Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF668	Gene	0	8.31	5.85	19.09	7.84	6.34	11.87	3.67	3.41	8.15	13.98	8.47	14.77	15.17	17.20	6.06	12.05	15.67	14.08	5.50	3.41	12.83	13.17	18.32	11.23	14.86	19.62	9.16	16.18	14.27
2	300849	Transcript	0	12.69	11.95	28.95	16.73	15.73	34.06	4.85	5.57	16.27	36.69	27.70	25.39	24.98	29.70	4.92	27.32	18.27	16.62	11.53	2.06	29.74	13.62	27.49	21.61	25.09	37.98	27.74	28.54	23.72
3	414399	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	394983	Transcript	0	3.56	1.32	2.20	0.99	0.68	0.57	0.56	0.26	0.39	1.00	0.99	1.20	0.40	1.91	0.00	1.89	2.06	1.09	0.00	0.58	2.47	2.74	1.25	0.60	1.78	2.61	0.13	2.26	1.57
5	417935	Transcript	0	2.26	0.93	0.95	0.00	0.00	0.40	0.58	0.00	0.49	0.81	1.03	2.51	2.49	3.34	0.10	2.10	3.84	0.65	0.93	2.48	3.39	7.06	4.14	0.00	2.31	4.34	1.92	7.87	2.99
6	442862	Transcript	0	2.49	3.68	1.76	2.96	0.63	5.28	2.44	0.00	1.16	6.87	0.24	3.11	0.00	8.57	3.99	9.30	14.16	22.88	5.40	0.41	19.16	2.33	3.72	9.70	35.37	23.52	9.29	2.17	16.14
7	426488	Transcript	0	1.45	0.00	0.01	0.00	0.00	0.61	0.30	0.00	0.40	0.95	0.17	0.73	0.90	0.74	0.00	0.38	0.93	0.29	0.45	0.41	0.21	0.79	0.54	0.00	1.52	2.73	3.00	0.24	0.40
8	IG48	Intergenic	0	0.59	1.77	2.29	0.00	0.00	4.15	0.00	0.50	0.00	0.40	0.33	2.37	0.36	4.10	0.00	3.21	2.87	7.92	0.88	1.51	2.35	0.49	2.97	0.59	2.35	1.72	1.51	1.34	0.74
9	IG48_AR2	ActiveIntergenicRegion	0	1.82	0.00	2.02	0.00	0.00	1.03	0.00	0.00	0.00	1.01	0.00	0.31	1.10	1.00	0.00	0.00	1.70	0.55	0.00	0.00	0.07	0.00	3.35	0.00	2.22	0.00	0.00	0.82	0.00
10	IG48_SR1	SilentIntergenicRegion	0	0.72	2.93	2.84	0.00	0.00	3.81	0.00	0.93	0.00	0.53	0.13	1.73	0.44	4.03	0.00	3.46	4.01	12.08	0.00	2.14	2.57	0.91	3.29	1.09	2.72	1.88	2.48	2.31	0.86
11	IG48_AR1	ActiveIntergenicRegion	0	0.00	0.52	1.57	0.00	0.00	5.80	0.00	0.00	0.00	0.00	0.76	4.14	0.00	5.30	0.00	3.94	1.48	3.81	2.59	1.03	2.78	0.00	2.44	0.00	1.88	2.07	0.47	0.00	0.79
12	ER1a	ExonRegion	0	12.69	11.95	28.95	16.73	15.73	34.06	4.85	5.57	16.27	36.69	27.70	25.39	24.98	29.70	4.92	27.32	18.27	16.62	11.53	2.06	29.74	13.62	27.49	21.61	25.09	37.98	27.74	28.54	23.72
13	E1_Ab	KnownBoundary	0	5.49	0.00	31.54	56.73	35.22	7.64	5.49	2.29	12.49	5.59	13.38	16.54	26.88	27.45	8.37	33.81	14.88	33.91	8.09	0.00	20.34	36.56	37.87	16.57	10.46	22.87	14.01	17.61	28.95
14	ER1b	ExonRegion	0	5.46	8.49	41.83	20.56	26.22	11.13	8.22	3.96	6.87	23.94	11.16	25.20	27.50	28.14	2.43	32.47	19.54	23.02	12.38	3.34	27.21	29.22	48.21	24.64	16.56	41.75	14.31	19.96	28.59
15	E1a_E6a	KnownJunction	0	2.42	3.88	43.83	0.00	0.00	14.31	7.21	8.91	6.49	29.36	7.02	27.20	25.00	17.50	0.00	20.81	24.17	18.49	24.28	11.91	23.95	22.80	40.38	28.65	23.11	62.65	16.35	22.38	30.14
16	E2_Aa	NovelBoundary	0	0.00	0.00	2.49	0.00	13.85	3.41	0.00	0.00	0.00	0.00	0.00	3.07	0.00	5.05	0.00	0.00	7.09	0.00	0.00	0.00	3.89	0.00	2.07	0.00	5.64	1.85	0.00	6.29	2.91
17	ER2a	ExonRegion	0	7.13	2.63	4.40	1.99	1.35	1.14	1.12	0.51	0.78	2.00	1.98	2.39	0.81	3.82	0.00	3.78	4.12	2.18	0.00	1.15	4.94	5.47	2.51	1.19	3.55	5.23	0.25	4.52	3.14
18	E2_Da	NovelBoundary	0	2.65	0.00	3.09	0.00	0.00	12.97	0.00	0.00	1.34	1.56	1.20	4.40	5.60	9.24	0.00	7.27	6.80	0.00	8.09	0.00	15.12	4.81	0.00	2.81	6.55	2.02	0.00	1.80	2.81
19	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3_Aa	NovelBoundary	0	10.44	0.00	3.36	9.06	0.00	1.73	0.00	0.00	0.00	0.00	3.04	6.17	1.62	1.09	0.00	3.67	2.39	0.00	0.00	0.00	13.28	15.51	2.51	0.00	3.79	1.76	0.00	1.66	0.00
21	ER3a	ExonRegion	0	2.34	1.87	0.38	0.00	0.00	0.80	1.17	0.00	0.97	1.62	2.07	2.61	3.35	3.79	0.19	1.21	4.61	1.30	1.85	1.82	3.32	4.40	1.83	0.00	3.13	3.54	2.00	4.41	1.92
22	E3_Da	NovelBoundary	0	3.01	0.00	12.41	8.41	0.00	0.00	5.26	0.00	3.05	3.67	1.58	2.50	0.00	4.14	0.00	0.00	6.71	0.00	0.00	0.00	12.43	2.33	2.27	0.00	0.00	4.03	4.37	10.87	0.00
23	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E6a	KnownJunction	0	2.18	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	1.62	2.88	0.00	2.98	3.06	0.00	0.00	3.14	3.45	9.72	6.45	0.00	1.48	5.15	1.84	11.32	4.06
25	I3_AR1	ActiveIntronRegion	0	1.74	0.68	0.46	0.94	0.00	1.04	1.14	0.48	3.62	1.50	0.63	1.23	1.87	2.15	3.14	1.12	3.14	2.20	0.84	0.26	1.42	0.71	0.09	1.41	1.50	1.24	0.24	3.42	0.99
26	I3_AR2	ActiveIntronRegion	0	0.00	0.91	0.00	0.00	0.00	1.42	0.00	0.00	0.00	0.60	0.00	2.15	0.00	1.64	0.00	0.00	2.94	3.39	0.00	0.00	1.25	1.83	0.00	0.00	0.00	0.00	0.00	0.00	1.34
27	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.84	0.00	2.54	1.89	0.00	3.23	2.95	0.00	4.21	8.37	0.00	7.97	9.25	0.00	0.00	5.37	6.76	1.92	0.00	5.11	17.47	0.00	5.71	8.68
28	ER4a	ExonRegion	0	1.79	4.47	2.83	8.87	1.88	3.34	2.91	0.00	0.57	6.30	0.72	1.22	0.00	9.95	0.00	12.82	13.65	19.46	4.38	1.24	21.51	3.34	4.51	11.53	41.05	29.37	23.39	1.47	18.86
29	E4_Ab	KnownBoundary	0	0.00	4.36	10.22	19.41	7.37	9.25	4.46	0.00	1.55	18.89	1.46	2.80	0.00	20.61	0.00	18.67	34.01	42.25	8.09	4.13	46.45	4.86	9.01	21.41	64.44	41.28	38.57	4.58	39.05
30	ER4b	ExonRegion	0	1.25	3.49	5.21	2.93	2.07	6.53	1.98	0.00	2.99	9.66	0.27	3.25	0.00	8.60	0.00	4.94	18.32	8.69	3.90	0.99	10.03	5.16	2.09	4.43	21.31	12.50	11.10	2.46	17.04
31	E4_Da	KnownBoundary	0	2.71	0.00	0.00	0.00	0.00	3.76	0.00	0.00	0.00	1.56	0.00	1.60	0.00	2.13	0.00	0.00	8.91	4.62	16.18	0.00	0.00	7.29	2.51	0.00	1.74	8.88	0.00	3.50	6.21
32	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER4c	ExonRegion	0	2.74	2.87	2.46	0.00	0.00	4.14	1.67	0.00	1.36	4.40	0.00	3.91	0.00	9.68	3.61	8.57	11.83	16.03	3.74	0.00	20.30	3.66	2.38	12.41	26.48	23.35	4.49	2.74	11.61
34	E4_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	1.34	0.00	1.20	0.00	0.00	1.13	0.00	0.00	2.54	4.62	0.00	3.31	0.00	2.19	0.00	0.00	1.70	1.67	0.00	0.00	0.00
35	E4b_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.63	0.00	3.75	5.78	9.25	8.09	0.00	0.00	0.00	0.00	0.00	3.03	0.00	0.00	0.00	4.36
36	E4b_E6a	KnownJunction	0	2.95	3.68	0.00	0.00	0.00	8.36	2.75	0.00	1.55	9.91	0.00	4.19	0.00	6.09	8.37	6.50	17.02	33.13	8.09	0.00	15.68	0.00	4.28	5.14	38.57	17.85	0.00	2.29	17.96
37	E5_Aa	NovelBoundary	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	3.87	2.72	1.51	0.00	1.82	0.00	0.00	6.75	0.00	8.09	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
38	ER5a	ExonRegion	0	1.35	0.00	0.02	0.00	0.00	1.84	0.90	0.00	1.21	0.92	0.52	2.19	0.88	2.23	0.00	1.13	1.97	0.86	1.35	1.23	0.64	0.24	1.62	0.00	4.56	4.03	9.01	0.73	1.20
39	E5_Da	NovelBoundary	0	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	4.62	8.09	0.00	3.93	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
40	E5a_E6a	KnownJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	1.82	0.00	0.00	0.00	0.83	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	4.16	0.00	0.00	0.00
41	I5_SR1	SilentIntronRegion	0	2.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	1.77	0.00	0.00	0.00	4.17	0.00	2.89	0.00	3.26	1.57	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00
42	I5_AR1	ActiveIntronRegion	0	0.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.28	1.00	0.00	0.00	0.00	1.24	0.00	2.29	0.00	0.50	1.62	0.00	0.00	0.00	1.05	0.00	0.00	0.00	0.00	0.00
43	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	13.26	7.06	0.00	0.00	0.00	2.00	1.61	4.55	0.00	2.15	0.00	3.82	0.92	0.00	0.00	3.47	0.00	0.00	0.00	2.45	1.93	0.00	0.00	0.00	0.00
44	ER6a	ExonRegion	0	12.13	9.50	31.02	9.39	9.70	18.19	6.16	7.05	15.11	20.00	9.64	26.63	28.87	41.04	18.72	26.80	27.00	35.83	14.28	10.55	24.33	35.78	37.05	25.68	32.76	29.84	13.04	26.33	30.42
45	E6_Da	KnownBoundary	0	14.22	16.58	27.01	21.14	6.63	20.57	8.12	16.12	21.53	33.95	20.69	28.95	44.23	45.95	27.31	10.25	44.66	38.27	8.09	0.00	32.25	15.61	43.64	28.23	44.14	49.48	22.02	30.10	50.25
46	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER6b	ExonRegion	0	21.64	12.88	30.47	16.45	9.03	24.14	5.70	5.09	24.84	43.09	21.09	47.39	52.87	60.77	24.85	23.57	46.38	44.05	17.33	9.13	25.21	31.04	60.66	40.47	43.53	55.40	30.51	45.51	49.09
48	E6_Db	KnownBoundary	0	24.95	17.16	37.32	39.69	33.01	31.77	5.21	7.37	20.83	45.46	20.15	43.85	53.66	66.40	42.06	40.09	49.52	63.83	32.15	13.98	22.54	48.28	64.76	35.17	31.79	54.67	26.99	80.56	50.74
49	ER6c	ExonRegion	0	31.42	21.25	70.74	57.26	35.51	30.89	13.55	9.44	24.07	36.99	15.85	46.13	52.84	59.56	25.02	29.83	45.97	43.49	18.20	17.10	26.59	58.68	66.02	31.35	41.27	38.82	29.85	63.99	43.89
50	E6_Dc	KnownBoundary	0	24.54	30.35	71.08	72.26	26.82	29.31	26.03	11.55	31.06	31.44	20.40	38.46	51.91	40.75	45.25	29.30	24.40	32.36	16.18	14.72	40.11	60.24	65.31	28.47	48.57	33.26	21.47	46.64	27.96
51	ER6d	ExonRegion	0	26.16	25.99	70.72	59.79	20.66	26.56	13.99	18.36	20.09	29.89	12.46	24.81	40.65	54.98	44.31	30.29	33.62	30.18	13.58	14.96	24.21	39.61	56.91	27.71	29.34	26.02	5.93	36.96	20.88
52	E6_Dd	KnownBoundary	0	31.14	12.51	48.58	18.55	19.01	20.45	4.98	17.17	18.52	20.93	12.08	15.57	26.72	60.20	87.10	23.94	33.18	27.74	8.09	11.83	18.21	25.38	52.06	34.81	20.23	19.01	0.00	33.16	21.92
53	ER6e	ExonRegion	0	30.21	15.84	61.04	18.42	15.89	31.87	13.36	13.81	27.87	34.95	19.22	51.16	55.03	52.69	27.16	28.72	57.55	49.65	13.08	12.98	27.48	48.04	62.94	32.91	37.92	51.36	13.62	53.43	41.63
54	E6_De	NovelBoundary	0	0.00	0.00	3.09	0.00	5.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.32	0.00	0.00	1.40	4.62	0.00	0.00	0.00	0.00	0.00	2.87	0.00	4.03	3.98	2.29	0.00
55	E6e_E7a	KnownJunction	0	24.83	0.00	84.21	46.59	46.27	23.06	17.97	9.11	41.02	39.91	19.30	58.58	67.48	55.92	18.14	42.92	63.86	50.99	16.18	6.29	37.74	39.62	53.78	32.00	48.38	81.75	9.34	70.09	49.26
56	I6	Intron	0	0.62	0.46	2.17	3.10	1.41	0.79	0.87	0.27	2.18	4.37	0.51	1.24	1.77	1.82	2.91	0.71	1.94	2.78	2.30	0.40	2.26	0.52	2.34	1.86	1.44	3.62	2.90	2.35	0.77
57	I6_SR1	SilentIntronRegion	0	0.62	0.47	2.18	3.12	1.42	0.80	0.88	0.27	2.19	4.39	0.52	1.25	1.78	1.83	2.93	0.72	1.95	2.79	2.31	0.40	2.27	0.52	2.36	1.87	1.45	3.64	2.92	2.36	0.77
58	E7_Aa	NovelBoundary	0	5.43	0.00	2.34	0.00	0.00	0.00	5.38	0.00	2.77	5.79	0.00	5.90	1.27	4.19	0.00	0.00	1.40	4.62	0.00	0.00	3.49	0.00	6.50	4.85	1.63	2.06	2.39	2.29	3.37
59	ER7a	ExonRegion	0	12.13	6.47	39.27	8.05	5.26	13.31	7.59	6.30	14.35	17.19	8.41	25.42	29.69	22.85	6.48	15.23	34.15	24.06	5.41	8.50	17.93	28.62	35.01	13.73	19.63	37.84	6.84	30.92	22.01
60	E7_Da	KnownBoundary	0	10.97	9.70	41.33	8.84	0.00	8.98	10.70	6.27	25.25	13.98	8.45	18.95	25.03	12.98	0.00	22.34	32.71	18.49	16.18	4.13	18.33	15.07	26.20	13.52	13.79	25.88	5.02	24.71	19.84
61	ER7b	ExonRegion	0	0.22	0.57	4.76	0.57	0.40	0.34	0.26	0.10	0.40	1.11	0.60	1.68	1.08	0.54	0.02	0.68	1.79	1.09	0.54	0.12	0.49	0.17	1.58	0.30	0.73	2.21	0.46	1.81	1.10