Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	JMJD5	Gene	0	15.75	15.73	38.65	15.33	3.82	16.34	13.20	10.58	32.49	24.17	13.74	24.11	23.68	14.45	14.53	15.85	18.98	22.36	20.67	6.20	15.85	25.02	24.47	22.62	11.43	13.47	9.58	22.65	17.28
2	380948	Transcript	0	0.00	0.33	0.00	0.00	0.00	0.96	0.00	0.00	0.45	1.72	0.00	0.00	0.00	1.24	0.00	0.00	0.50	0.00	0.00	0.00	0.00	0.92	0.18	1.41	0.00	0.00	0.00	0.08	0.13
3	286096	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	441782	Transcript	0	0.00	3.30	0.00	0.00	0.00	0.00	0.00	0.23	0.00	0.18	0.00	0.00	0.16	0.00	0.00	0.31	0.19	0.24	0.00	0.00	0.01	0.00	0.00	0.27	0.00	0.00	0.00	0.21	0.00
5	ER1a	ExonRegion	0	0.00	0.66	0.00	0.00	0.00	0.00	0.00	0.00	0.90	1.44	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.16	0.27
6	ER1b	ExonRegion	0	11.93	5.45	30.34	25.93	7.07	7.16	2.92	3.67	12.05	11.23	5.60	12.98	12.69	7.04	13.98	11.09	10.81	16.65	12.71	1.99	4.61	10.33	11.13	2.33	5.02	11.16	7.29	9.39	9.72
7	E1a_E3a	KnownJunction	0	4.54	0.00	8.77	0.00	0.00	3.45	0.00	2.54	3.14	1.64	0.00	6.51	8.44	3.43	0.00	0.00	5.87	4.62	0.00	0.00	1.89	1.90	4.78	0.00	1.93	6.39	0.00	0.00	6.34
8	ER2a	ExonRegion	0	0.00	1.94	0.00	0.00	0.00	0.00	0.00	0.47	0.00	0.37	0.00	0.00	0.33	0.00	0.00	0.63	0.38	0.49	0.00	0.00	0.02	0.00	0.00	0.55	0.00	0.00	0.00	0.41	0.00
9	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	0.00	4.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.36	3.05	0.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.62	0.00	0.00	0.00
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	18.84	9.33	25.15	15.68	2.83	10.71	8.60	7.31	17.64	17.73	10.84	19.92	15.10	12.66	7.18	13.43	12.05	20.37	11.72	5.07	10.84	21.99	19.22	16.96	7.61	9.96	4.52	10.63	12.05
14	E3_Da	NovelBoundary	0	0.00	3.59	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	2.83	0.00	0.00	7.97	0.00	1.15	0.00	8.09	0.00	1.60	4.96	0.00	2.27	0.00	0.00	0.00	0.00	0.00
15	E3a_E4a	KnownJunction	0	12.98	17.06	46.32	50.90	0.00	14.00	4.92	4.73	8.13	23.97	11.39	13.92	12.48	14.84	16.14	27.31	11.52	10.02	0.00	0.00	19.69	11.62	18.37	7.72	5.11	1.85	4.57	15.82	23.44
16	E3a_E5a	NovelJunction	0	0.00	0.00	2.67	0.00	0.00	0.00	2.75	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00
17	E3a_E6a	NovelJunction	0	0.00	4.36	3.89	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	1.60	0.00	1.13	0.00	0.00	0.00	0.00	0.00	4.05	1.60	0.00	0.00	0.00	1.59	0.00	0.00	0.00	0.00
18	E3a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	1.55	0.00	0.00	0.00	5.00	1.11	0.00	0.00	0.90	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	1.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	2.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	2.81	0.00	0.00	0.00	0.00	0.00
21	I3	Intron	0	2.59	2.81	2.10	1.00	0.23	3.77	1.78	1.46	6.26	1.81	0.28	3.50	0.12	0.84	3.77	2.39	3.47	4.74	3.12	1.63	1.59	1.43	0.67	2.50	2.39	0.73	1.02	1.74	1.09
22	I3_AR1	ActiveIntronRegion	0	4.69	1.88	3.41	2.25	0.00	4.53	2.84	2.89	5.18	2.49	0.93	3.87	0.20	0.78	1.72	1.84	3.72	5.14	2.51	3.33	1.79	3.39	0.57	2.70	4.04	1.71	1.15	1.28	2.53
23	I3_SR2	SilentIntronRegion	0	0.97	5.81	0.00	3.24	0.00	1.86	0.91	0.00	4.55	0.00	0.00	1.95	0.00	0.00	4.56	1.12	0.67	0.87	2.88	1.24	0.00	0.81	0.00	0.97	0.65	0.00	0.00	2.21	0.61
24	I3_AR2	ActiveIntronRegion	0	0.72	1.08	0.56	0.00	0.00	2.31	2.03	0.00	0.94	0.97	0.00	4.13	0.00	0.61	3.10	1.66	2.50	3.88	3.22	0.00	0.00	1.21	0.00	2.17	2.40	0.00	0.00	0.00	0.67
25	I3_AR3	ActiveIntronRegion	0	3.39	5.10	3.44	0.00	0.77	6.31	1.60	2.04	13.39	2.74	0.00	5.37	0.21	1.65	6.57	5.11	6.15	8.14	5.57	1.75	3.39	0.57	1.15	3.75	2.72	0.75	2.32	3.87	0.53
26	E4_Aa	NovelBoundary	0	0.00	3.59	6.15	0.00	0.00	5.41	10.47	0.00	6.03	0.00	0.00	6.42	1.62	2.13	7.57	0.00	16.63	0.00	8.09	0.00	4.69	0.00	0.00	14.59	6.55	1.67	2.29	4.40	1.68
27	ER4a	ExonRegion	0	14.40	15.11	46.88	13.27	6.71	19.85	14.34	9.88	23.04	31.56	14.86	28.44	20.43	16.56	16.77	25.02	18.81	23.83	24.72	10.35	20.39	22.63	29.24	14.59	11.03	18.20	16.56	25.12	18.29
28	E4_Da	NovelBoundary	0	0.00	0.00	9.82	0.00	0.00	0.00	2.46	0.00	1.89	0.00	0.00	4.49	4.97	0.00	0.00	0.00	7.18	4.62	0.00	0.00	0.00	0.00	0.00	2.33	0.00	2.19	0.00	2.20	1.45
29	E4a_E5a	KnownJunction	0	16.63	12.31	43.63	9.27	12.38	16.61	25.40	9.75	27.89	25.45	7.78	33.88	29.68	12.10	0.00	38.63	25.10	33.91	24.28	0.00	13.24	18.67	20.04	17.77	7.31	2.15	4.77	21.93	13.54
30	I4	Intron	0	1.09	1.63	13.12	1.36	0.00	2.78	1.40	0.35	8.83	4.93	1.13	3.12	1.31	2.24	8.02	3.61	5.95	1.75	9.91	1.47	5.14	2.05	2.17	6.81	3.44	6.26	0.93	6.60	2.96
31	I4_AR1	ActiveIntronRegion	0	1.09	1.63	13.15	1.36	0.00	2.79	1.40	0.35	8.85	4.95	1.13	3.13	1.31	2.24	8.04	3.62	5.97	1.75	9.93	1.48	5.16	2.06	2.18	6.82	3.44	6.28	0.93	6.61	2.97
32	E5_Aa	NovelBoundary	0	3.01	0.00	11.41	0.00	0.00	0.00	2.75	0.00	7.70	7.51	0.00	6.11	0.00	4.76	0.00	0.00	10.56	0.00	16.18	0.00	11.95	0.00	1.87	7.30	0.00	16.26	2.34	12.27	0.00
33	ER5a	ExonRegion	0	18.18	12.20	47.83	29.69	6.59	20.11	13.61	12.36	30.24	26.16	22.85	38.24	23.60	16.63	19.45	23.75	34.30	24.32	32.43	6.11	25.05	24.75	36.00	28.26	15.94	17.02	10.95	35.95	26.46
34	E5_Da	NovelBoundary	1	2.71	13.09	13.78	0.00	0.00	7.33	0.00	0.00	1.49	1.96	5.44	5.66	0.00	4.25	26.11	0.00	14.61	0.00	16.18	4.13	13.00	0.00	2.46	2.99	6.90	8.54	0.00	26.55	3.27
35	E5a_E6a	KnownJunction	0	15.45	8.34	50.78	16.61	0.00	18.38	7.78	25.33	38.37	44.50	23.09	32.80	24.65	15.58	16.34	31.82	27.33	13.87	32.37	0.00	21.30	26.50	40.93	41.21	13.41	16.48	8.90	15.73	19.78
36	I5	Intron	0	0.49	4.35	5.58	0.00	1.12	2.69	0.23	0.00	2.78	3.49	0.82	2.34	1.34	2.29	6.26	2.86	5.84	2.44	12.87	0.95	5.75	0.83	1.67	4.71	3.13	5.79	0.63	8.26	0.31
37	I5_AR1	ActiveIntronRegion	0	0.94	4.23	4.76	0.00	2.14	2.41	0.44	0.00	3.32	5.05	0.26	3.37	1.28	2.87	6.47	1.09	6.21	2.53	11.89	0.00	8.12	0.79	0.00	6.12	3.75	5.85	0.00	9.27	0.59
38	I5_SR1	SilentIntronRegion	0	0.00	0.00	8.87	0.00	0.00	2.82	0.00	0.00	2.65	1.48	1.64	1.46	0.36	0.57	6.76	4.56	4.53	1.77	10.27	2.53	3.12	1.66	2.04	3.20	2.47	5.75	0.50	5.51	0.00
39	I5_AR2	ActiveIntronRegion	0	0.00	9.65	3.92	0.00	0.00	3.27	0.00	0.00	1.68	2.10	1.25	0.92	2.65	2.92	5.31	5.22	6.59	3.04	18.48	1.45	3.18	0.00	5.28	3.13	2.43	5.82	2.32	9.12	0.00
40	E6_Aa	NovelBoundary	0	2.42	13.48	12.13	0.00	0.00	0.00	2.46	2.49	1.19	0.00	1.46	0.00	3.18	0.00	8.57	2.98	3.74	4.62	16.18	0.00	5.29	2.19	2.46	2.21	3.14	3.95	0.00	5.98	2.91
41	ER6a	ExonRegion	0	19.91	11.68	53.66	14.63	0.00	18.18	15.01	16.45	41.35	50.11	24.83	34.77	37.93	16.89	20.91	24.41	33.44	25.23	32.49	2.81	17.66	40.82	38.46	34.94	12.04	22.32	20.72	34.27	23.80
42	E6_Da	NovelBoundary	1	2.30	0.00	6.70	0.00	0.00	0.00	0.00	2.29	1.55	3.04	1.52	7.89	3.12	3.55	0.00	0.00	12.65	13.87	0.00	3.06	7.66	4.13	2.41	0.00	1.89	12.83	0.00	15.10	0.00
43	E6a_E7a	KnownJunction	0	23.24	18.13	43.58	9.71	0.00	22.75	21.00	10.50	37.64	57.80	25.02	33.58	40.89	13.56	18.34	22.95	31.36	18.49	16.18	0.00	16.32	52.46	31.22	38.52	13.79	32.79	34.54	48.21	29.42
44	I6	Intron	0	2.34	2.83	10.62	2.00	0.00	3.33	2.02	0.99	3.93	3.93	1.00	3.70	0.35	3.30	4.56	2.89	6.32	6.19	7.58	1.12	6.44	2.68	2.78	4.25	2.79	3.99	1.79	7.89	1.62
45	I6_AR1	ActiveIntronRegion	0	1.39	1.98	3.93	0.00	0.00	0.75	0.00	1.57	1.15	1.03	0.42	1.41	0.46	1.39	5.29	1.22	0.74	3.66	8.39	0.98	1.14	0.29	0.33	1.50	0.51	1.59	0.00	3.85	0.68
46	I6_SR1	SilentIntronRegion	0	2.41	2.89	11.10	2.14	0.00	3.51	2.16	0.95	4.12	4.14	1.04	3.86	0.34	3.44	4.51	3.01	6.72	6.37	7.53	1.13	6.81	2.85	2.95	4.45	2.96	4.16	1.92	8.18	1.68
47	E7_Aa	NovelBoundary	0	0.00	4.75	6.50	0.00	0.00	1.92	0.00	0.00	2.86	5.47	0.00	4.13	0.00	2.04	0.00	0.00	5.94	0.00	0.00	3.80	3.97	0.00	2.51	2.33	3.49	10.13	0.00	6.65	1.39
48	ER7a	ExonRegion	0	26.78	17.76	43.52	16.77	4.75	25.06	20.06	17.43	46.85	36.28	26.64	41.60	37.28	22.36	22.51	18.61	37.12	30.69	21.39	7.50	26.50	44.79	39.07	38.76	15.32	18.83	12.00	36.59	28.72
49	E7_Da	NovelBoundary	0	2.60	13.57	9.47	0.00	0.00	0.00	2.52	0.00	6.33	1.88	0.00	4.97	6.40	4.10	0.00	3.06	7.99	4.62	8.09	0.00	0.00	2.33	2.51	10.41	0.00	0.00	0.00	1.71	0.00
50	E7a_E8a	KnownJunction	0	14.04	15.22	30.77	9.27	5.60	16.19	16.71	13.83	33.10	37.51	10.95	29.22	21.18	16.53	24.72	17.52	24.85	9.25	16.18	4.13	15.32	42.93	33.74	30.75	1.63	16.39	11.13	19.23	34.33
51	E7a_E9a	NovelJunction	0	2.89	4.65	7.35	0.00	0.00	0.00	0.00	5.08	1.28	5.51	0.00	1.87	5.16	0.82	0.00	0.00	3.80	4.62	0.00	0.00	2.05	7.29	4.83	8.55	1.89	3.91	19.33	2.16	5.18
52	I7	Intron	0	3.56	3.37	4.79	3.25	0.37	2.18	1.06	1.67	4.23	2.83	1.35	1.21	2.54	2.15	1.87	1.26	1.80	3.78	5.78	0.77	2.05	1.50	0.27	3.25	2.05	1.90	2.35	4.55	0.40
53	I7_SR1	SilentIntronRegion	0	3.70	3.68	5.22	3.54	0.40	2.37	1.16	1.82	4.61	3.09	1.47	1.32	2.77	2.27	2.04	1.37	1.96	4.12	6.04	0.84	2.23	1.62	0.30	3.54	2.22	2.05	2.56	4.96	0.44
54	I7_AR1	ActiveIntronRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00	3.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	E8_Aa	NovelBoundary	0	3.01	0.00	3.81	0.00	0.00	3.72	2.35	0.00	13.79	1.68	0.00	0.00	0.00	1.11	0.00	0.00	5.60	4.62	16.18	0.00	0.00	2.48	2.41	0.00	0.00	0.00	0.00	0.00	1.35
56	ER8a	ExonRegion	0	18.67	19.36	38.32	14.07	10.18	23.92	12.92	14.47	37.15	43.90	17.37	27.62	21.72	17.61	20.72	15.40	22.30	25.12	28.47	5.02	10.60	30.96	33.11	22.78	16.94	7.22	6.99	27.31	16.38
57	E8_Da	NovelBoundary	0	0.00	0.00	8.12	8.84	0.00	1.88	2.57	0.00	1.58	4.87	0.00	0.00	1.62	2.37	8.37	0.00	5.65	0.00	16.18	0.00	5.33	0.00	0.00	5.56	0.00	1.80	0.00	5.93	0.00
58	E8a_E9a	KnownJunction	0	8.91	7.95	49.73	15.96	21.22	19.95	16.99	17.37	39.10	35.83	25.31	33.25	38.02	22.60	8.37	13.46	27.44	18.49	16.18	3.72	11.87	22.46	29.94	24.82	16.40	9.96	15.46	21.88	13.87
59	I8	Intron	0	1.37	2.05	0.00	0.00	0.00	0.00	0.00	0.00	3.58	1.84	0.76	0.00	0.00	0.58	0.00	1.58	0.95	1.23	2.04	0.00	6.37	2.30	2.31	1.37	0.00	3.01	0.00	1.04	0.00
60	I8_SR1	SilentIntronRegion	0	1.40	2.11	0.00	0.00	0.00	0.00	0.00	0.00	3.67	1.89	0.78	0.00	0.00	0.59	0.00	1.62	0.98	1.26	2.09	0.00	6.53	2.36	2.36	1.41	0.00	3.04	0.00	1.07	0.00
61	E9_Aa	NovelBoundary	0	0.00	3.39	10.79	8.84	0.00	15.62	2.86	0.00	11.72	5.55	4.52	3.73	0.00	2.28	0.00	7.27	5.45	0.00	24.28	0.00	4.05	0.00	0.00	2.45	0.00	1.76	0.00	11.14	1.65
62	ER9a	ExonRegion	0	15.77	22.27	49.04	15.26	3.38	20.12	17.63	13.12	46.19	27.42	14.92	26.48	31.22	16.78	17.80	17.38	21.50	25.96	26.17	7.76	19.50	29.30	27.68	29.37	14.49	16.08	12.11	29.05	20.74
63	IG29	Intergenic	0	0.46	1.59	10.06	2.61	0.24	3.25	0.97	0.15	2.49	3.30	1.24	1.86	0.95	3.02	0.64	1.95	4.49	4.20	6.44	1.30	5.54	3.37	3.89	2.45	1.21	3.35	1.48	7.09	1.76
64	IG29_SR1	SilentIntergenicRegion	0	0.46	1.59	10.07	2.61	0.24	3.25	0.97	0.15	2.49	3.30	1.24	1.87	0.95	3.02	0.64	1.95	4.50	4.21	6.45	1.30	5.55	3.37	3.89	2.46	1.21	3.36	1.49	7.10	1.76