Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DNAJA2	Gene	0	303.13	200.31	145.29	303.26	204.22	200.55	233.97	162.01	143.70	171.91	238.07	211.95	219.34	171.70	164.51	156.66	158.76	131.68	328.80	221.99	160.10	159.78	257.18	151.90	202.33	127.49	280.66	138.67	130.38
2	317089	Transcript	0	749.56	481.30	282.28	662.09	420.76	461.56	550.56	388.27	353.19	404.32	538.01	465.24	505.01	406.48	420.65	384.68	352.08	321.53	826.00	543.08	379.54	397.73	583.39	355.70	484.54	285.13	604.23	307.20	283.77
3	IG33_AR8	ActiveIntergenicRegion	0	0.00	5.27	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.63	1.00	1.75	0.00	0.00	4.44	0.00	0.00	0.00	7.33	0.00	0.32	0.00	0.09	4.56	0.00	0.00	0.90	0.00	0.00
4	IG33_AR7	ActiveIntergenicRegion	0	0.58	2.80	0.40	0.86	0.29	3.10	0.61	0.61	2.75	1.43	3.29	3.02	1.66	0.42	3.19	0.75	0.63	0.29	4.18	0.00	2.54	0.00	0.98	9.23	0.68	1.04	8.93	1.23	0.40
5	IG33_AR2	ActiveIntergenicRegion	0	1.15	7.18	1.99	1.29	5.71	2.61	2.87	0.00	5.81	1.04	1.18	2.59	0.52	3.01	2.73	5.11	7.87	2.63	2.59	2.34	3.04	1.30	0.00	3.87	3.14	1.21	1.33	0.45	1.78
6	IG33_SR1	SilentIntergenicRegion	0	2.85	4.03	3.08	2.52	2.19	3.73	3.83	0.64	3.81	3.28	2.25	3.85	0.69	2.32	7.08	3.48	5.17	2.56	4.16	1.48	3.04	0.41	1.09	1.09	3.92	2.44	3.16	2.09	1.36
7	IG33_AR1	ActiveIntergenicRegion	0	3.14	0.00	1.18	3.81	2.80	0.00	0.11	0.00	1.25	0.00	0.28	0.15	0.00	0.06	3.84	5.23	2.13	0.00	0.50	1.16	0.00	1.04	1.93	0.80	1.37	2.63	0.03	1.14	0.90
8	ER1a	ExonRegion	0	224.55	63.37	153.58	354.43	315.31	81.26	110.77	95.68	56.11	73.92	68.10	125.31	152.05	84.48	94.12	126.32	98.28	130.78	146.45	154.98	75.48	141.56	207.85	53.38	86.65	105.11	91.33	113.47	114.74
9	E1_Da	NovelBoundary	0	21.88	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	1.72	0.00	0.00	0.00	2.91	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00
10	E1a_E2a	KnownJunction	0	554.58	96.37	46.32	121.22	91.08	108.31	135.89	179.56	66.93	64.83	105.56	88.67	133.56	158.93	108.83	41.23	72.25	132.41	145.66	270.59	90.97	356.71	134.75	118.79	95.58	33.09	72.11	42.46	46.52
11	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	8.09	0.00	0.00	0.00	0.00	2.33	0.00	0.00	0.00	2.29	0.00
12	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I1	Intron	0	19.71	10.13	3.49	2.66	2.30	13.43	5.02	3.16	4.55	6.61	4.84	8.74	1.64	11.28	9.34	13.17	21.67	15.80	19.60	6.97	8.60	2.25	2.25	7.10	4.96	5.77	3.02	4.40	4.08
14	I1_SR1	SilentIntronRegion	0	6.17	0.00	0.00	3.88	0.00	2.27	0.00	0.79	0.87	0.80	1.00	0.93	0.00	0.91	0.00	3.77	1.78	5.63	0.00	2.01	0.96	0.00	0.00	1.84	0.00	3.43	0.00	3.03	0.82
15	I1_AR1	ActiveIntronRegion	0	7.75	0.00	0.00	7.31	0.00	1.59	0.00	3.26	1.12	1.44	0.92	1.24	0.00	0.14	0.00	3.70	3.01	5.67	4.18	2.81	1.43	0.00	0.00	1.49	0.00	4.35	0.00	4.39	1.34
16	I1_AR2	ActiveIntronRegion	0	8.06	2.18	0.99	0.17	1.13	2.44	3.04	1.20	0.52	1.10	0.22	1.51	0.61	4.18	5.88	3.36	3.45	6.95	4.76	3.97	2.36	1.35	1.14	2.48	1.14	2.72	0.63	3.25	1.34
17	I1_SR2	SilentIntronRegion	0	26.23	3.13	4.43	0.00	0.00	4.39	8.16	3.68	0.54	7.91	1.19	4.59	1.30	9.59	1.07	5.78	10.88	8.58	13.36	2.81	1.63	2.83	2.07	5.53	2.65	2.99	0.00	3.10	3.13
18	I1_AR3	ActiveIntronRegion	0	25.69	14.51	4.83	3.71	3.03	19.31	6.18	4.16	6.68	9.43	7.26	12.59	2.21	15.20	11.69	18.36	31.38	20.61	27.62	8.72	12.05	2.78	2.91	9.56	7.05	7.36	4.36	5.02	5.53
19	E2_Aa	NovelBoundary	0	10.32	12.70	3.79	0.00	6.34	16.19	5.66	0.00	12.64	6.15	0.00	9.64	3.06	13.83	34.28	21.34	7.72	9.25	32.37	7.69	13.36	6.76	2.02	14.95	4.89	8.75	0.00	0.00	6.87
20	ER2a	ExonRegion	0	692.52	295.53	48.49	139.31	139.57	292.05	286.74	312.34	185.62	244.84	236.45	215.49	299.21	270.36	283.30	355.40	162.01	324.68	456.28	581.57	268.37	396.93	336.67	219.02	324.82	146.82	156.66	112.28	140.10
21	E2_Da	NovelBoundary	0	10.44	17.84	0.00	0.00	0.00	4.64	4.63	0.00	6.52	1.76	0.00	7.98	0.00	3.72	0.00	0.00	8.94	0.00	8.09	23.65	9.87	0.00	0.00	0.00	3.83	0.00	0.00	2.20	2.05
22	E2a_E3a	KnownJunction	0	556.88	407.87	65.48	173.42	170.21	347.69	548.52	227.48	265.27	463.73	386.38	327.55	428.78	323.15	456.64	668.83	251.56	402.50	840.94	713.69	353.69	218.34	650.15	234.96	473.03	229.33	254.80	186.15	225.42
23	I2	Intron	0	5.32	2.13	0.83	1.19	6.47	4.10	2.34	0.61	2.97	3.11	0.99	3.57	0.54	2.40	10.66	4.81	4.45	6.43	19.57	3.07	7.32	0.90	0.60	5.70	1.18	0.78	3.34	1.88	0.99
24	I2_AR1	ActiveIntronRegion	0	5.36	2.15	0.84	1.19	6.51	4.12	2.35	0.61	2.99	3.13	0.99	3.59	0.54	2.41	10.73	4.85	4.48	6.47	19.70	3.09	7.37	0.90	0.60	5.73	1.19	0.79	3.36	1.90	1.00
25	E3_Aa	NovelBoundary	0	13.92	9.40	0.00	0.00	13.26	3.30	2.12	0.00	5.57	2.04	3.10	3.95	1.62	3.23	26.11	7.04	2.79	4.62	32.37	4.13	6.06	4.33	0.00	2.45	6.59	0.00	0.00	2.02	0.00
26	ER3a	ExonRegion	0	723.53	395.48	335.11	567.29	487.19	341.31	414.85	345.29	267.01	354.64	409.96	505.78	448.36	410.71	342.14	352.69	353.34	310.10	670.87	562.71	268.63	345.53	604.54	308.07	457.56	267.23	414.05	308.03	268.79
27	E3_Da	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	3.56	0.00	0.00	1.97	0.00	8.37	3.82	1.89	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3a_E4a	KnownJunction	0	946.54	629.50	338.42	1196.88	889.83	453.24	617.18	539.06	413.42	544.22	704.22	628.69	613.86	536.54	630.25	513.08	472.54	389.91	1238.15	618.67	350.48	487.92	747.41	388.44	697.16	358.63	653.22	332.99	330.60
29	I3	Intron	0	0.76	1.55	0.34	1.46	0.25	2.31	1.13	0.23	2.96	1.25	1.24	1.59	0.64	0.91	2.44	1.23	2.36	1.59	4.23	0.14	1.82	0.28	0.14	1.15	1.09	1.12	0.61	1.16	0.49
30	I3_SR1	SilentIntronRegion	0	1.20	0.00	0.94	0.00	0.00	2.31	0.38	0.00	5.23	0.27	0.67	1.15	1.33	1.77	3.77	1.85	3.07	1.44	4.18	0.00	1.33	0.67	0.68	0.00	1.60	0.59	0.68	1.83	0.75
31	I3_SR2	SilentIntronRegion	0	1.57	0.51	0.00	3.29	0.00	2.80	1.48	0.51	3.32	1.32	0.63	1.19	0.42	1.02	3.28	0.60	1.85	2.10	7.16	0.51	1.90	0.66	0.00	1.18	0.43	2.45	0.26	0.85	0.18
32	I3_AR3	ActiveIntronRegion	0	0.59	1.89	0.36	4.65	0.00	4.30	0.84	0.16	3.17	1.08	3.57	1.73	0.00	1.98	1.00	0.19	2.61	1.72	3.34	0.00	1.39	0.00	0.00	0.00	1.14	0.66	1.37	1.17	0.16
33	I3_AR4	ActiveIntronRegion	0	0.56	1.17	0.62	0.00	0.00	0.13	0.04	0.40	0.86	0.81	1.92	1.97	0.00	0.35	3.43	0.00	1.70	1.27	6.77	0.00	0.67	0.00	0.00	1.92	1.37	2.37	0.68	0.73	0.72
34	I3_AR5	ActiveIntronRegion	0	0.00	8.49	0.00	0.00	0.00	0.00	0.17	0.00	1.69	0.96	0.00	1.86	0.00	0.00	0.00	0.00	6.01	2.05	2.64	0.00	3.33	0.00	0.00	5.20	1.43	1.57	1.83	1.63	0.00
35	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	6.19	0.00	0.00	0.00	4.63	0.00	0.00	0.00	0.00	0.86	9.97	0.00	3.11	0.00	0.00	0.00	1.60	0.00	0.00	2.93	0.00	4.16	0.00	0.00	4.75
36	ER4a	ExonRegion	0	956.44	589.01	362.21	942.79	649.08	474.87	520.66	570.42	405.91	499.79	625.26	615.40	634.16	546.33	419.77	484.49	461.03	378.11	1053.18	646.80	366.99	541.16	680.35	417.75	661.64	389.38	642.17	359.70	355.69
37	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.00	9.37	0.00	2.57	0.00	0.00	0.00	5.46	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E4a_E5a	KnownJunction	0	948.49	483.39	300.55	661.53	471.59	354.13	478.43	423.11	360.65	385.35	442.98	625.14	630.23	486.32	383.09	403.45	421.33	372.45	712.14	578.07	326.86	478.73	569.57	364.16	503.95	336.19	447.82	332.94	343.60
39	I4_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.67	0.00	0.00	3.37	0.40	0.00	0.43	0.45	1.54	1.65	0.00	1.93	2.13	0.00	0.48	0.60	0.00	0.00	0.00	0.00	0.00	0.54	0.00
40	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.23	1.87	0.00	1.13	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER5a	ExonRegion	0	858.70	525.98	307.04	475.32	364.58	409.65	490.62	462.99	373.60	472.58	491.66	706.00	628.22	565.61	410.89	396.74	479.10	355.53	815.70	599.18	329.38	484.91	651.23	376.10	539.32	398.76	593.70	396.79	405.13
42	E5_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.83	0.00	0.00	0.00	3.30	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E5a_E6a	KnownJunction	0	1041.80	672.35	310.84	785.12	391.27	568.11	615.35	515.62	495.19	496.40	545.95	654.51	703.95	531.23	584.60	526.23	497.97	405.71	1511.49	698.23	436.44	534.89	786.91	487.97	680.30	402.88	787.06	472.01	353.84
44	E5a_E7a	NovelJunction	0	2.83	0.00	1.40	0.00	0.00	0.00	0.00	2.54	1.16	1.88	0.00	1.75	2.87	2.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E5a_E9a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	0.00	0.00	0.00	0.00	2.21	1.48	0.00	0.00	1.71	5.45
47	ER6a	ExonRegion	0	911.47	649.39	431.16	853.28	518.46	505.12	590.33	406.07	462.90	482.59	607.48	620.32	649.65	539.94	419.59	417.56	428.27	379.31	1067.93	638.82	413.00	450.73	752.02	477.39	624.05	366.60	780.71	387.40	403.07
48	E6_Da	NovelBoundary	0	6.02	4.17	0.00	0.00	0.00	1.50	2.35	0.00	3.59	2.04	3.04	3.28	0.00	3.92	0.00	3.75	8.76	4.62	0.00	0.00	0.00	0.00	4.88	2.39	8.75	0.00	0.00	0.00	0.00
49	E6a_E7a	KnownJunction	0	865.20	834.16	407.56	982.26	576.66	570.33	703.74	359.16	548.27	436.84	790.11	536.07	522.47	483.28	473.78	420.90	397.96	392.74	1261.30	707.08	473.06	391.66	683.49	533.55	661.29	296.32	816.18	368.21	313.66
50	I6	Intron	0	1.12	2.72	0.49	0.75	0.25	3.31	0.98	0.51	2.83	2.60	2.21	2.70	0.99	1.67	1.84	1.72	4.56	2.28	2.83	0.48	2.20	0.13	0.47	1.60	1.54	0.79	1.11	1.58	0.26
51	I6_SR1	SilentIntronRegion	0	1.12	2.73	0.49	0.75	0.25	3.32	0.98	0.51	2.83	2.61	2.21	2.70	0.99	1.67	1.84	1.73	4.56	2.29	2.83	0.48	2.20	0.13	0.47	1.61	1.54	0.79	1.11	1.59	0.26
52	E7_Aa	NovelBoundary	0	0.00	12.02	0.00	9.06	6.34	1.96	4.52	0.00	2.77	6.03	2.78	5.54	0.00	2.37	16.74	0.00	9.72	4.62	16.18	0.00	2.05	0.00	0.00	0.00	5.38	0.00	0.00	0.00	0.00
53	ER7a	ExonRegion	0	856.49	676.17	360.88	887.55	519.32	734.66	821.77	464.79	424.09	561.81	900.94	537.05	588.64	497.29	483.43	436.09	408.79	359.76	1104.05	654.56	584.97	435.08	741.29	545.47	643.23	336.57	1000.84	374.65	357.23
54	E7_Da	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	2.99	2.17	0.00	3.65	4.07	0.00	0.00	0.00	2.37	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	E7a_E8a	KnownJunction	0	839.19	611.76	453.43	935.24	434.75	768.43	853.30	467.40	472.17	550.89	794.03	489.51	636.79	496.11	589.99	433.21	400.55	395.57	1139.91	607.26	611.76	491.13	739.29	475.17	590.21	316.28	984.06	421.86	360.51
56	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	1.92	0.00	1.30	0.00	0.89	0.00	0.00	1.40	0.00	0.00	0.00	2.05	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
57	ER8a	ExonRegion	0	808.81	649.62	453.97	948.82	515.78	897.80	1024.99	536.26	469.85	584.48	1091.36	605.09	690.68	471.41	572.53	481.25	505.15	339.55	1034.15	597.66	703.97	438.73	807.80	538.71	610.22	387.59	1291.82	457.32	358.19
58	E8_Da	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.23	0.00	1.13	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	4.17	0.00	0.00
59	E8a_E9a	KnownJunction	0	919.11	568.23	388.62	1148.99	569.44	893.77	1090.34	667.21	705.58	625.11	892.92	590.74	781.84	488.13	859.47	455.32	541.10	378.10	792.84	574.76	763.26	546.99	780.66	484.92	558.24	454.33	1211.43	528.93	423.66
60	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	7.53	0.00	0.00	0.00	0.00	7.19	4.61	0.00	16.18	0.00	10.43	2.09	1.87	0.00	0.00	4.03	0.00	0.00	2.05
61	ER9a	ExonRegion	0	38.25	33.88	35.09	82.10	48.79	45.79	55.98	28.18	31.71	31.44	52.77	37.79	42.73	20.27	38.72	26.84	34.19	18.85	51.03	27.78	34.94	20.33	43.64	23.00	29.84	22.16	73.89	27.15	23.34