Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DCI	Gene	0	151.67	55.86	83.01	156.60	44.77	83.67	247.57	251.84	138.34	102.12	64.63	113.28	245.84	86.24	142.92	81.48	92.98	90.49	89.55	204.47	55.99	116.64	126.45	69.48	94.18	80.47	30.73	192.76	67.13
2	301729	Transcript	0	205.97	76.53	103.59	223.20	62.98	127.44	377.89	356.38	192.54	146.59	93.32	155.34	322.87	113.14	190.92	110.99	120.62	123.32	112.72	272.89	78.29	157.21	180.32	93.79	121.90	112.09	47.90	280.98	86.23
3	ER1a	ExonRegion	0	19.40	21.48	1.36	237.95	48.32	102.43	132.21	144.51	95.16	5.44	1.21	10.60	3.36	3.09	25.37	45.48	3.34	0.00	69.97	6.24	70.71	15.40	4.57	3.27	3.29	97.82	0.00	173.99	6.03
4	E1_Da	NovelBoundary	0	2.60	0.00	0.00	10.14	7.07	1.57	63.28	2.39	8.22	0.00	0.00	4.31	1.53	1.26	0.00	0.00	0.83	0.00	0.00	0.00	12.39	0.00	2.46	0.00	1.82	17.90	0.00	22.56	1.42
5	E1a_E2a	KnownJunction	0	2.54	4.85	3.94	125.10	12.82	27.66	97.49	31.60	22.20	1.96	0.00	7.11	1.34	4.63	18.34	10.63	1.15	0.00	0.00	0.00	15.20	4.33	4.04	0.00	3.26	14.98	0.00	61.20	9.74
6	Ix	Intron	0	0.00	0.00	0.00	0.00	3.00	2.53	2.48	1.13	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	0.00	0.00	0.00	1.00	0.00
7	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	3.04	2.56	2.51	1.15	0.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	1.01	0.00
8	E2_Aa	NovelBoundary	0	2.83	0.00	1.17	10.78	0.00	1.57	2.63	4.33	0.00	0.00	0.00	1.39	3.38	2.46	0.00	3.82	0.83	0.00	0.00	0.00	0.00	8.36	0.00	0.00	0.00	0.00	0.00	4.36	3.07
9	ER2a	ExonRegion	0	46.24	12.13	15.87	66.07	4.28	43.57	105.81	123.40	65.18	19.17	6.86	17.33	44.23	19.98	27.12	23.46	12.23	19.15	21.84	73.23	31.93	35.63	19.24	17.32	14.97	33.18	2.83	63.50	12.68
10	E2a_E3a	KnownJunction	0	136.61	38.30	58.08	145.38	32.13	229.82	367.49	505.92	363.48	46.38	28.22	50.42	128.62	61.97	77.54	96.62	40.11	55.74	80.92	178.71	171.03	131.07	50.09	51.26	46.75	178.87	8.90	168.22	31.23
11	ER3a	ExonRegion	0	182.76	74.45	84.95	170.70	49.04	148.26	348.24	344.14	220.55	118.69	69.17	123.21	268.73	109.19	151.26	116.28	88.39	101.30	132.42	247.47	96.21	138.63	138.01	85.91	99.70	151.15	35.19	308.29	70.26
12	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3a_E4a	KnownJunction	0	218.42	98.31	108.75	172.77	61.90	92.58	310.79	317.85	148.82	169.13	92.12	138.85	349.81	121.46	227.62	108.70	131.45	121.24	88.79	413.58	33.41	159.51	243.29	106.89	138.55	90.55	95.27	424.92	89.47
14	E3a_E5a	NovelJunction	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	3.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45
15	E3a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	2.83	2.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
16	E4_Aa	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	1.96	0.00	0.00	1.34	1.56	0.00	0.00	0.00	1.13	0.00	0.00	3.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	325.84	112.89	108.57	283.35	61.51	123.79	470.07	455.64	221.19	184.43	100.49	197.28	459.06	162.00	234.04	135.71	164.45	194.48	159.02	430.07	73.15	224.31	236.33	134.98	170.29	100.79	32.52	295.46	108.97
18	E4_Da	NovelBoundary	0	2.95	0.00	2.84	0.00	0.00	1.76	0.00	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.86	0.00	0.00	0.00	0.00	2.48	2.31	0.00	1.52	0.00	0.00	0.00	0.00
19	E4a_E5a	KnownJunction	0	275.93	87.35	123.30	397.09	91.81	131.06	472.54	390.81	192.76	194.53	100.06	232.71	428.53	154.30	243.77	141.06	171.90	198.04	178.03	343.61	78.22	197.00	257.23	122.26	134.72	95.61	34.99	329.44	110.07
20	Ix	Intron	0	6.68	0.85	1.50	0.38	0.00	1.81	1.38	2.14	3.70	2.59	1.26	2.90	0.27	2.17	3.34	6.27	7.72	3.75	1.86	1.16	2.11	0.19	0.77	3.41	2.19	0.17	0.19	3.18	1.24
21	Ix_AR2	ActiveIntronRegion	0	4.53	1.21	1.15	1.77	0.00	1.65	1.48	1.26	1.59	1.78	0.59	2.55	0.32	1.59	1.14	2.65	4.50	1.16	4.59	0.11	1.83	0.89	1.40	2.92	1.06	0.21	0.55	2.87	1.02
22	Ix_SR2	SilentIntronRegion	0	1.21	2.02	0.75	0.00	0.00	0.25	0.00	0.52	3.86	0.00	0.73	0.19	0.00	3.07	0.00	4.48	3.98	4.34	4.87	2.81	3.47	0.00	1.81	2.65	0.00	0.93	1.88	1.63	1.34
23	Ix_AR1	ActiveIntronRegion	0	8.00	0.56	1.71	0.00	0.00	2.23	1.37	2.59	4.47	2.78	1.70	3.38	0.34	2.35	4.25	7.21	9.32	4.57	0.83	1.09	2.29	0.00	0.64	3.58	2.72	0.14	0.00	3.51	1.53
24	Ix_SR1	SilentIntronRegion	0	5.82	1.29	1.36	0.00	0.00	0.68	1.70	2.00	3.57	3.85	0.48	2.12	0.00	2.08	3.79	8.45	6.81	4.00	1.28	2.72	1.33	0.00	0.00	3.69	2.28	0.00	0.00	2.71	0.19
25	E5_Aa	NovelBoundary	0	0.00	4.85	0.00	10.57	0.00	1.69	0.00	2.29	0.00	0.00	0.00	11.05	0.00	0.97	8.37	3.82	6.21	4.62	0.00	3.64	1.80	0.00	2.51	2.57	0.00	1.97	0.00	3.86	3.43
26	ER5a	ExonRegion	0	377.23	116.88	281.36	402.98	152.96	183.58	660.77	574.28	286.38	290.10	196.67	295.47	617.00	196.90	345.49	182.63	227.05	227.21	175.43	464.84	115.83	278.48	366.16	161.55	247.99	168.83	91.25	443.14	169.23
27	E5_Da	NovelBoundary	0	6.02	0.00	2.47	10.35	0.00	3.07	0.00	0.00	4.39	3.91	0.00	0.00	0.00	2.26	0.00	0.00	3.35	9.25	0.00	7.11	1.93	0.00	0.00	2.75	1.82	0.00	0.00	2.02	0.00
28	E5a_E6a	KnownJunction	0	428.88	182.65	260.81	355.24	163.73	233.20	789.62	681.74	324.59	380.48	258.68	336.77	677.87	228.01	479.16	233.32	275.96	291.54	234.68	497.27	117.60	344.16	407.79	219.34	296.34	169.94	134.48	581.10	177.38
29	Ix	Intron	0	1.18	4.80	0.92	0.00	0.00	0.00	0.00	0.00	0.62	0.79	1.31	0.68	0.00	0.50	0.00	0.00	0.00	2.11	0.00	0.00	1.56	0.99	0.00	0.00	0.78	0.00	0.00	1.79	0.00
30	Ix_SR3	SilentIntronRegion	0	1.61	6.57	0.91	0.00	0.00	0.00	0.00	0.00	0.66	1.08	1.40	0.93	0.00	0.68	0.00	0.00	0.00	2.13	0.00	0.00	1.80	0.90	0.00	0.00	1.07	0.00	0.00	2.11	0.00
31	E6_Aa	NovelBoundary	0	0.00	0.00	1.49	27.82	0.00	0.00	9.73	4.88	5.21	0.00	0.00	0.00	1.37	2.22	26.11	3.21	5.29	9.25	0.00	0.00	5.46	0.00	0.00	2.87	1.93	6.22	0.00	6.16	1.39
32	Ix_SR2	SilentIntronRegion	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	1.12	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	2.73	0.00	0.00	1.43	1.80	0.00	0.00	0.00	0.00	0.00	1.86	0.00
33	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.36	0.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER6a	ExonRegion	0	323.98	98.25	168.42	250.59	48.76	155.48	538.84	514.85	256.48	232.20	147.94	278.06	601.97	205.57	314.60	166.70	213.77	210.92	181.79	468.49	105.43	247.42	306.29	152.56	221.21	150.56	77.13	398.55	149.05
35	E6_Da	NovelBoundary	0	25.01	0.00	33.54	36.24	0.00	8.59	17.39	5.08	15.10	12.02	2.66	14.94	8.76	8.75	16.74	7.19	19.94	18.49	8.09	4.13	1.72	2.48	17.88	2.87	1.93	0.00	2.29	1.66	2.01
36	E6a_E7a	KnownJunction	0	271.63	114.60	85.03	224.54	63.52	150.25	531.53	433.26	233.48	216.11	179.02	277.13	498.87	161.48	254.53	140.53	184.91	143.33	96.88	329.97	83.07	207.69	257.48	128.06	160.37	166.59	93.03	319.60	148.13
37	Ix	Intron	0	4.37	3.05	8.95	10.97	0.62	5.26	3.34	3.06	7.66	3.13	1.21	2.91	1.74	5.65	5.52	3.39	3.81	8.19	5.30	7.39	4.36	2.07	5.30	3.56	2.55	2.00	1.40	2.70	1.03
38	Ix_AR1	ActiveIntronRegion	0	10.41	6.15	23.68	26.12	1.98	11.68	9.79	5.23	13.87	4.68	1.45	6.23	3.41	12.45	9.69	5.02	9.06	14.27	10.34	16.60	7.51	5.11	12.43	6.97	1.74	2.54	0.74	4.62	1.09
39	Ix_SR1	SilentIntronRegion	0	1.61	1.65	2.20	4.05	0.00	2.33	0.38	2.08	4.85	2.44	1.12	1.40	0.98	2.55	3.64	2.67	1.40	5.44	3.01	3.19	2.95	0.68	2.02	2.02	2.95	1.76	1.72	1.84	1.01
40	E7_Aa	NovelBoundary	1	7.90	9.11	2.39	0.00	7.07	0.00	0.00	0.00	12.94	3.36	0.00	8.95	2.80	8.24	0.00	3.82	23.57	9.25	0.00	7.28	3.29	0.00	0.00	5.32	3.18	10.77	0.00	14.92	3.63
41	ER7a	ExonRegion	0	68.18	32.73	46.16	69.86	27.91	35.05	87.19	114.94	72.75	47.10	32.75	54.51	117.92	42.20	83.05	41.78	53.39	40.26	45.60	94.08	25.96	60.14	53.68	35.84	47.21	38.25	17.06	85.35	38.69