Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	B2M	Gene	0	60210.35	73941.23	15117.73	46175.70	48760.17	69592.14	151745.14	55816.24	58985.43	56059.26	53220.76	22717.87	58628.96	37042.19	55808.75	47397.53	39985.47	24039.03	35683.55	35066.51	26959.33	69613.52	26160.21	61160.28	41021.29	18976.05	52210.05	16976.04	53029.96
2	396754	Transcript	1	53.03	35.71	8.39	33.38	43.32	37.71	35.14	12.33	28.82	33.02	13.51	8.60	2.88	21.37	23.38	21.90	25.87	31.21	12.00	6.23	16.43	22.26	2.75	29.09	15.23	11.68	6.05	9.57	7.59
3	349264	Transcript	0	62120.09	76142.18	38621.61	92494.13	99290.91	65377.65	149940.61	63737.11	57199.25	56880.01	52437.60	23490.07	50718.01	42103.22	61066.16	43507.12	33426.09	24184.53	34073.44	40302.18	23362.07	69144.03	22154.33	70067.86	40084.94	13010.20	40232.23	12145.50	30703.11
4	IG41	Intergenic	0	7.70	4.93	0.65	18.84	6.61	7.48	8.81	4.02	7.02	5.33	3.10	1.78	1.95	3.06	6.19	23.59	18.37	2.55	1.91	8.93	4.27	2.53	1.36	6.55	4.50	1.47	2.91	7.93	1.10
5	IG41_SR1	SilentIntergenicRegion	0	3.09	2.98	0.13	7.74	3.24	5.69	4.00	0.56	6.07	3.13	0.73	0.85	2.41	2.00	5.19	14.66	10.97	1.43	2.58	3.93	3.41	1.12	0.67	4.48	2.14	0.39	0.34	4.68	0.81
6	IG41_AR1	ActiveIntergenicRegion	0	11.31	6.84	1.16	28.86	9.28	9.85	13.35	6.88	8.53	7.46	5.12	2.76	1.65	4.13	7.78	33.04	26.13	3.26	1.29	12.87	5.43	3.69	1.89	8.82	6.79	2.26	5.25	10.58	1.44
7	IG41_SR2	SilentIntergenicRegion	0	4.82	0.00	0.00	21.94	8.10	0.00	5.04	15.42	0.98	5.23	4.76	0.00	1.30	1.47	0.00	25.94	7.76	2.73	0.00	7.03	2.85	3.61	1.81	0.00	4.11	4.71	0.00	7.13	2.68
8	IG41_AR2	ActiveIntergenicRegion	0	3.93	0.00	0.00	7.31	9.13	0.00	0.00	7.36	0.00	3.37	3.17	0.00	0.43	0.91	0.00	8.86	4.17	0.91	0.00	6.56	1.90	2.40	0.60	0.00	1.67	4.71	0.00	4.89	0.89
9	IG41_SR3	SilentIntergenicRegion	0	9.33	2.57	0.00	9.97	7.02	0.00	3.74	2.53	1.04	2.45	2.06	0.00	1.50	1.36	0.00	4.07	3.92	4.47	2.96	10.27	0.29	2.41	1.68	1.99	1.29	1.84	0.85	8.09	0.00
10	ER1a	ExonRegion	1	59905.79	53326.87	30801.04	102691.41	112264.96	60850.69	159379.71	48596.38	47187.16	53142.48	50817.34	27879.04	77610.07	32718.31	38802.31	57050.96	62398.49	24083.08	29040.56	23258.91	31227.37	71984.71	40765.67	33734.65	37380.67	36099.40	86243.60	34224.49	106566.74
11	E1_Da	NovelBoundary	0	8.55	0.00	4.76	18.98	0.00	1.80	0.00	0.00	7.10	1.64	1.33	17.11	0.00	1.93	6.98	3.21	23.30	18.49	0.00	3.72	0.00	2.29	0.00	0.00	5.15	3.95	0.00	5.62	0.00
12	E1a_E2a	KnownJunction	0	11843.57	19274.91	22196.04	23153.90	21670.23	32156.14	90902.74	18325.14	29625.32	20456.45	14692.99	14963.52	79879.61	13986.09	17265.26	7726.37	29743.75	7346.34	7982.99	6416.79	9937.83	14900.77	6160.25	14493.11	15487.73	17283.55	14880.33	15102.95	101473.65
13	I1	Intron	0	63.61	31.96	5.10	5.65	13.27	57.37	18.02	8.40	39.11	46.68	22.53	61.36	14.24	32.70	30.06	33.81	66.84	27.28	15.77	12.61	23.84	12.90	8.85	50.37	19.71	9.68	12.27	10.89	13.36
14	I1_AR1	ActiveIntronRegion	0	64.68	32.05	5.09	6.07	12.63	55.48	18.86	8.59	40.49	46.67	21.89	61.32	14.82	32.61	31.15	34.50	67.11	27.28	15.35	13.02	23.17	13.32	9.18	51.77	19.88	10.07	12.78	11.04	13.78
15	I1_SR1	SilentIntronRegion	0	54.37	31.87	5.31	1.63	19.93	77.24	10.05	6.68	26.34	47.77	29.40	62.97	8.80	34.27	19.84	27.65	65.63	27.87	20.20	8.84	31.01	8.98	5.74	37.47	18.46	6.06	7.47	9.54	9.56
16	E2_Aa	NovelBoundary	0	81.34	67.28	2.52	0.00	5.89	95.73	42.45	15.28	40.93	128.31	63.55	92.47	6.97	42.14	51.42	28.08	128.19	43.02	24.28	15.05	33.29	11.47	0.00	39.18	30.57	14.33	9.54	21.16	6.40
17	ER2a	ExonRegion	0	81606.71	79281.48	18550.02	32125.57	41718.86	81737.76	184078.47	77542.89	62986.90	69731.87	65802.35	29811.13	86956.16	46892.00	56355.24	56405.06	54168.68	28365.25	38040.72	42204.74	32486.89	97591.67	35057.78	77703.47	56218.68	32105.21	74695.76	28005.73	92412.66
18	E2_Da	NovelBoundary	1	168.64	101.22	17.14	54.79	56.74	99.10	81.82	18.02	79.15	80.85	23.54	22.23	3.03	77.73	34.88	78.87	106.92	85.53	24.28	7.44	47.25	6.76	4.14	81.53	31.03	25.10	7.01	25.93	10.43
19	E2a_E3a	KnownJunction	0	66468.58	76282.34	58833.59	127068.77	141566.47	63785.41	147565.98	69800.43	54586.36	57673.98	51262.85	25043.03	52879.65	43760.88	60414.57	43550.51	34470.63	23962.13	31791.70	42846.27	22800.86	72830.83	22327.40	75552.28	40089.43	14410.40	42015.51	13976.61	33870.49
20	E2a_E4a	NovelJunction	0	5.19	0.00	5.13	0.00	0.00	1.65	0.00	0.00	0.00	3.40	0.00	0.00	0.00	0.00	0.00	0.00	4.32	0.00	0.00	0.00	0.00	3076.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E2_Db	NovelBoundary	0	162.68	112.95	24.42	72.69	126.44	83.53	83.59	23.54	41.72	78.01	78.93	26.72	6.08	92.44	7.97	114.90	135.03	111.22	24.28	46.48	41.84	9.43	4.88	124.24	32.73	14.59	23.56	12.85	17.33
22	ER2b	ExonRegion	0	53.03	35.71	8.39	33.38	43.32	37.71	35.14	12.33	28.82	33.02	13.51	8.60	2.88	21.37	23.38	21.90	25.87	31.21	12.00	6.23	16.43	22.26	2.75	29.09	15.23	11.68	6.05	9.57	7.59
23	I2	Intron	0	256.40	107.51	14.96	30.41	33.33	118.16	95.18	41.43	60.74	92.41	56.75	25.72	11.16	95.11	48.25	95.80	135.74	94.99	56.86	47.91	56.04	18.12	8.67	108.32	35.20	20.00	20.61	23.90	19.24
24	I2_AR1	ActiveIntronRegion	0	257.33	107.89	15.01	30.52	33.44	118.59	95.53	41.57	60.96	92.74	56.95	25.81	11.20	95.45	48.42	96.15	136.23	95.34	57.07	48.08	56.24	18.19	8.70	108.71	35.32	20.07	20.68	23.98	19.31
25	ER3a	ExonRegion	0	68276.09	72672.15	48571.94	112562.66	121324.35	63514.15	162926.36	73304.19	54453.24	60986.84	56522.27	26814.69	57062.41	48431.16	61002.06	44368.20	36660.98	25833.72	32659.35	42594.33	22833.58	77133.17	24906.26	73106.73	44353.97	15510.30	43576.89	14456.00	35121.23
26	I3	Intron	0	466.28	220.27	24.82	90.82	57.36	289.06	179.55	86.85	130.22	182.63	106.24	56.53	28.83	232.52	157.67	410.43	281.59	168.82	149.65	112.79	125.82	38.90	19.45	325.30	101.66	45.84	31.06	34.63	41.77
27	I3_AR1	ActiveIntronRegion	0	467.47	220.83	24.89	91.02	57.50	289.79	180.01	87.08	130.56	183.09	106.52	56.68	28.90	233.12	158.07	411.48	282.31	169.24	150.04	113.08	126.14	39.00	19.50	326.13	101.91	45.95	31.14	34.72	41.87
28	E4_Aa	NovelBoundary	0	343.12	335.06	21.78	70.10	56.00	319.18	145.15	35.78	247.30	240.43	71.56	63.37	58.28	257.22	321.50	560.05	390.58	198.17	218.50	138.36	132.08	34.81	9.36	441.50	129.19	62.40	57.05	25.07	61.77
29	ER4a	ExonRegion	0	51615.60	79472.05	8459.30	37850.96	34981.90	68833.38	139329.51	48106.71	62558.15	51979.22	49527.67	18612.47	42211.96	34117.62	61781.84	42602.65	29146.65	22757.73	37769.25	35465.93	24451.76	57468.11	19229.33	61544.57	35811.41	9109.90	35104.31	8003.90	23117.62
30	IG42_AR1	ActiveIntergenicRegion	0	77.54	97.70	13.47	45.31	43.62	104.25	231.52	82.26	81.12	69.52	72.88	16.52	49.98	34.60	101.27	67.48	31.55	25.25	47.27	53.20	36.09	92.32	17.36	64.21	53.26	17.46	61.87	6.04	17.64
31	IG42_AR3	ActiveIntergenicRegion	0	2.42	0.00	0.00	0.00	0.00	3.50	0.00	0.00	0.00	2.10	2.38	0.00	0.92	2.25	0.00	0.00	2.62	3.08	2.92	0.00	0.00	0.00	0.00	0.42	1.57	0.00	0.00	0.00	0.00
32	IG42_AR4	ActiveIntergenicRegion	0	136.92	73.34	44.12	219.08	200.02	91.69	216.73	103.14	50.04	119.90	94.04	47.55	89.39	91.37	60.65	136.76	74.37	45.47	33.67	173.75	68.48	254.86	73.94	90.85	103.22	54.70	67.96	52.92	71.58
33	IG42_SR3	SilentIntergenicRegion	0	4.73	5.89	0.58	0.68	3.80	5.08	6.40	2.65	3.37	3.25	2.54	1.78	2.60	1.71	8.15	5.64	5.52	3.60	0.04	4.46	2.66	3.12	0.68	5.83	2.26	1.48	0.63	2.90	2.66
34	IG42_AR5	ActiveIntergenicRegion	0	419.47	554.58	167.33	789.08	727.22	456.87	794.31	268.91	504.42	649.59	567.37	270.27	490.63	467.80	322.61	476.32	377.12	199.88	191.33	615.71	332.19	793.87	296.36	730.62	590.85	176.94	473.98	272.39	335.60
35	IG42_AR6	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.00	1.44	0.63	0.00	0.00	0.00	0.00	0.53	1.27	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00