00
32	E7_Aa	NovelBoundary	0	0.00	0.00	0.92	0.00	0.00	6.56	0.00	0.00	0.00	1.84	0.00	1.51	0.00	1.04	0.00	0.00	3.29	4.62	0.00	8.02	0.00	0.00	2.36	5.56	0.00	0.00	0.00	0.00	0.00
33	ER7a	ExonRegion	0	588.16	284.19	232.83	298.65	228.24	288.80	644.32	440.44	284.74	407.84	315.13	498.31	430.72	430.69	359.47	335.27	475.39	372.91	400.66	630.01	181.51	509.16	522.58	391.36	463.38	367.04	314.88	473.43	266.04
34	E7_Da	NovelBoundary	0	18.11	0.00	5.13	0.00	6.93	5.87	8.18	7.12	8.95	3.87	7.75	9.43	1.72	11.52	8.37	7.65	28.38	18.88	8.09	7.44	1.76	6.66	0.00	5.08	1.40	6.05	0.00	3.77	1.32
35	E7a_E8a	KnownJunction	0	539.66	295.02	246.56	304.56	287.67	268.61	566.25	493.03	345.12	368.62	324.06	469.78	458.43	402.56	413.99	353.50	483.75	278.57	525.79	625.29	180.54	483.94	493.04	397.06	469.13	296.15	282.43	468.32	315.44
36	I7	Intron	0	10.92	6.26	1.71	0.00	0.00	3.74	3.43	3.13	2.85	2.95	0.00	5.24	1.54	4.15	7.17	6.75	8.63	7.86	10.86	5.36	1.45	0.00	0.00	4.39	3.89	1.07	1.25	1.66	0.46
37	I7_AR1	ActiveIntronRegion	0	11.58	6.66	1.81	0.00	0.00	3.93	3.52	3.33	3.04	3.13	0.00	5.54	1.64	4.36	7.63	7.18	9.10	8.36	11.56	5.54	1.55	0.00	0.00	4.61	4.06	1.05	1.32	1.77	0.49
38	E8_Aa	NovelBoundary	0	22.77	17.94	8.37	0.00	18.57	3.88	7.72	12.94	15.84	6.63	3.54	14.94	4.55	11.61	33.69	12.93	42.05	4.62	0.00	12.07	0.00	4.67	0.00	13.22	6.18	1.93	0.00	2.07	1.49
39	I7_SR1	SilentIntronRegion	0	0.61	0.00	0.00	0.00	0.00	0.98	2.59	0.00	0.00	0.00	0.00	0.88	0.00	1.17	0.00	0.00	1.57	0.00	0.00	2.81	0.00	0.00	0.00	1.23	1.43	1.57	0.00	0.00	0.00
40	ER8a	ExonRegion	0	609.52	304.93	300.04	344.57	279.17	308.82	706.67	528.10	310.33	444.82	346.19	540.88	452.68	444.34	341.11	327.54	481.92	332.52	454.51	693.97	196.21	550.05	576.91	392.23	463.90	331.36	335.34	520.31	262.89
41	E8_Da	NovelBoundary	0	13.63	0.00	1.17	0.00	0.00	1.50	2.92	0.00	4.81	1.52	0.00	0.00	1.34	3.86	0.00	6.27	11.25	9.25	16.18	11.99	1.52	0.00	0.00	2.81	5.72	0.00	0.00	0.00	0.00
42	E8a_E9a	KnownJunction	0	533.11	284.84	325.49	388.89	230.34	271.03	714.44	411.96	284.34	432.45	323.24	459.30	392.42	414.84	309.94	316.09	491.56	362.04	493.42	663.83	195.54	482.82	480.48	392.87	441.17	290.40	312.40	457.00	238.56
43	I8	Intron	0	9.52	3.18	2.20	0.59	3.21	4.30	2.32	4.24	5.20	2.97	0.98	3.30	0.21	6.40	5.22	5.25	11.42	6.84	4.20	5.54	1.76	1.63	0.45	6.19	2.00	1.94	0.15	3.75	0.72
44	I8_SR1	SilentIntronRegion	0	9.58	3.20	2.21	0.59	3.23	4.32	2.34	4.27	5.23	2.99	0.99	3.32	0.22	6.44	5.26	5.28	11.49	6.88	4.23	5.58	1.77	1.64	0.45	6.23	2.01	1.95	0.15	3.78	0.72
45	E9_Aa	NovelBoundary	0	13.39	0.00	5.90	0.00	0.00	5.79	2.35	6.72	2.89	3.44	0.00	0.00	0.00	1.99	0.00	3.60	8.01	4.62	16.18	7.28	2.05	0.00	2.36	0.00	0.00	7.42	0.00	4.13	3.00
46	ER9a	ExonRegion	0	451.76	294.81	226.30	290.87	257.14	267.22	521.40	377.87	365.72	358.70	306.18	366.22	401.91	320.36	357.96	267.65	414.92	255.13	428.99	556.07	176.49	444.07	420.83	447.30	420.88	289.85	315.93	396.24	272.46