Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LOXL1	Gene	0	37.58	74.79	93.82	18.24	8.00	73.85	26.04	21.24	101.85	109.41	23.28	117.59	35.82	174.73	28.10	87.67	137.36	218.86	43.40	41.48	67.33	111.73	100.45	121.21	240.57	330.72	52.02	24.64	191.63
2	395162	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.18	0.00	0.00	0.00	0.34	0.00	0.00	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.17
3	261921	Transcript	0	66.92	179.54	146.98	23.45	11.22	158.64	46.87	43.48	273.38	219.01	44.64	147.67	56.85	261.93	43.59	135.11	179.10	249.75	81.54	87.42	137.90	203.34	133.95	287.82	539.08	398.41	110.30	31.00	286.71
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.68	0.00	0.00	0.00	2.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.34
5	ER1b	ExonRegion	0	26.17	24.01	37.40	6.62	2.54	41.08	14.41	5.30	31.40	55.48	6.41	50.85	11.27	93.10	14.21	56.95	67.81	173.30	19.26	22.76	35.12	62.50	66.61	52.06	101.19	182.75	11.39	11.96	79.14
6	E1_Da	NovelBoundary	0	7.37	0.00	11.46	10.35	0.00	3.45	7.32	6.52	1.52	3.67	0.00	4.04	4.46	1.02	0.00	3.14	10.56	4.62	0.00	0.00	1.68	23.92	2.22	2.33	4.96	3.73	0.00	0.00	9.97
7	E1a_E2a	KnownJunction	0	96.97	109.07	134.17	17.47	7.37	158.57	19.22	25.33	196.84	142.53	24.49	172.95	48.24	230.58	28.10	142.13	242.90	431.14	32.37	47.30	118.13	150.28	170.35	168.56	378.25	681.13	49.05	21.07	364.01
8	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.66	3.96	3.81	1.62	1.14	0.00	0.00	0.41	0.00	6.29	0.00	0.00	8.86	2.86	0.00	1.35	4.59	0.00	2.60	1.40	4.83	0.00	0.00	7.42
10	I1_AR4	ActiveIntronRegion	0	0.31	0.00	0.74	0.00	0.00	0.63	0.00	0.00	0.00	1.67	0.00	1.20	0.00	0.83	0.00	1.41	1.36	4.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.25
11	I1_AR5	ActiveIntronRegion	0	1.17	0.00	1.38	0.00	0.00	0.38	0.00	0.51	0.05	0.48	0.00	0.51	0.72	3.04	3.03	0.68	1.26	2.12	1.76	0.76	0.39	0.00	0.50	1.78	0.79	4.57	0.00	0.45	0.74
12	E2_Aa	NovelBoundary	0	0.00	0.00	1.05	0.00	0.00	1.50	0.00	0.00	1.34	0.00	0.00	1.87	0.00	1.11	0.00	3.82	1.28	4.62	0.00	4.13	1.97	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00
13	ER2a	ExonRegion	0	68.02	94.63	139.81	25.90	6.35	93.50	26.48	27.82	148.01	151.12	39.19	186.58	52.10	272.46	22.09	105.25	216.82	269.11	51.86	47.42	82.80	171.56	139.68	185.37	369.32	574.12	85.61	29.65	290.02
14	E2_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	6.12	0.00	0.00	4.31	0.00	2.15	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2a_E3a	KnownJunction	0	21.88	89.49	122.61	16.82	22.11	61.08	24.55	40.96	156.74	83.29	21.38	182.23	36.97	202.29	9.57	115.82	261.49	257.25	72.61	60.45	63.94	124.85	132.14	119.99	240.23	355.67	104.51	30.96	256.71
16	E2a_E4a	NovelJunction	0	0.00	0.00	1.49	0.00	0.00	0.00	0.00	0.00	0.00	1.76	1.49	1.54	0.00	1.09	0.00	2.91	1.35	0.00	0.00	0.00	0.00	16.53	0.00	2.81	3.86	2.19	0.00	0.00	0.00
17	I2	Intron	0	2.13	1.32	2.99	0.15	0.10	1.20	0.25	0.41	1.79	2.35	0.58	1.97	0.26	1.89	1.23	1.86	3.22	3.62	1.10	1.16	0.41	0.37	0.18	2.54	2.93	1.79	0.07	0.27	1.13
18	I2_SR1	SilentIntronRegion	0	2.26	1.45	2.98	0.17	0.00	1.30	0.28	0.30	1.89	2.40	0.62	2.11	0.29	1.96	1.42	2.09	3.34	3.56	1.01	1.15	0.47	0.42	0.17	2.59	3.12	1.82	0.09	0.29	1.22
19	I2_AR2	ActiveIntronRegion	0	1.88	0.00	0.19	0.00	0.00	1.26	0.00	0.00	0.56	0.00	0.00	0.00	0.68	0.00	0.00	0.00	0.54	3.70	3.39	0.00	0.00	0.00	0.00	1.79	0.92	0.98	0.00	0.82	0.00
20	E3_Aa	NovelBoundary	0	0.00	0.00	5.01	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	0.00	7.65	3.08	5.27	0.00	0.00	0.00	0.00	0.00	0.00	1.55	1.76	0.00	0.00	4.95
21	ER3a	ExonRegion	0	70.86	136.85	164.73	20.61	13.25	121.21	47.91	56.51	226.10	191.58	45.86	277.12	83.04	352.14	47.56	162.68	311.61	356.29	83.47	70.78	116.58	218.77	173.33	220.77	520.08	737.08	90.42	56.04	461.42
22	E3a_E4a	KnownJunction	1	69.01	190.31	186.31	56.73	14.30	131.52	45.09	55.64	289.85	213.67	54.25	317.22	86.55	398.75	63.18	176.41	297.87	440.77	121.16	61.69	111.19	229.28	142.68	251.64	510.88	819.49	78.22	74.18	444.49
23	ER4a	ExonRegion	0	52.80	162.01	214.32	49.93	20.34	125.09	43.70	56.52	243.83	182.41	53.54	295.25	88.64	371.54	49.87	161.47	310.07	349.33	106.86	77.93	117.25	222.93	170.96	246.60	486.96	701.36	146.58	56.91	384.18
24	E4_Da	NovelBoundary	0	0.00	4.65	1.45	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	3.10	0.00	0.00	2.48	0.00	8.09	0.00	0.00	6.37	0.00	2.75	1.59	3.78	0.00	0.00	1.65
25	E4a_E5a	KnownJunction	0	67.18	231.91	203.98	21.14	19.16	154.35	70.60	56.04	304.83	240.43	69.31	335.57	117.31	452.66	70.36	188.34	385.36	368.98	48.55	101.72	160.44	254.75	157.35	313.19	739.14	874.25	192.03	93.82	521.35
26	I4	Intron	0	1.13	1.97	3.07	0.00	0.43	1.32	1.94	1.13	2.94	1.64	0.00	2.43	0.11	1.70	2.32	2.05	4.44	3.45	1.68	0.35	0.37	0.47	0.16	3.39	3.13	2.89	0.00	0.00	1.05
27	I4_SR1	SilentIntronRegion	0	1.20	0.00	1.72	0.00	0.00	0.60	0.64	0.00	0.63	0.25	0.00	0.66	0.00	0.46	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.24	2.38	0.00	0.00	1.08
28	I4_SR2	SilentIntronRegion	0	0.89	2.55	3.64	0.00	0.58	1.60	2.54	1.52	3.13	1.84	0.00	2.69	0.15	1.45	2.25	2.65	4.42	4.48	1.90	0.47	0.34	0.64	0.00	4.31	3.89	3.26	0.00	0.00	1.07
29	I4_AR1	ActiveIntronRegion	0	2.08	0.44	1.34	0.00	0.00	0.44	0.00	0.00	3.19	1.42	0.00	2.09	0.00	3.31	3.66	0.44	5.62	0.71	1.48	0.00	0.70	0.00	0.89	1.03	1.20	1.54	0.00	0.00	0.98
30	E5_Aa	NovelBoundary	0	5.72	4.17	2.94	0.00	0.00	0.00	0.00	0.00	3.11	0.00	0.00	3.37	0.00	1.73	0.00	3.75	3.08	0.00	0.00	0.00	0.00	0.00	0.00	2.57	6.97	6.95	0.00	0.00	1.25
31	ER5a	ExonRegion	0	51.38	193.84	225.42	38.16	21.90	145.29	62.34	51.09	289.52	252.49	68.51	356.78	123.46	402.77	68.14	182.03	413.57	391.29	108.71	77.79	119.19	184.80	179.45	236.13	533.26	693.01	144.33	63.74	607.85
32	E5_Da	NovelBoundary	0	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
33	E5a_E6a	KnownJunction	0	66.06	197.88	249.72	53.06	25.50	250.73	79.47	90.23	442.72	332.39	96.49	339.39	122.79	496.44	116.60	165.54	412.14	494.71	121.39	142.16	231.28	274.98	209.61	375.64	867.50	932.35	90.50	86.40	631.19
34	E5a_E8a	NovelJunction	0	0.00	0.00	1.32	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E6_Aa	NovelBoundary	0	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	1.42
36	ER6a	ExonRegion	0	79.99	239.20	252.19	41.92	23.79	188.15	69.49	68.23	327.07	292.70	81.94	264.30	93.55	415.51	74.50	191.07	310.34	369.73	110.34	101.60	179.90	254.76	213.06	364.17	769.99	723.51	185.47	55.63	464.76
37	E6_Da	NovelBoundary	0	0.00	3.49	4.78	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	1.87	0.00	1.37	0.00	0.00	2.41	0.00	0.00	0.00	0.00	2.43	2.36	0.00	3.52	3.78	2.19	0.00	3.00
38	E6a_E8a	KnownJunction	0	95.91	224.05	144.98	9.06	7.07	208.45	59.50	54.05	401.79	276.90	54.22	180.24	65.50	340.66	41.26	183.06	239.03	319.41	104.98	112.80	168.18	265.21	156.76	387.66	769.18	486.69	134.28	33.83	339.41
39	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.71	0.00	0.00	0.00	0.00
40	I7_SR1	SilentIntronRegion	0	0.25	2.83	0.99	0.00	0.00	0.49	0.24	0.22	1.19	2.20	0.00	0.36	0.54	0.75	0.00	0.59	0.88	1.02	1.13	0.65	0.51	0.00	0.21	0.25	2.15	0.00	0.00	0.38	1.11
41	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.19	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
42	ER8a	ExonRegion	0	37.93	135.03	148.98	37.85	15.37	108.84	34.24	32.91	144.98	161.11	35.06	115.09	48.19	183.20	45.92	87.16	119.18	180.09	58.10	62.04	107.61	141.48	111.15	187.98	308.98	310.14	86.32	28.17	234.01